RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 MYSM1Q5VVJ2 828 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 CYB5R4Q7L1T6 521 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 RIC3Q7Z5B4 369 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 PROSER2Q86WR7 435 aaPredicted RBP6.32□□□□□ -1.4
VPS50-202ENST00000305866 IGDCC4Q8TDY8 1250 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 TNFRSF25Q93038 417 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 PNKPQ96T60 521 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 PAG1Q9NWQ8 432 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 REXO2Q9Y3B8 237 aaKnown RBP6.32□□□□□ -1.4
VPS50-202ENST00000305866 UBN2Q6ZU65 1347 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 GSDMDP57764 484 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 SYT10Q6XYQ8 523 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 SGMS1Q86VZ5 419 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 LTV1Q96GA3 475 aaPredicted RBP6.32□□□□□ -1.4
VPS50-202ENST00000305866 ZCCHC17Q9NP64 241 aaKnown RBP6.32□□□□□ -1.4
VPS50-202ENST00000305866 CFAP45Q9UL16 551 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 A0A1B0GTH6 734 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 BHMG1C9JSJ3 638 aaPredicted RBP6.31□□□□□ -1.4
VPS50-202ENST00000305866 ZNF202O95125 648 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 TFRCP02786 760 aaKnown RBP6.31□□□□□ -1.4
VPS50-202ENST00000305866 TUBB4AP04350 444 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 FUT2Q10981 343 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 UBE3CQ15386 1083 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 MRPS27Q92552 414 aaKnown RBP6.31□□□□□ -1.4
VPS50-202ENST00000305866 IFNKQ9P0W0 207 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 DNAI1Q9UI46 699 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 FBXO2Q9UK22 296 aaPredicted RBP6.31□□□□□ -1.4
VPS50-202ENST00000305866 NAV1Q8NEY1 1877 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 FANCCQ00597 558 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 TPD52L1Q16890 204 aaPredicted RBP6.31□□□□□ -1.4
VPS50-202ENST00000305866 CT47A1Q5JQC4 288 aaPredicted RBP6.31□□□□□ -1.4
VPS50-202ENST00000305866 FOXR1Q6PIV2 292 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 ZCRB1Q8TBF4 217 aaKnown RBP6.31□□□□□ -1.4
VPS50-202ENST00000305866 AIFM3Q96NN9 605 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 ANO10Q9NW15 660 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 L1RE1Q9UN81 338 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 AKAP2Q9Y2D5 859 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 RGPD3A6NKT7 1758 aaPredicted RBP6.31□□□□□ -1.4
VPS50-202ENST00000305866 RGPD4Q7Z3J3 1758 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 ADAMTS3O15072 1205 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 PRR29P0C7W0 189 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 CD44P16070 742 aaKnown RBP6.31□□□□□ -1.4
VPS50-202ENST00000305866 LONRF3Q496Y0 759 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 OTUD7BQ6GQQ9 843 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 RAD9BQ6WBX8 426 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 BRAPQ7Z569 592 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 TBC1D10CQ8IV04 446 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 ZNF34Q8IZ26 560 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 CCDC150Q8NCX0 1101 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 MTRQ99707 1265 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 FSD1Q9BTV5 496 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 TRMT1Q9NXH9 659 aaKnown RBP6.31□□□□□ -1.4
VPS50-202ENST00000305866 CHMP3Q9Y3E7 222 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 PNPLA7Q6ZV29 1317 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 SIPA1L1O43166 1804 aa6.31□□□□□ -1.4
VPS50-202ENST00000305866 SOX12O15370 315 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 SHOX2O60902 331 aaPredicted RBP6.3□□□□□ -1.4
VPS50-202ENST00000305866 PTPN21Q16825 1174 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 LRRFIP1Q32MZ4 808 aaKnown RBP6.3□□□□□ -1.4
VPS50-202ENST00000305866 LRRC24Q50LG9 513 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 NOL10Q9BSC4 688 aaKnown RBP6.3□□□□□ -1.4
VPS50-202ENST00000305866 ANAPC4Q9UJX5 808 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 LRRC10BA6NIK2 292 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 SYF2O95926 243 aaKnown RBP6.3□□□□□ -1.4
VPS50-202ENST00000305866 CPP00450 1065 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 MTF1Q14872 753 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 FSIP1Q8NA03 581 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 LRRC15Q8TF66 581 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 APPBP2Q92624 585 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 XAGE2Q96GT9 111 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 PUS7LQ9H0K6 701 aaKnown RBP6.3□□□□□ -1.4
VPS50-202ENST00000305866 PPP2R2CQ9Y2T4 447 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 MYH4Q9Y623 1939 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 A0A087WZG4 1122 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 AGPSO00116 658 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 IL2RBP14784 551 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 AARSP49588 968 aaKnown RBP eCLIP6.3□□□□□ -1.4
VPS50-202ENST00000305866 SLC39A6Q13433 755 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 GIGYF2Q6Y7W6 1299 aaKnown RBP6.3□□□□□ -1.4
VPS50-202ENST00000305866 ZNF804BA4D1E1 1349 aa6.3□□□□□ -1.4
VPS50-202ENST00000305866 KIF2AO00139 706 aaPredicted RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 ATF3P18847 181 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 ADD2P35612 726 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 CABP4P57796 275 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 LMBR1LQ6UX01 489 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 DDX46Q7L014 1031 aaKnown RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 ZNF572Q7Z3I7 529 aaPredicted RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 PARD6BQ9BYG5 372 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 LY9Q9HBG7 655 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 IRS2Q9Y4H2 1338 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 FGAP02671 866 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 ZBTB48P10074 688 aaPredicted RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 LIFRP42702 1097 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 BMS1Q14692 1282 aaKnown RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 E2F4Q16254 413 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 DNTTIP2Q5QJE6 756 aaKnown RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 ANO1Q5XXA6 986 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 RASGRP2Q7LDG7 609 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 PURBQ96QR8 312 aaKnown RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 PUS3Q9BZE2 481 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms