RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SUCLG2Q96I99 432 aa25.78■■□□□ 1.72
SMCO4-201ENST00000298966 DCTPP1Q9H773 170 aa25.78■■□□□ 1.72
SMCO4-201ENST00000298966 NR2E3Q9Y5X4 410 aa25.78■■□□□ 1.72
SMCO4-201ENST00000298966 AK9Q5TCS8 1911 aa25.78■■□□□ 1.72
SMCO4-201ENST00000298966 INPP5BP32019 993 aa25.77■■□□□ 1.72
SMCO4-201ENST00000298966 METTL24Q5JXM2 366 aa25.77■■□□□ 1.72
SMCO4-201ENST00000298966 MIGA2Q7L4E1 593 aa25.77■■□□□ 1.72
SMCO4-201ENST00000298966 RNF208Q9H0X6 261 aa25.77■■□□□ 1.72
SMCO4-201ENST00000298966 SUGT1Q9Y2Z0 365 aa25.77■■□□□ 1.72
SMCO4-201ENST00000298966 SZT2Q5T011 3432 aa25.77■■□□□ 1.72
SMCO4-201ENST00000298966 UBE2Q1Q7Z7E8 422 aa25.76■■□□□ 1.71
SMCO4-201ENST00000298966 KCNH4Q9UQ05 1017 aa25.76■■□□□ 1.71
SMCO4-201ENST00000298966 ADGRA2Q96PE1 1338 aa25.76■■□□□ 1.71
SMCO4-201ENST00000298966 HHIPL2Q6UWX4 724 aa25.75■■□□□ 1.71
SMCO4-201ENST00000298966 SSH3Q8TE77 659 aa25.74■■□□□ 1.71
SMCO4-201ENST00000298966 FAM151AQ8WW52 585 aa25.74■■□□□ 1.71
SMCO4-201ENST00000298966 KAZALD1Q96I82 304 aa25.74■■□□□ 1.71
SMCO4-201ENST00000298966 PARK7Q99497 189 aaKnown RBP25.74■■□□□ 1.71
SMCO4-201ENST00000298966 MGAMO43451 1857 aa25.73■■□□□ 1.71
SMCO4-201ENST00000298966 PDE8BO95263 885 aa25.73■■□□□ 1.71
SMCO4-201ENST00000298966 BCAMP50895 628 aa25.73■■□□□ 1.71
SMCO4-201ENST00000298966 FCGRTP55899 365 aa25.73■■□□□ 1.71
SMCO4-201ENST00000298966 LRRC24Q50LG9 513 aa25.73■■□□□ 1.71
SMCO4-201ENST00000298966 PRO3102Q9H379 93 aa25.73■■□□□ 1.71
SMCO4-201ENST00000298966 RANBP2P49792 3224 aaKnown RBP25.73■■□□□ 1.71
SMCO4-201ENST00000298966 FARP2O94887 1054 aaPredicted RBP25.72■■□□□ 1.71
SMCO4-201ENST00000298966 SLAIN1Q8ND83 568 aa25.72■■□□□ 1.71
SMCO4-201ENST00000298966 ZBTB47Q9UFB7 747 aaPredicted RBP25.72■■□□□ 1.71
SMCO4-201ENST00000298966 ZNF112Q9UJU3 913 aa25.72■■□□□ 1.71
SMCO4-201ENST00000298966 MYH13Q9UKX3 1938 aa25.71■■□□□ 1.71
SMCO4-201ENST00000298966 NUCB1Q02818 461 aa25.71■■□□□ 1.71
SMCO4-201ENST00000298966 PRKCZQ05513 592 aa25.71■■□□□ 1.71
SMCO4-201ENST00000298966 POLA2Q14181 598 aa25.71■■□□□ 1.71
SMCO4-201ENST00000298966 HSP90AB4PQ58FF6 505 aa25.71■■□□□ 1.71
SMCO4-201ENST00000298966 SLC17A8Q8NDX2 589 aa25.71■■□□□ 1.71
SMCO4-201ENST00000298966 U2AF1L4Q8WU68 220 aaKnown RBP25.71■■□□□ 1.71
SMCO4-201ENST00000298966 BICC1Q9H694 974 aaKnown RBP25.71■■□□□ 1.71
SMCO4-201ENST00000298966 IFIT1P09914 478 aaKnown RBP25.7■■□□□ 1.7
SMCO4-201ENST00000298966 MOGSQ13724 837 aa25.7■■□□□ 1.7
SMCO4-201ENST00000298966 NOL9Q5SY16 702 aaKnown RBP25.7■■□□□ 1.7
SMCO4-201ENST00000298966 VGLL2Q8N8G2 317 aa25.7■■□□□ 1.7
SMCO4-201ENST00000298966 DLL1O00548 723 aa25.69■■□□□ 1.7
SMCO4-201ENST00000298966 BCRP11274 1271 aa25.69■■□□□ 1.7
SMCO4-201ENST00000298966 TCP10Q12799 353 aa25.69■■□□□ 1.7
SMCO4-201ENST00000298966 RABL6Q3YEC7 729 aaPredicted RBP25.69■■□□□ 1.7
SMCO4-201ENST00000298966 A0A1W2PPC1 479 aa25.68■■□□□ 1.7
SMCO4-201ENST00000298966 CXCL11O14625 94 aa25.68■■□□□ 1.7
SMCO4-201ENST00000298966 SRGAP3O43295 1099 aa25.68■■□□□ 1.7
SMCO4-201ENST00000298966 WDR66Q8TBY9 1149 aa25.68■■□□□ 1.7
SMCO4-201ENST00000298966 UNC93B1Q9H1C4 597 aa25.68■■□□□ 1.7
SMCO4-201ENST00000298966 RAB11FIP3O75154 756 aa25.67■■□□□ 1.7
SMCO4-201ENST00000298966 SGPL1O95470 568 aa25.67■■□□□ 1.7
SMCO4-201ENST00000298966 CYP2C8P10632 490 aa25.67■■□□□ 1.7
SMCO4-201ENST00000298966 CHD1LQ86WJ1 897 aa25.67■■□□□ 1.7
SMCO4-201ENST00000298966 GABRQQ9UN88 632 aa25.67■■□□□ 1.7
SMCO4-201ENST00000298966 PNMA6EA0A0J9YXQ4 647 aa25.66■■□□□ 1.7
SMCO4-201ENST00000298966 ADCY3O60266 1144 aa25.66■■□□□ 1.7
SMCO4-201ENST00000298966 EVI5O60447 810 aa25.66■■□□□ 1.7
SMCO4-201ENST00000298966 CAPN2P17655 700 aa25.66■■□□□ 1.7
SMCO4-201ENST00000298966 PUM3Q15397 648 aaKnown RBP25.66■■□□□ 1.7
SMCO4-201ENST00000298966 GPAT2Q6NUI2 795 aa25.66■■□□□ 1.7
SMCO4-201ENST00000298966 DAGLAQ9Y4D2 1042 aa25.66■■□□□ 1.7
SMCO4-201ENST00000298966 CDC42EP5Q6NZY7 148 aa25.65■■□□□ 1.7
SMCO4-201ENST00000298966 FASTKD5Q7L8L6 764 aaKnown RBP25.64■■□□□ 1.7
SMCO4-201ENST00000298966 NOP58Q9Y2X3 529 aaKnown RBP25.64■■□□□ 1.7
SMCO4-201ENST00000298966 TFRCP02786 760 aaKnown RBP25.63■■□□□ 1.69
SMCO4-201ENST00000298966 SLC5A1P13866 664 aa25.63■■□□□ 1.69
SMCO4-201ENST00000298966 FGFR2P21802 821 aa25.63■■□□□ 1.69
SMCO4-201ENST00000298966 NFIAQ12857 509 aa25.63■■□□□ 1.69
SMCO4-201ENST00000298966 ANKRD45Q5TZF3 282 aa25.63■■□□□ 1.69
SMCO4-201ENST00000298966 KLHDC4Q8TBB5 520 aa25.63■■□□□ 1.69
SMCO4-201ENST00000298966 TSHZ2Q9NRE2 1034 aa25.63■■□□□ 1.69
SMCO4-201ENST00000298966 INHAP05111 366 aa25.62■■□□□ 1.69
SMCO4-201ENST00000298966 FLT3LGP49771 235 aa25.62■■□□□ 1.69
SMCO4-201ENST00000298966 DIXDC1Q155Q3 683 aa25.62■■□□□ 1.69
SMCO4-201ENST00000298966 ERC1Q8IUD2 1116 aa25.62■■□□□ 1.69
SMCO4-201ENST00000298966 PXYLP1Q8TE99 480 aa25.62■■□□□ 1.69
SMCO4-201ENST00000298966 PICK1Q9NRD5 415 aa25.62■■□□□ 1.69
SMCO4-201ENST00000298966 USP40Q9NVE5 1235 aa25.62■■□□□ 1.69
SMCO4-201ENST00000298966 TNPO2O14787 897 aaKnown RBP25.61■■□□□ 1.69
SMCO4-201ENST00000298966 ELNP15502 786 aa25.61■■□□□ 1.69
SMCO4-201ENST00000298966 GADL1Q6ZQY3 521 aa25.61■■□□□ 1.69
SMCO4-201ENST00000298966 DEFB118Q96PH6 123 aa25.61■■□□□ 1.69
SMCO4-201ENST00000298966 FAM198AQ9UFP1 575 aa25.61■■□□□ 1.69
SMCO4-201ENST00000298966 ZHX2Q9Y6X8 837 aa25.61■■□□□ 1.69
SMCO4-201ENST00000298966 CUL9Q8IWT3 2517 aa25.61■■□□□ 1.69
SMCO4-201ENST00000298966 DOCK2Q92608 1830 aa25.6■■□□□ 1.69
SMCO4-201ENST00000298966 A0A0G2JLL6 359 aaPredicted RBP25.6■■□□□ 1.69
SMCO4-201ENST00000298966 IRF5Q13568 498 aa25.6■■□□□ 1.69
SMCO4-201ENST00000298966 PRRT2Q7Z6L0 340 aaPredicted RBP25.6■■□□□ 1.69
SMCO4-201ENST00000298966 SKAP1Q86WV1 359 aa25.6■■□□□ 1.69
SMCO4-201ENST00000298966 SCYL3Q8IZE3 742 aa25.6■■□□□ 1.69
SMCO4-201ENST00000298966 SURF6O75683 361 aaKnown RBP25.59■■□□□ 1.69
SMCO4-201ENST00000298966 LPIN2Q92539 896 aa25.59■■□□□ 1.69
SMCO4-201ENST00000298966 LRRCC1Q9C099 1032 aa25.59■■□□□ 1.69
SMCO4-201ENST00000298966 STAP2Q9UGK3 403 aa25.59■■□□□ 1.69
SMCO4-201ENST00000298966 SLC45A1Q9Y2W3 748 aa25.59■■□□□ 1.69
SMCO4-201ENST00000298966 SOX1O00570 391 aaPredicted RBP25.58■■□□□ 1.69
SMCO4-201ENST00000298966 LDHBP07195 334 aaKnown RBP25.58■■□□□ 1.69
SMCO4-201ENST00000298966 PRDX5P30044 214 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms