RNA–Protein interactions for RNA: ENST00000301071.11

TUBA1A-202, Transcript of tubulin alpha 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1A, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-202ENST00000301071 NECTIN1Q15223 517 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 TTC31Q49AM3 519 aaPredicted RBP10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 GRIPAP1Q4V328 841 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 SLC10A5Q5PT55 438 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 PRPF40BQ6NWY9 871 aaKnown RBP10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 CC2D1AQ6P1N0 951 aaPredicted RBP10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 BLOC1S2Q6QNY1 142 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 C11orf57Q6ZUT1 292 aaPredicted RBP10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 FERMT3Q86UX7 667 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 DHX40Q8IX18 779 aaKnown RBP10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 C10orf67Q8IYJ2 551 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 SLC16A10Q8TF71 515 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 PGBD1Q96JS3 809 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 ZNF396Q96N95 335 aaPredicted RBP10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 CBFA2T2O43439 604 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 EIF3JO75822 258 aaKnown RBP10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 CSF1RP07333 972 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 MMP14P50281 582 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 CTSWP56202 376 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 ST3GAL1Q11201 340 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 RESTQ13127 1097 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 KRT32Q14532 448 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 ARID5BQ14865 1188 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 BRD3Q15059 726 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 CNBD1Q8NA66 436 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 RABGGTAQ92696 567 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 EVI5LQ96CN4 794 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 FAM107BQ9H098 131 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 TPCN1Q9ULQ1 816 aa10.54□□□□□ -0.72
TUBA1A-202ENST00000301071 H3BQV1 296 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 SURF6O75683 361 aaKnown RBP10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 TBC1D8O95759 1140 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 GUCY2CP25092 1073 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 FAM160A1Q05DH4 1040 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 IFFO2Q5TF58 517 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 CREB3L3Q68CJ9 461 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 C3orf67Q6ZVT6 689 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 TTLL11Q8NHH1 800 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 PPM1EQ8WY54 764 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 CCDC85AQ96PX6 553 aaPredicted RBP10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 NCAPGQ9BPX3 1015 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 DEF6Q9H4E7 631 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 SNRKQ9NRH2 765 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 TFIP11Q9UBB9 837 aaKnown RBP10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 RCOR1Q9UKL0 485 aa10.53□□□□□ -0.72
TUBA1A-202ENST00000301071 RFX5P48382 616 aaPredicted RBP10.52□□□□□ -0.72
TUBA1A-202ENST00000301071 EVCP57679 992 aa10.52□□□□□ -0.72
TUBA1A-202ENST00000301071 ERC1Q8IUD2 1116 aa10.52□□□□□ -0.72
TUBA1A-202ENST00000301071 CCAR1Q8IX12 1150 aaKnown RBP10.52□□□□□ -0.72
TUBA1A-202ENST00000301071 NECAB1Q8N987 351 aa10.52□□□□□ -0.72
TUBA1A-202ENST00000301071 DDX11Q96FC9 970 aa10.52□□□□□ -0.72
TUBA1A-202ENST00000301071 LARP6Q9BRS8 491 aaKnown RBP10.52□□□□□ -0.72
TUBA1A-202ENST00000301071 LLPHQ9BRT6 129 aaKnown RBP10.52□□□□□ -0.72
TUBA1A-202ENST00000301071 ACBD3Q9H3P7 528 aa10.52□□□□□ -0.72
TUBA1A-202ENST00000301071 IL1RAPL2Q9NP60 686 aa10.52□□□□□ -0.72
TUBA1A-202ENST00000301071 PARP3Q9Y6F1 533 aa10.52□□□□□ -0.72
TUBA1A-202ENST00000301071 COL4A1P02462 1669 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 RIC1Q4ADV7 1423 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 CCDC151A5D8V7 595 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 ZBTB7AO95365 584 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 TUBBP07437 444 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 RPS6KB1P23443 525 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 ST5P78524 1137 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 TUBB2AQ13885 445 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 ADCK5Q3MIX3 580 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 TSGA10IPQ3SY00 556 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 NAA16Q6N069 864 aaPredicted RBP10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 TMC6Q7Z403 805 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 AOPEPQ8N6M6 819 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 GOLGA1Q92805 767 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 MAP4K1Q92918 833 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 TUBB2BQ9BVA1 445 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 GREM2Q9H772 168 aa10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 PA2G4Q9UQ80 394 aaKnown RBP10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 RBM8AQ9Y5S9 174 aaKnown RBP10.52□□□□□ -0.73
TUBA1A-202ENST00000301071 CLGNO14967 610 aa10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 ERLIN1O75477 346 aa10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 URI1O94763 535 aaPredicted RBP10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 CPA1P15085 419 aa10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 LMAN1P49257 510 aa10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 MAPK8IP2Q13387 824 aaPredicted RBP10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 SF3B3Q15393 1217 aaKnown RBP10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 NBPF11Q86T75 865 aa10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 KLHDC4Q8TBB5 520 aa10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 HNRNPLLQ8WVV9 542 aaKnown RBP10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 ADAM21Q9UKJ8 722 aa10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 COL11A2P13942 1736 aaPredicted RBP10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 CACNA1SQ13698 1873 aa10.51□□□□□ -0.73
TUBA1A-202ENST00000301071 PTH1RQ03431 593 aa10.5□□□□□ -0.73
TUBA1A-202ENST00000301071 PTPN12Q05209 780 aaKnown RBP10.5□□□□□ -0.73
TUBA1A-202ENST00000301071 CLASRPQ8N2M8 674 aaKnown RBP10.5□□□□□ -0.73
TUBA1A-202ENST00000301071 NLRP3Q96P20 1036 aa10.5□□□□□ -0.73
TUBA1A-202ENST00000301071 PLCD4Q9BRC7 762 aa10.5□□□□□ -0.73
TUBA1A-202ENST00000301071 MTFR1LQ9H019 292 aa10.5□□□□□ -0.73
TUBA1A-202ENST00000301071 GBP3Q9H0R5 595 aa10.5□□□□□ -0.73
TUBA1A-202ENST00000301071 ECHDC1Q9NTX5 307 aa10.5□□□□□ -0.73
TUBA1A-202ENST00000301071 ATF5Q9Y2D1 282 aaPredicted RBP10.5□□□□□ -0.73
TUBA1A-202ENST00000301071 JRKLQ9Y4A0 524 aa10.5□□□□□ -0.73
TUBA1A-202ENST00000301071 SLC27A2O14975 620 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms