RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 MS4A4AQ96JQ5 239 aa20.86■□□□□ 0.93
HMGCLL1-202ENST00000308161 NOL10Q9BSC4 688 aaKnown RBP20.86■□□□□ 0.93
HMGCLL1-202ENST00000308161 ZBTB40Q9NUA8 1239 aa20.86■□□□□ 0.93
HMGCLL1-202ENST00000308161 RFX7Q2KHR2 1363 aa20.85■□□□□ 0.93
HMGCLL1-202ENST00000308161 HMMRO75330 724 aa20.85■□□□□ 0.93
HMGCLL1-202ENST00000308161 CYP2E1P05181 493 aaPredicted RBP20.85■□□□□ 0.93
HMGCLL1-202ENST00000308161 CRHR2Q13324 411 aa20.85■□□□□ 0.93
HMGCLL1-202ENST00000308161 HSP90AB4PQ58FF6 505 aa20.85■□□□□ 0.93
HMGCLL1-202ENST00000308161 NAA16Q6N069 864 aaPredicted RBP20.85■□□□□ 0.93
HMGCLL1-202ENST00000308161 RPAP2Q8IXW5 612 aaPredicted RBP20.85■□□□□ 0.93
HMGCLL1-202ENST00000308161 CFHR5Q9BXR6 569 aa20.85■□□□□ 0.93
HMGCLL1-202ENST00000308161 TESPA1A2RU30 521 aaPredicted RBP20.84■□□□□ 0.93
HMGCLL1-202ENST00000308161 DDTLA6NHG4 134 aaPredicted RBP20.84■□□□□ 0.93
HMGCLL1-202ENST00000308161 IRF6O14896 467 aa20.84■□□□□ 0.93
HMGCLL1-202ENST00000308161 RHBDL3P58872 404 aa20.84■□□□□ 0.93
HMGCLL1-202ENST00000308161 SH3BP5LQ7L8J4 393 aa20.84■□□□□ 0.93
HMGCLL1-202ENST00000308161 CHMP4BQ9H444 224 aaKnown RBP20.84■□□□□ 0.93
HMGCLL1-202ENST00000308161 NDUFB9Q9Y6M9 179 aa20.84■□□□□ 0.93
HMGCLL1-202ENST00000308161 DOCK2Q92608 1830 aa20.83■□□□□ 0.93
HMGCLL1-202ENST00000308161 SLURP2P0DP57 97 aa20.83■□□□□ 0.93
HMGCLL1-202ENST00000308161 PPIL2Q13356 520 aa20.83■□□□□ 0.93
HMGCLL1-202ENST00000308161 NOM1Q5C9Z4 860 aaKnown RBP20.83■□□□□ 0.93
HMGCLL1-202ENST00000308161 TEX11Q8IYF3 940 aa20.83■□□□□ 0.93
HMGCLL1-202ENST00000308161 RHPN1Q8TCX5 695 aa20.83■□□□□ 0.93
HMGCLL1-202ENST00000308161 PIH1D3Q9NQM4 214 aaKnown RBP20.83■□□□□ 0.93
HMGCLL1-202ENST00000308161 AATFQ9NY61 560 aaKnown RBP eCLIP20.83■□□□□ 0.93
HMGCLL1-202ENST00000308161 LAMB1P07942 1786 aa20.83■□□□□ 0.92
HMGCLL1-202ENST00000308161 CETPP11597 493 aa20.82■□□□□ 0.92
HMGCLL1-202ENST00000308161 SNAPC2Q13487 334 aa20.82■□□□□ 0.92
HMGCLL1-202ENST00000308161 TAF1CQ15572 869 aaPredicted RBP20.82■□□□□ 0.92
HMGCLL1-202ENST00000308161 SIRT2Q8IXJ6 389 aa20.82■□□□□ 0.92
HMGCLL1-202ENST00000308161 ZNF512BQ96KM6 892 aaPredicted RBP20.82■□□□□ 0.92
HMGCLL1-202ENST00000308161 ZNF112Q9UJU3 913 aa20.82■□□□□ 0.92
HMGCLL1-202ENST00000308161 IDH1O75874 414 aaKnown RBP20.81■□□□□ 0.92
HMGCLL1-202ENST00000308161 PPATQ06203 517 aa20.81■□□□□ 0.92
HMGCLL1-202ENST00000308161 PDE3AQ14432 1141 aa20.81■□□□□ 0.92
HMGCLL1-202ENST00000308161 FAM43AQ8N2R8 423 aa20.81■□□□□ 0.92
HMGCLL1-202ENST00000308161 SH3RF3Q8TEJ3 882 aaPredicted RBP20.81■□□□□ 0.92
HMGCLL1-202ENST00000308161 YTHDC1Q96MU7 727 aaKnown RBP20.81■□□□□ 0.92
HMGCLL1-202ENST00000308161 ATRNL1Q5VV63 1379 aa20.81■□□□□ 0.92
HMGCLL1-202ENST00000308161 MAST2Q6P0Q8 1798 aa20.81■□□□□ 0.92
HMGCLL1-202ENST00000308161 FAM196BA6NMK8 535 aa20.8■□□□□ 0.92
HMGCLL1-202ENST00000308161 BAG3O95817 575 aa20.8■□□□□ 0.92
HMGCLL1-202ENST00000308161 CLASRPQ8N2M8 674 aaKnown RBP20.8■□□□□ 0.92
HMGCLL1-202ENST00000308161 KIF1BPQ96EK5 621 aa20.8■□□□□ 0.92
HMGCLL1-202ENST00000308161 ADGRA1Q86SQ6 560 aa20.79■□□□□ 0.92
HMGCLL1-202ENST00000308161 ZFYVE28Q9HCC9 887 aa20.79■□□□□ 0.92
HMGCLL1-202ENST00000308161 PICK1Q9NRD5 415 aa20.79■□□□□ 0.92
HMGCLL1-202ENST00000308161 BTBD19C9JJ37 291 aa20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 MAP4K4O95819 1239 aaPredicted RBP20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 IFIT2P09913 472 aaKnown RBP20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 CYP7A1P22680 504 aa20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 NOL9Q5SY16 702 aaKnown RBP20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 SCYL3Q8IZE3 742 aa20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 CD99L2Q8TCZ2 262 aa20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 OSBPL5Q9H0X9 879 aaPredicted RBP20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 ANTXR1Q9H6X2 564 aa20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 HPS5Q9UPZ3 1129 aa20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 TRIM17Q9Y577 477 aa20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 PHF20L1A8MW92 1017 aa20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 PKN2Q16513 984 aaKnown RBP20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 MAPKAPK5Q8IW41 473 aa20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 ERO1AQ96HE7 468 aa20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 MYO5AQ9Y4I1 1855 aaKnown RBP20.78■□□□□ 0.92
HMGCLL1-202ENST00000308161 PLCG2P16885 1265 aa20.77■□□□□ 0.91
HMGCLL1-202ENST00000308161 DYNLL1P63167 89 aaKnown RBP20.77■□□□□ 0.91
HMGCLL1-202ENST00000308161 SP3Q02447 781 aa20.77■□□□□ 0.91
HMGCLL1-202ENST00000308161 MAGEB6Q8N7X4 407 aa20.77■□□□□ 0.91
HMGCLL1-202ENST00000308161 MIGA1Q8NAN2 632 aa20.77■□□□□ 0.91
HMGCLL1-202ENST00000308161 TGFBRAP1Q8WUH2 860 aa20.77■□□□□ 0.91
HMGCLL1-202ENST00000308161 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.77■□□□□ 0.91
HMGCLL1-202ENST00000308161 ZHX2Q9Y6X8 837 aa20.77■□□□□ 0.91
HMGCLL1-202ENST00000308161 RAB11FIP3O75154 756 aa20.76■□□□□ 0.91
HMGCLL1-202ENST00000308161 NPM3O75607 178 aaKnown RBP20.76■□□□□ 0.91
HMGCLL1-202ENST00000308161 SOX10P56693 466 aa20.76■□□□□ 0.91
HMGCLL1-202ENST00000308161 FBXO46Q6PJ61 603 aaPredicted RBP20.76■□□□□ 0.91
HMGCLL1-202ENST00000308161 DNAJC2Q99543 621 aaKnown RBP20.76■□□□□ 0.91
HMGCLL1-202ENST00000308161 ECM2O94769 699 aaPredicted RBP20.75■□□□□ 0.91
HMGCLL1-202ENST00000308161 PPP4CP60510 307 aa20.75■□□□□ 0.91
HMGCLL1-202ENST00000308161 MAP3K12Q12852 859 aa20.75■□□□□ 0.91
HMGCLL1-202ENST00000308161 SLC4A8Q2Y0W8 1093 aa20.75■□□□□ 0.91
HMGCLL1-202ENST00000308161 OTOP1Q7RTM1 612 aa20.75■□□□□ 0.91
HMGCLL1-202ENST00000308161 CCDC84Q86UT8 332 aaPredicted RBP20.75■□□□□ 0.91
HMGCLL1-202ENST00000308161 KCNH4Q9UQ05 1017 aa20.75■□□□□ 0.91
HMGCLL1-202ENST00000308161 CTNND1O60716 968 aaKnown RBP20.74■□□□□ 0.91
HMGCLL1-202ENST00000308161 PTPRAP18433 802 aa20.74■□□□□ 0.91
HMGCLL1-202ENST00000308161 MAP3K10Q02779 954 aa20.74■□□□□ 0.91
HMGCLL1-202ENST00000308161 SAP30BPQ9UHR5 308 aaKnown RBP20.74■□□□□ 0.91
HMGCLL1-202ENST00000308161 FLT1P17948 1338 aa20.73■□□□□ 0.91
HMGCLL1-202ENST00000308161 COL2A1P02458 1487 aaPredicted RBP20.73■□□□□ 0.91
HMGCLL1-202ENST00000308161 PDHXO00330 501 aa20.73■□□□□ 0.91
HMGCLL1-202ENST00000308161 EFCC1Q9HA90 598 aa20.73■□□□□ 0.91
HMGCLL1-202ENST00000308161 TRIM75PA6NK02 468 aa20.72■□□□□ 0.91
HMGCLL1-202ENST00000308161 GOLIM4O00461 696 aa20.72■□□□□ 0.91
HMGCLL1-202ENST00000308161 CXCL11O14625 94 aa20.72■□□□□ 0.91
HMGCLL1-202ENST00000308161 TBC1D12O60347 775 aa20.72■□□□□ 0.91
HMGCLL1-202ENST00000308161 GADL1Q6ZQY3 521 aa20.72■□□□□ 0.91
HMGCLL1-202ENST00000308161 ANKRD23Q86SG2 305 aa20.72■□□□□ 0.91
HMGCLL1-202ENST00000308161 TRIM34Q9BYJ4 488 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms