RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 FMNL1O95466 1100 aaPredicted RBP16.2■□□□□ 0.18
VAMP2-201ENST00000316509 KIF23Q02241 960 aaPredicted RBP16.2■□□□□ 0.18
VAMP2-201ENST00000316509 CRY2Q49AN0 593 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 SBK1Q52WX2 424 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 CCDC73Q6ZRK6 1079 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 ILDR1Q86SU0 546 aaPredicted RBP16.2■□□□□ 0.18
VAMP2-201ENST00000316509 RBM17Q96I25 401 aaKnown RBP16.2■□□□□ 0.18
VAMP2-201ENST00000316509 UBAC1Q9BSL1 405 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 FAM217BQ9NTX9 383 aaPredicted RBP16.2■□□□□ 0.18
VAMP2-201ENST00000316509 BBOX1O75936 387 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
VAMP2-201ENST00000316509 CDC27P30260 824 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 GSTO1P78417 241 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 MECOMQ03112 1051 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 MYSM1Q5VVJ2 828 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 PRR5LQ6MZQ0 368 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 TMC4Q7Z404 712 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 TRIM22Q8IYM9 498 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 RRAGDQ9NQL2 400 aaPredicted RBP16.2■□□□□ 0.18
VAMP2-201ENST00000316509 TACC3Q9Y6A5 838 aa16.2■□□□□ 0.18
VAMP2-201ENST00000316509 GYS1P13807 737 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 ATP2B4P23634 1241 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 GUCY1B3Q02153 619 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 KRT27Q7Z3Y8 459 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 ZNF804AQ7Z570 1209 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 MICU3Q86XE3 530 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 CCAR1Q8IX12 1150 aaKnown RBP16.19■□□□□ 0.18
VAMP2-201ENST00000316509 LINC00301Q8NCQ3 95 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 TDRD7Q8NHU6 1098 aaKnown RBP16.19■□□□□ 0.18
VAMP2-201ENST00000316509 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
VAMP2-201ENST00000316509 TOMM22Q9NS69 142 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 MYH15Q9Y2K3 1946 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 MINDY4BA8MYZ0 360 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 ORC4O43929 436 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 CALM1P0DP23 149 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 CALM2P0DP24 149 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 CALM3P0DP25 149 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 RTN1Q16799 776 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 RRP12Q5JTH9 1297 aaKnown RBP16.19■□□□□ 0.18
VAMP2-201ENST00000316509 SASS6Q6UVJ0 657 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 FAM200AQ8TCP9 573 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 TFCP2L1Q9NZI6 479 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 ANKIB1Q9P2G1 1089 aa16.19■□□□□ 0.18
VAMP2-201ENST00000316509 ARPP21Q9UBL0 812 aaPredicted RBP16.19■□□□□ 0.18
VAMP2-201ENST00000316509 WTIPA6NIX2 430 aaPredicted RBP16.18■□□□□ 0.18
VAMP2-201ENST00000316509 NR1I2O75469 434 aa16.18■□□□□ 0.18
VAMP2-201ENST00000316509 SERPINB2P05120 415 aa16.18■□□□□ 0.18
VAMP2-201ENST00000316509 LDHCP07864 332 aa16.18■□□□□ 0.18
VAMP2-201ENST00000316509 FOSBP53539 338 aa16.18■□□□□ 0.18
VAMP2-201ENST00000316509 FAM160A1Q05DH4 1040 aa16.18■□□□□ 0.18
VAMP2-201ENST00000316509 STK38Q15208 465 aa16.18■□□□□ 0.18
VAMP2-201ENST00000316509 SEC23AQ15436 765 aa16.18■□□□□ 0.18
VAMP2-201ENST00000316509 IQCA1Q86XH1 822 aa16.18■□□□□ 0.18
VAMP2-201ENST00000316509 NKX2-3Q8TAU0 364 aa16.18■□□□□ 0.18
VAMP2-201ENST00000316509 SDR42E1Q8WUS8 393 aa16.18■□□□□ 0.18
VAMP2-201ENST00000316509 INCENPQ9NQS7 918 aa16.18■□□□□ 0.18
VAMP2-201ENST00000316509 U2AF2P26368 475 aaKnown RBP eCLIP16.17■□□□□ 0.186e-9■□□□□ 11.2
VAMP2-201ENST00000316509 HOXA10P31260 410 aaPredicted RBP16.17■□□□□ 0.18
VAMP2-201ENST00000316509 ME1P48163 572 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 DYNLL1P63167 89 aaKnown RBP16.17■□□□□ 0.18
VAMP2-201ENST00000316509 TYRO3Q06418 890 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 SF3A1Q15459 793 aaKnown RBP16.17■□□□□ 0.18
VAMP2-201ENST00000316509 KRT40Q6A162 431 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 ZNF384Q8TF68 577 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 CRAMP1Q96RY5 1269 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 ANO8Q9HCE9 1232 aaPredicted RBP16.17■□□□□ 0.18
VAMP2-201ENST00000316509 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
VAMP2-201ENST00000316509 NOL7Q9UMY1 257 aaKnown RBP16.17■□□□□ 0.18
VAMP2-201ENST00000316509 CHD4Q14839 1912 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 DEXIO95424 95 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 TPRNQ4KMQ1 711 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 CTR9Q6PD62 1173 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 JMYQ8N9B5 988 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 FANCBQ8NB91 859 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 ENGASEQ8NFI3 743 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 ZSCAN10Q96SZ4 725 aaPredicted RBP16.17■□□□□ 0.18
VAMP2-201ENST00000316509 SENP2Q9HC62 589 aa16.17■□□□□ 0.18
VAMP2-201ENST00000316509 RBM28Q9NW13 759 aaKnown RBP16.17■□□□□ 0.18
VAMP2-201ENST00000316509 KLRG2A4D1S0 409 aaPredicted RBP16.16■□□□□ 0.18
VAMP2-201ENST00000316509 SPTLC2O15270 562 aa16.16■□□□□ 0.18
VAMP2-201ENST00000316509 KLRK1P26718 216 aa16.16■□□□□ 0.18
VAMP2-201ENST00000316509 CEBPZQ03701 1054 aaKnown RBP16.16■□□□□ 0.18
VAMP2-201ENST00000316509 SAFBQ15424 915 aaKnown RBP eCLIP16.16■□□□□ 0.18
VAMP2-201ENST00000316509 ZNF654Q8IZM8 581 aa16.16■□□□□ 0.18
VAMP2-201ENST00000316509 MRPS27Q92552 414 aaKnown RBP16.16■□□□□ 0.18
VAMP2-201ENST00000316509 PCDHA7Q9UN72 937 aa16.16■□□□□ 0.18
VAMP2-201ENST00000316509 MAST2Q6P0Q8 1798 aa16.16■□□□□ 0.18
VAMP2-201ENST00000316509 TAF1P21675 1872 aa16.16■□□□□ 0.18
VAMP2-201ENST00000316509 KINO60870 393 aaKnown RBP16.16■□□□□ 0.18
VAMP2-201ENST00000316509 PPP6R2O75170 966 aa16.16■□□□□ 0.18
VAMP2-201ENST00000316509 BAG3O95817 575 aa16.16■□□□□ 0.18
VAMP2-201ENST00000316509 MSNP26038 577 aaKnown RBP16.16■□□□□ 0.18
VAMP2-201ENST00000316509 PPP4CP60510 307 aa16.16■□□□□ 0.18
VAMP2-201ENST00000316509 CCDC178Q5BJE1 867 aa16.16■□□□□ 0.18
VAMP2-201ENST00000316509 DZIP1Q86YF9 867 aaKnown RBP16.16■□□□□ 0.18
VAMP2-201ENST00000316509 RAB11FIP4Q86YS3 637 aa16.16■□□□□ 0.18
VAMP2-201ENST00000316509 CRACR2BQ8N4Y2 399 aaPredicted RBP16.16■□□□□ 0.18
VAMP2-201ENST00000316509 PODXL2Q9NZ53 605 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms