RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 SPATA31E1Q6ZUB1 1445 aa17.18■□□□□ 0.34
LEMD3-201ENST00000308330 H0YIN7 160 aa17.18■□□□□ 0.34
LEMD3-201ENST00000308330 DNAJC8O75937 253 aaPredicted RBP17.18■□□□□ 0.34
LEMD3-201ENST00000308330 SCP2P22307 547 aa17.18■□□□□ 0.34
LEMD3-201ENST00000308330 FERMT3Q86UX7 667 aa17.18■□□□□ 0.34
LEMD3-201ENST00000308330 PUF60Q9UHX1 559 aaKnown RBP17.18■□□□□ 0.34
LEMD3-201ENST00000308330 DYNC1I2Q13409 638 aaKnown RBP17.18■□□□□ 0.34
LEMD3-201ENST00000308330 KIAA1524Q8TCG1 905 aa17.18■□□□□ 0.34
LEMD3-201ENST00000308330 UIMC1Q96RL1 719 aa17.18■□□□□ 0.34
LEMD3-201ENST00000308330 VAT1LQ9HCJ6 419 aa17.18■□□□□ 0.34
LEMD3-201ENST00000308330 HMGB1P1B2RPK0 211 aaPredicted RBP17.18■□□□□ 0.34
LEMD3-201ENST00000308330 SLC30A9Q6PML9 568 aa17.18■□□□□ 0.34
LEMD3-201ENST00000308330 NSRP1Q9H0G5 558 aaKnown RBP17.18■□□□□ 0.34
LEMD3-201ENST00000308330 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
LEMD3-201ENST00000308330 PYCARDQ9ULZ3 195 aa17.18■□□□□ 0.34
LEMD3-201ENST00000308330 DYTNA2CJ06 578 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 RASIP1Q5U651 963 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 CCDC65Q8IXS2 484 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 FAM71BQ8TC56 605 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 PRDM15P57071 1507 aaPredicted RBP17.17■□□□□ 0.34
LEMD3-201ENST00000308330 KCNQ3O43525 872 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 EIF4A1P60842 406 aaKnown RBP17.17■□□□□ 0.34
LEMD3-201ENST00000308330 FAM160A1Q05DH4 1040 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 TRIM68Q6AZZ1 485 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 FAM196AQ6ZSG2 479 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 CATIPQ7Z7H3 387 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 PRM3Q9NNZ6 103 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 ADAM21Q9UKJ8 722 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 PREX2Q70Z35 1606 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 GBP1P32455 592 aa17.17■□□□□ 0.34
LEMD3-201ENST00000308330 ITGA6P23229 1130 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 CLCN6P51797 869 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 SEC62Q99442 399 aaKnown RBP17.16■□□□□ 0.34
LEMD3-201ENST00000308330 GJA3Q9Y6H8 435 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 LOC102724428A0A0B4J2F2 783 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 UFL1O94874 794 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 PDE1AP54750 535 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 SIK1P57059 783 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 USP6NLQ92738 828 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 DTNBP1Q96EV8 351 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 ANTXR1Q9H6X2 564 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 PPFIA3O75145 1194 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 PPFIA2O75334 1257 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 KRT27Q7Z3Y8 459 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 SMARCC2Q8TAQ2 1214 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 ANKRD7Q92527 254 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 CCDC113Q9H0I3 377 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 PDE8AO60658 829 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 PDE1CQ14123 709 aaPredicted RBP17.16■□□□□ 0.34
LEMD3-201ENST00000308330 BMP2KLQ5H9B9 411 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 TAOK3Q9H2K8 898 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 SLC4A4Q9Y6R1 1079 aa17.16■□□□□ 0.34
LEMD3-201ENST00000308330 WDR17Q8IZU2 1322 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 TIMM10P62072 90 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 TFCP2Q12800 502 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 GNPTABQ3T906 1256 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 TMEM67Q5HYA8 995 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 CACNA2D3Q8IZS8 1091 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 LARP6Q9BRS8 491 aaKnown RBP17.15■□□□□ 0.34
LEMD3-201ENST00000308330 BMP2KQ9NSY1 1161 aaPredicted RBP17.15■□□□□ 0.34
LEMD3-201ENST00000308330 TMEM63CQ9P1W3 806 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 HHATQ5VTY9 493 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 IFT74Q96LB3 600 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 PDE11AQ9HCR9 933 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 CCT2P78371 535 aaKnown RBP17.15■□□□□ 0.34
LEMD3-201ENST00000308330 CRYMQ14894 314 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 MORC4Q8TE76 937 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 GOLGA8BA8MQT2 603 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 TYRO3Q06418 890 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 KLHL23Q8NBE8 558 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 DACH1Q9UI36 760 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 ASAP1Q9ULH1 1129 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 ABCC3O15438 1527 aa17.15■□□□□ 0.34
LEMD3-201ENST00000308330 GOLGA8AA7E2F4 631 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 PDE6BP35913 854 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 PRPHP41219 470 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 SLFNL1Q499Z3 407 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 NBPF10Q6P3W6 841 aaKnown RBP17.14■□□□□ 0.33
LEMD3-201ENST00000308330 USH1CQ9Y6N9 552 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 PPP1R12BO60237 982 aaPredicted RBP17.14■□□□□ 0.33
LEMD3-201ENST00000308330 TRIM21P19474 475 aaKnown RBP17.14■□□□□ 0.33
LEMD3-201ENST00000308330 MICU3Q86XE3 530 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 ZNF710Q8N1W2 664 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 CEP63Q96MT8 703 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 RNF123Q5XPI4 1314 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 GIGYF1O75420 1035 aaPredicted RBP17.14■□□□□ 0.33
LEMD3-201ENST00000308330 TPP2P29144 1249 aaPredicted RBP17.14■□□□□ 0.33
LEMD3-201ENST00000308330 PAFAH1B1P43034 410 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 KMT5BQ4FZB7 885 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 CEP85Q6P2H3 762 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 UNC5CLQ8IV45 518 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 C16orf71Q8IYS4 520 aaPredicted RBP17.14■□□□□ 0.33
LEMD3-201ENST00000308330 ARL10Q8N8L6 244 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 ZBTB10Q96DT7 871 aa17.14■□□□□ 0.33
LEMD3-201ENST00000308330 EFCAB8A8MWE9 144 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 EYA2O00167 538 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 GNGT1P63211 74 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 CKAP4Q07065 602 aaKnown RBP17.13■□□□□ 0.33
LEMD3-201ENST00000308330 TTC22Q5TAA0 569 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 TBC1D9Q6ZT07 1266 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms