RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 DCAF15Q66K64 600 aa21.47■■□□□ 1.03
SSSCA1-201ENST00000309328 NACAP1Q9BZK3 213 aa21.47■■□□□ 1.03
SSSCA1-201ENST00000309328 ARMT1Q9H993 441 aa21.47■■□□□ 1.03
SSSCA1-201ENST00000309328 UNCXA6NJT0 531 aa21.46■■□□□ 1.03
SSSCA1-201ENST00000309328 PPP1R12BO60237 982 aaPredicted RBP21.46■■□□□ 1.03
SSSCA1-201ENST00000309328 HLA-DOAP06340 250 aa21.46■■□□□ 1.03
SSSCA1-201ENST00000309328 TCP10Q12799 353 aa21.46■■□□□ 1.03
SSSCA1-201ENST00000309328 ZSCAN29Q8IWY8 852 aaPredicted RBP21.46■■□□□ 1.03
SSSCA1-201ENST00000309328 TEPSINQ96N21 525 aa21.46■■□□□ 1.03
SSSCA1-201ENST00000309328 TMEM39BQ9GZU3 492 aa21.46■■□□□ 1.03
SSSCA1-201ENST00000309328 DDX4Q9NQI0 724 aaKnown RBP21.46■■□□□ 1.03
SSSCA1-201ENST00000309328 SLC4A4Q9Y6R1 1079 aa21.46■■□□□ 1.03
SSSCA1-201ENST00000309328 MYH7P12883 1935 aa21.46■■□□□ 1.03
SSSCA1-201ENST00000309328 CELF2O95319 508 aaKnown RBP21.45■■□□□ 1.02
SSSCA1-201ENST00000309328 C1QTNF8P60827 252 aa21.45■■□□□ 1.02
SSSCA1-201ENST00000309328 NMIQ13287 307 aaPredicted RBP21.45■■□□□ 1.02
SSSCA1-201ENST00000309328 TTC6Q86TZ1 520 aa21.45■■□□□ 1.02
SSSCA1-201ENST00000309328 C2orf69Q8N8R5 385 aa21.45■■□□□ 1.02
SSSCA1-201ENST00000309328 CSRNP1Q96S65 589 aa21.45■■□□□ 1.02
SSSCA1-201ENST00000309328 MYO5AQ9Y4I1 1855 aaKnown RBP21.45■■□□□ 1.02
SSSCA1-201ENST00000309328 M0R2C6 588 aa21.44■■□□□ 1.02
SSSCA1-201ENST00000309328 TRAF5O00463 557 aa21.44■■□□□ 1.02
SSSCA1-201ENST00000309328 APLP1P51693 650 aa21.44■■□□□ 1.02
SSSCA1-201ENST00000309328 CWC27Q6UX04 472 aaKnown RBP21.44■■□□□ 1.02
SSSCA1-201ENST00000309328 MAPKAPK5Q8IW41 473 aa21.44■■□□□ 1.02
SSSCA1-201ENST00000309328 DCP1AQ9NPI6 582 aaPredicted RBP21.44■■□□□ 1.02
SSSCA1-201ENST00000309328 PI4KBQ9UBF8 816 aa21.44■■□□□ 1.02
SSSCA1-201ENST00000309328 MKRN1Q9UHC7 482 aaKnown RBP21.44■■□□□ 1.02
SSSCA1-201ENST00000309328 A0A0D9SFI3 127 aa21.43■■□□□ 1.02
SSSCA1-201ENST00000309328 TMEM88BA6NKF7 163 aa21.43■■□□□ 1.02
SSSCA1-201ENST00000309328 PATL2C9JE40 543 aaKnown RBP21.43■■□□□ 1.02
SSSCA1-201ENST00000309328 CHGBP05060 677 aa21.43■■□□□ 1.02
SSSCA1-201ENST00000309328 CHMLP26374 656 aa21.43■■□□□ 1.02
SSSCA1-201ENST00000309328 SLFNL1Q499Z3 407 aa21.43■■□□□ 1.02
SSSCA1-201ENST00000309328 ARMC9Q7Z3E5 817 aa21.43■■□□□ 1.02
SSSCA1-201ENST00000309328 FAM227BQ96M60 508 aa21.43■■□□□ 1.02
SSSCA1-201ENST00000309328 GBA2Q9HCG7 927 aaPredicted RBP21.43■■□□□ 1.02
SSSCA1-201ENST00000309328 ARPP21Q9UBL0 812 aaPredicted RBP21.43■■□□□ 1.02
SSSCA1-201ENST00000309328 HERC5Q9UII4 1024 aaKnown RBP21.43■■□□□ 1.02
SSSCA1-201ENST00000309328 CCDC171Q6TFL3 1326 aa21.43■■□□□ 1.02
SSSCA1-201ENST00000309328 TBC1D12O60347 775 aa21.42■■□□□ 1.02
SSSCA1-201ENST00000309328 CDC45O75419 566 aa21.42■■□□□ 1.02
SSSCA1-201ENST00000309328 NBPF12Q5TAG4 269 aaPredicted RBP21.42■■□□□ 1.02
SSSCA1-201ENST00000309328 FOXP4Q8IVH2 680 aaPredicted RBP21.42■■□□□ 1.02
SSSCA1-201ENST00000309328 EHD4Q9H223 541 aa21.42■■□□□ 1.02
SSSCA1-201ENST00000309328 CREBZFQ9NS37 354 aa21.42■■□□□ 1.02
SSSCA1-201ENST00000309328 MCM9Q9NXL9 1143 aa21.42■■□□□ 1.02
SSSCA1-201ENST00000309328 EIF5BO60841 1220 aaKnown RBP21.41■■□□□ 1.02
SSSCA1-201ENST00000309328 APPP05067 770 aa21.41■■□□□ 1.02
SSSCA1-201ENST00000309328 IREB2P48200 963 aaKnown RBP21.41■■□□□ 1.02
SSSCA1-201ENST00000309328 MAP3K10Q02779 954 aa21.41■■□□□ 1.02
SSSCA1-201ENST00000309328 MAP3K11Q16584 847 aa21.41■■□□□ 1.02
SSSCA1-201ENST00000309328 SKAP1Q86WV1 359 aa21.41■■□□□ 1.02
SSSCA1-201ENST00000309328 SDR42E1Q8WUS8 393 aa21.41■■□□□ 1.02
SSSCA1-201ENST00000309328 SEC62Q99442 399 aaKnown RBP21.41■■□□□ 1.02
SSSCA1-201ENST00000309328 TRIM34Q9BYJ4 488 aa21.41■■□□□ 1.02
SSSCA1-201ENST00000309328 ZNF408Q9H9D4 720 aa21.41■■□□□ 1.02
SSSCA1-201ENST00000309328 SCAF8Q9UPN6 1271 aaKnown RBP21.41■■□□□ 1.02
SSSCA1-201ENST00000309328 ZMYM6O95789 1325 aa21.4■■□□□ 1.02
SSSCA1-201ENST00000309328 GSG1L2A8MUP6 293 aa21.4■■□□□ 1.02
SSSCA1-201ENST00000309328 POLR3DP05423 398 aaPredicted RBP21.4■■□□□ 1.02
SSSCA1-201ENST00000309328 ALX1Q15699 326 aa21.4■■□□□ 1.02
SSSCA1-201ENST00000309328 ZFPM1Q8IX07 1006 aa21.4■■□□□ 1.02
SSSCA1-201ENST00000309328 HHIPL1Q96JK4 782 aa21.4■■□□□ 1.02
SSSCA1-201ENST00000309328 ZNF341Q9BYN7 854 aa21.4■■□□□ 1.02
SSSCA1-201ENST00000309328 DDTLA6NHG4 134 aaPredicted RBP21.39■■□□□ 1.01
SSSCA1-201ENST00000309328 TDO2P48775 406 aa21.39■■□□□ 1.01
SSSCA1-201ENST00000309328 TTLL12Q14166 644 aaPredicted RBP21.39■■□□□ 1.01
SSSCA1-201ENST00000309328 SBK1Q52WX2 424 aa21.39■■□□□ 1.01
SSSCA1-201ENST00000309328 PRAMEF18Q5VWM3 479 aa21.39■■□□□ 1.01
SSSCA1-201ENST00000309328 CST9Q5W186 159 aa21.39■■□□□ 1.01
SSSCA1-201ENST00000309328 METTL16Q86W50 562 aaKnown RBP21.39■■□□□ 1.01
SSSCA1-201ENST00000309328 NAPBQ9H115 298 aa21.39■■□□□ 1.01
SSSCA1-201ENST00000309328 PRKAB2O43741 272 aa21.38■■□□□ 1.01
SSSCA1-201ENST00000309328 SH3BP5LQ7L8J4 393 aa21.38■■□□□ 1.01
SSSCA1-201ENST00000309328 CRACR2BQ8N4Y2 399 aaPredicted RBP21.38■■□□□ 1.01
SSSCA1-201ENST00000309328 DSCC1Q9BVC3 393 aa21.38■■□□□ 1.01
SSSCA1-201ENST00000309328 ZNF287Q9HBT7 754 aa21.38■■□□□ 1.01
SSSCA1-201ENST00000309328 SERPINB13Q9UIV8 391 aa21.38■■□□□ 1.01
SSSCA1-201ENST00000309328 PALD1Q9ULE6 856 aa21.38■■□□□ 1.01
SSSCA1-201ENST00000309328 PAPPA2Q9BXP8 1791 aa21.38■■□□□ 1.01
SSSCA1-201ENST00000309328 AK9Q5TCS8 1911 aa21.37■■□□□ 1.01
SSSCA1-201ENST00000309328 SGSM2O43147 1006 aa21.37■■□□□ 1.01
SSSCA1-201ENST00000309328 SLC3A2P08195 630 aaKnown RBP21.37■■□□□ 1.01
SSSCA1-201ENST00000309328 HSPD1P10809 573 aaKnown RBP21.37■■□□□ 1.01
SSSCA1-201ENST00000309328 HSPA6P17066 643 aa21.37■■□□□ 1.01
SSSCA1-201ENST00000309328 ZNF589Q86UQ0 364 aaPredicted RBP21.37■■□□□ 1.01
SSSCA1-201ENST00000309328 IFNL3Q8IZI9 196 aa21.37■■□□□ 1.01
SSSCA1-201ENST00000309328 SWAP70Q9UH65 585 aa21.37■■□□□ 1.01
SSSCA1-201ENST00000309328 SAP30BPQ9UHR5 308 aaKnown RBP21.37■■□□□ 1.01
SSSCA1-201ENST00000309328 TLL2Q9Y6L7 1015 aa21.37■■□□□ 1.01
SSSCA1-201ENST00000309328 SSC5DA1L4H1 1573 aa21.36■■□□□ 1.01
SSSCA1-201ENST00000309328 C12orf60Q5U649 245 aa21.36■■□□□ 1.01
SSSCA1-201ENST00000309328 CCDC129Q6ZRS4 1044 aa21.36■■□□□ 1.01
SSSCA1-201ENST00000309328 KIAA1211Q6ZU35 1233 aa21.36■■□□□ 1.01
SSSCA1-201ENST00000309328 ANKRD13AQ8IZ07 590 aa21.36■■□□□ 1.01
SSSCA1-201ENST00000309328 KLRG1Q96E93 195 aa21.36■■□□□ 1.01
SSSCA1-201ENST00000309328 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.36■■□□□ 1.01
SSSCA1-201ENST00000309328 GINM1Q9NU53 330 aa21.36■■□□□ 1.01
SSSCA1-201ENST00000309328 CTNNA3Q9UI47 895 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms