RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 OAS2P29728 719 aaKnown RBP12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 MAGI1Q96QZ7 1491 aaPredicted RBP12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 MAPKBP1O60336 1514 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 ACTN4O43707 911 aaKnown RBP12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 IRX5P78411 483 aaPredicted RBP12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 SYT10Q6XYQ8 523 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 KDM5AP29375 1690 aaKnown RBP12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 EVCP57679 992 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 GOLGA5Q8TBA6 731 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 C8orf34Q49A92 452 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 CATIPQ7Z7H3 387 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 LGSNQ5TDP6 509 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 H0YC42 278 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 C8orf74Q6P047 294 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 KRT75O95678 551 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 FLOT2Q14254 428 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 ATG3Q9NT62 314 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 PPME1Q9Y570 386 aa12.43□□□□□ -0.42
HDGFL3-201ENST00000299633 OPTNQ96CV9 577 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 AFG3L2Q9Y4W6 797 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 KDM1AO60341 852 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 EEF1B2P24534 225 aaKnown RBP12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 MRPL28Q13084 256 aaKnown RBP12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 IRAK4Q9NWZ3 460 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 BTN2A1Q7KYR7 527 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 DDX42Q86XP3 938 aaKnown RBP eCLIP12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 DNAJC25Q9H1X3 360 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 DISP3Q9P2K9 1392 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 TYRO3Q06418 890 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 FAM71BQ8TC56 605 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 NLRP7Q8WX94 980 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 GUCA1BQ9UMX6 200 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 IDH1O75874 414 aaKnown RBP12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 CTAGE3PQ8IX95 158 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 AGTPBP1Q9UPW5 1226 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 EVI5O60447 810 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 KIFC3Q9BVG8 833 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 PYGLP06737 847 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 KIAA2013Q8IYS2 634 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 AOPEPQ8N6M6 819 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 AIDAQ96BJ3 306 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 ALDH1L2Q3SY69 923 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 SLC12A7Q9Y666 1083 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 BCL2L12Q9HB09 334 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 KLHL14Q9P2G3 628 aa12.42□□□□□ -0.42
HDGFL3-201ENST00000299633 CCDC194A0A1B0GVG4 234 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 DEUP1Q05D60 604 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 UBL4BQ8N7F7 174 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 TSC22D4Q9Y3Q8 395 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 CCDC138Q96M89 665 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 NBNO60934 754 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 BASP1P80723 227 aaKnown RBP12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 IFT140Q96RY7 1462 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 MRPS15P82914 257 aaKnown RBP12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 RSBN1LQ6PCB5 846 aaPredicted RBP12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 CEP70Q8NHQ1 597 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 STAT6P42226 847 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 POLE2P56282 527 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 SH3GL3Q99963 347 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 LRP2BPQ9P2M1 347 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 SPG7Q9UQ90 795 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 MAP3K7O43318 606 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 BOLA2Q9H3K6 86 aa12.41□□□□□ -0.42
HDGFL3-201ENST00000299633 CCT2P78371 535 aaKnown RBP12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 BIRC2Q13490 618 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 PLCB4Q15147 1175 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 FAM204AQ9H8W3 233 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 SPC25Q9HBM1 224 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 SUFUQ9UMX1 484 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 FBXO41Q8TF61 875 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 ABCC11Q96J66 1382 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 TTC4O95801 387 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 SF3A3Q12874 501 aaKnown RBP eCLIP12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 POLR3CQ9BUI4 534 aaPredicted RBP12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 SAMM50Q9Y512 469 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 MGARPQ8TDB4 240 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 MYH7BA7E2Y1 1941 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 ARHGAP4P98171 946 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 GABPAQ06546 454 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 RAB3GAP1Q15042 981 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 ZSCAN29Q8IWY8 852 aaPredicted RBP12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 SH3GL2Q99962 352 aa12.4□□□□□ -0.42
HDGFL3-201ENST00000299633 PDXDC1Q6P996 788 aa12.4□□□□□ -0.43
HDGFL3-201ENST00000299633 SEC24BO95487 1268 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 UBXN1Q04323 297 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 CCDC15Q0P6D6 951 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 TMEM232C9JQI7 657 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 F6X3S4 739 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 MMEL1Q495T6 779 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 TOM1L2Q6ZVM7 507 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 DHX29Q7Z478 1369 aaKnown RBP12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 UBA7P41226 1012 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 SPAG1Q07617 926 aa12.39□□□□□ -0.43
HDGFL3-201ENST00000299633 CFAP61Q8NHU2 1237 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms