RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 INCENPQ9NQS7 918 aa26.61■■□□□ 1.85
IRF3-201ENST00000309877 WDR19Q8NEZ3 1342 aa26.61■■□□□ 1.85
IRF3-201ENST00000309877 SCN9AQ15858 1988 aa26.6■■□□□ 1.85
IRF3-201ENST00000309877 CYP2D7A0A087X1C5 515 aa26.6■■□□□ 1.85
IRF3-201ENST00000309877 RAD17O75943 681 aa26.6■■□□□ 1.85
IRF3-201ENST00000309877 SLC3A2P08195 630 aaKnown RBP26.6■■□□□ 1.85
IRF3-201ENST00000309877 HDLBPQ00341 1268 aaKnown RBP26.6■■□□□ 1.85
IRF3-201ENST00000309877 JDP2Q8WYK2 163 aa26.6■■□□□ 1.85
IRF3-201ENST00000309877 CHMP5Q9NZZ3 219 aa26.6■■□□□ 1.85
IRF3-201ENST00000309877 LARGE1O95461 756 aa26.6■■□□□ 1.85
IRF3-201ENST00000309877 ME3Q16798 604 aa26.6■■□□□ 1.85
IRF3-201ENST00000309877 RRP12Q5JTH9 1297 aaKnown RBP26.6■■□□□ 1.85
IRF3-201ENST00000309877 MAPKAPK5Q8IW41 473 aa26.6■■□□□ 1.85
IRF3-201ENST00000309877 MKRN1Q9UHC7 482 aaKnown RBP26.6■■□□□ 1.85
IRF3-201ENST00000309877 MYO3BQ8WXR4 1341 aa26.6■■□□□ 1.85
IRF3-201ENST00000309877 TIAM2Q8IVF5 1701 aa26.59■■□□□ 1.85
IRF3-201ENST00000309877 RBM5P52756 815 aaKnown RBP eCLIP26.59■■□□□ 1.85
IRF3-201ENST00000309877 RSBN1LQ6PCB5 846 aaPredicted RBP26.59■■□□□ 1.85
IRF3-201ENST00000309877 AGXT2Q9BYV1 514 aa26.59■■□□□ 1.85
IRF3-201ENST00000309877 FHDC1Q9C0D6 1143 aaPredicted RBP26.59■■□□□ 1.85
IRF3-201ENST00000309877 TACC3Q9Y6A5 838 aa26.59■■□□□ 1.85
IRF3-201ENST00000309877 PSMD14O00487 310 aa26.58■■□□□ 1.85
IRF3-201ENST00000309877 USP17L8P0C7I0 530 aa26.58■■□□□ 1.85
IRF3-201ENST00000309877 DDIT3P35638 169 aa26.58■■□□□ 1.85
IRF3-201ENST00000309877 ANTXR2P58335 489 aa26.58■■□□□ 1.85
IRF3-201ENST00000309877 FBXL16Q8N461 479 aa26.58■■□□□ 1.85
IRF3-201ENST00000309877 ZDHHC15Q96MV8 337 aa26.58■■□□□ 1.85
IRF3-201ENST00000309877 USP40Q9NVE5 1235 aa26.58■■□□□ 1.85
IRF3-201ENST00000309877 LTBP3Q9NS15 1303 aa26.57■■□□□ 1.84
IRF3-201ENST00000309877 KDM4AO75164 1064 aa26.57■■□□□ 1.84
IRF3-201ENST00000309877 VIL1P09327 827 aaKnown RBP26.57■■□□□ 1.84
IRF3-201ENST00000309877 PCP11498 1178 aaKnown RBP26.57■■□□□ 1.84
IRF3-201ENST00000309877 CYB5R4Q7L1T6 521 aa26.57■■□□□ 1.84
IRF3-201ENST00000309877 CCDC83Q8IWF9 413 aa26.57■■□□□ 1.84
IRF3-201ENST00000309877 SERPINA10Q9UK55 444 aa26.57■■□□□ 1.84
IRF3-201ENST00000309877 CIZ1Q9ULV3 898 aaPredicted RBP26.57■■□□□ 1.84
IRF3-201ENST00000309877 COL4A5P29400 1685 aa26.57■■□□□ 1.84
IRF3-201ENST00000309877 FER1L6Q2WGJ9 1857 aa26.57■■□□□ 1.84
IRF3-201ENST00000309877 CYP2D6P10635 497 aa26.57■■□□□ 1.84
IRF3-201ENST00000309877 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.57■■□□□ 1.84
IRF3-201ENST00000309877 POLR3DP05423 398 aaPredicted RBP26.56■■□□□ 1.84
IRF3-201ENST00000309877 APOBRQ0VD83 1088 aa26.56■■□□□ 1.84
IRF3-201ENST00000309877 C12orf60Q5U649 245 aa26.56■■□□□ 1.84
IRF3-201ENST00000309877 APOBEC3HQ6NTF7 200 aaKnown RBP26.56■■□□□ 1.84
IRF3-201ENST00000309877 ZSWIM5Q9P217 1185 aa26.56■■□□□ 1.84
IRF3-201ENST00000309877 BAZ2AQ9UIF9 1905 aaKnown RBP26.55■■□□□ 1.84
IRF3-201ENST00000309877 FLT1P17948 1338 aa26.55■■□□□ 1.84
IRF3-201ENST00000309877 SMIM22K7EJ46 135 aa26.55■■□□□ 1.84
IRF3-201ENST00000309877 NECAB1Q8N987 351 aa26.55■■□□□ 1.84
IRF3-201ENST00000309877 ESR2Q92731 530 aa26.55■■□□□ 1.84
IRF3-201ENST00000309877 TMEM87BQ96K49 555 aa26.55■■□□□ 1.84
IRF3-201ENST00000309877 SAP30BPQ9UHR5 308 aaKnown RBP26.55■■□□□ 1.84
IRF3-201ENST00000309877 PDE4BQ07343 736 aa26.54■■□□□ 1.84
IRF3-201ENST00000309877 STK3Q13188 491 aa26.54■■□□□ 1.84
IRF3-201ENST00000309877 SLC4A8Q2Y0W8 1093 aa26.54■■□□□ 1.84
IRF3-201ENST00000309877 CDC42EP5Q6NZY7 148 aa26.54■■□□□ 1.84
IRF3-201ENST00000309877 NKX2-3Q8TAU0 364 aa26.54■■□□□ 1.84
IRF3-201ENST00000309877 NAP1L2Q9ULW6 460 aaPredicted RBP26.54■■□□□ 1.84
IRF3-201ENST00000309877 RASSF7Q02833 373 aa26.54■■□□□ 1.84
IRF3-201ENST00000309877 GPHNQ9NQX3 736 aaPredicted RBP26.54■■□□□ 1.84
IRF3-201ENST00000309877 HDAC9Q9UKV0 1011 aa26.54■■□□□ 1.84
IRF3-201ENST00000309877 ZNF646O15015 1829 aaPredicted RBP26.53■■□□□ 1.84
IRF3-201ENST00000309877 FGRP09769 529 aa26.53■■□□□ 1.84
IRF3-201ENST00000309877 CXCL9Q07325 125 aa26.53■■□□□ 1.84
IRF3-201ENST00000309877 PICALMQ13492 652 aa26.53■■□□□ 1.84
IRF3-201ENST00000309877 CIAPIN1Q6FI81 312 aa26.53■■□□□ 1.84
IRF3-201ENST00000309877 ANGEL1Q9UNK9 670 aaKnown RBP26.53■■□□□ 1.84
IRF3-201ENST00000309877 SART3Q15020 963 aaKnown RBP26.52■■□□□ 1.84
IRF3-201ENST00000309877 ZNF274Q96GC6 653 aaPredicted RBP26.52■■□□□ 1.84
IRF3-201ENST00000309877 SMC3Q9UQE7 1217 aa26.52■■□□□ 1.84
IRF3-201ENST00000309877 SH2B2O14492 632 aaPredicted RBP26.51■■□□□ 1.83
IRF3-201ENST00000309877 IFIT3O14879 490 aaKnown RBP26.51■■□□□ 1.83
IRF3-201ENST00000309877 RANBP6O60518 1105 aaKnown RBP26.51■■□□□ 1.83
IRF3-201ENST00000309877 PRDM1O75626 825 aa26.51■■□□□ 1.83
IRF3-201ENST00000309877 EVX2Q03828 476 aa26.51■■□□□ 1.83
IRF3-201ENST00000309877 TMEM67Q5HYA8 995 aa26.51■■□□□ 1.83
IRF3-201ENST00000309877 OGFOD1Q8N543 542 aa26.51■■□□□ 1.83
IRF3-201ENST00000309877 AGBL3Q8NEM8 1001 aa26.51■■□□□ 1.83
IRF3-201ENST00000309877 GMLQ99445 158 aa26.51■■□□□ 1.83
IRF3-201ENST00000309877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.51■■□□□ 1.83
IRF3-201ENST00000309877 ORC4O43929 436 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 WDHD1O75717 1129 aaPredicted RBP26.5■■□□□ 1.83
IRF3-201ENST00000309877 EVCP57679 992 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 TNIP1Q15025 636 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 CFAP100Q494V2 611 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 IGDCC4Q8TDY8 1250 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 MTA3Q9BTC8 594 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 ZBTB12Q9Y330 459 aaPredicted RBP26.5■■□□□ 1.83
IRF3-201ENST00000309877 PSME4Q14997 1843 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 ERICH2A1L162 156 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 PFKFB2O60825 505 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 ST3GAL1Q11201 340 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 GTF3C6Q969F1 213 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 UBAC1Q9BSL1 405 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 SYT17Q9BSW7 474 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 PCDHAC2Q9Y5I4 1007 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 NAV1Q8NEY1 1877 aa26.5■■□□□ 1.83
IRF3-201ENST00000309877 ARFGEF1Q9Y6D6 1849 aa26.49■■□□□ 1.83
IRF3-201ENST00000309877 LAMB1P07942 1786 aa26.49■■□□□ 1.83
IRF3-201ENST00000309877 KLF18A0A0U1RQI7 1052 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms