RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 ANKRD20A12PQ8NF67 263 aa12.99□□□□□ -0.33
TRUB1-201ENST00000298746 ZNF496Q96IT1 587 aaPredicted RBP12.99□□□□□ -0.33
TRUB1-201ENST00000298746 CCDC57Q2TAC2 916 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 ACRBPQ8NEB7 543 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 TMEM2Q9UHN6 1383 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 CACNA1FO60840 1977 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 B4E1Z4 1266 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 EIF3CLB5ME19 914 aaKnown RBP12.98□□□□□ -0.33
TRUB1-201ENST00000298746 TEX33O43247 280 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 RBL2Q08999 1139 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 E2F4Q16254 413 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 TMEM67Q5HYA8 995 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 RSRC2Q7L4I2 434 aaKnown RBP12.98□□□□□ -0.33
TRUB1-201ENST00000298746 TRIM22Q8IYM9 498 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 RASSF8Q8NHQ8 419 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 STAMQ92783 540 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 PNKPQ96T60 521 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 EIF3CQ99613 913 aaKnown RBP12.98□□□□□ -0.33
TRUB1-201ENST00000298746 MAN1B1Q9UKM7 699 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 KCNJ14Q9UNX9 436 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 FMR1Q06787 632 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRUB1-201ENST00000298746 SSRP1Q08945 709 aaKnown RBP12.98□□□□□ -0.33
TRUB1-201ENST00000298746 MLKLQ8NB16 471 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 NAPGQ99747 312 aaPredicted RBP12.98□□□□□ -0.33
TRUB1-201ENST00000298746 SLF1Q9BQI6 1058 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 TUBE1Q9UJT0 475 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 JRKLQ9Y4A0 524 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 SLC12A7Q9Y666 1083 aa12.98□□□□□ -0.33
TRUB1-201ENST00000298746 H0YHG0 523 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 IFIT3O14879 490 aaKnown RBP12.97□□□□□ -0.33
TRUB1-201ENST00000298746 ZMYND10O75800 440 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 IL15P40933 162 aaPredicted RBP12.97□□□□□ -0.33
TRUB1-201ENST00000298746 VSNL1P62760 191 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 ANGEL1Q9UNK9 670 aaKnown RBP12.97□□□□□ -0.33
TRUB1-201ENST00000298746 C3P01024 1663 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 A0A0U1RQJ8 604 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 BTBD18B2RXH4 712 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 IPO7O95373 1038 aaKnown RBP12.97□□□□□ -0.33
TRUB1-201ENST00000298746 CASP14P31944 242 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 PIP4K2BP78356 416 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 DNAJC21Q5F1R6 531 aaKnown RBP12.97□□□□□ -0.33
TRUB1-201ENST00000298746 FOXP4Q8IVH2 680 aaPredicted RBP12.97□□□□□ -0.33
TRUB1-201ENST00000298746 KCNH5Q8NCM2 988 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 ATRIPQ8WXE1 791 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 PCMTD1Q96MG8 357 aaPredicted RBP12.97□□□□□ -0.33
TRUB1-201ENST00000298746 VPS16Q9H269 839 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 GPAA1O43292 621 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 ICE2Q659A1 982 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 NCAPH2Q6IBW4 605 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 PAXIP1Q6ZW49 1069 aaPredicted RBP12.97□□□□□ -0.33
TRUB1-201ENST00000298746 SMYD4Q8IYR2 804 aaPredicted RBP12.97□□□□□ -0.33
TRUB1-201ENST00000298746 AFAP1L1Q8TED9 768 aa12.97□□□□□ -0.33
TRUB1-201ENST00000298746 TUBGCP6Q96RT7 1819 aa12.96□□□□□ -0.33
TRUB1-201ENST00000298746 SALL1Q9NSC2 1324 aa12.96□□□□□ -0.33
TRUB1-201ENST00000298746 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
TRUB1-201ENST00000298746 KCNA6P17658 529 aa12.96□□□□□ -0.33
TRUB1-201ENST00000298746 PI16Q6UXB8 463 aa12.96□□□□□ -0.33
TRUB1-201ENST00000298746 PPM1EQ8WY54 764 aa12.96□□□□□ -0.33
TRUB1-201ENST00000298746 HSD3B7Q9H2F3 369 aa12.96□□□□□ -0.33
TRUB1-201ENST00000298746 INTS13Q9NVM9 706 aa12.96□□□□□ -0.33
TRUB1-201ENST00000298746 MON2Q7Z3U7 1717 aa12.96□□□□□ -0.33
TRUB1-201ENST00000298746 ENC1O14682 589 aa12.96□□□□□ -0.33
TRUB1-201ENST00000298746 MNAT1P51948 309 aa12.96□□□□□ -0.33
TRUB1-201ENST00000298746 BEND6Q5SZJ8 279 aaPredicted RBP12.96□□□□□ -0.33
TRUB1-201ENST00000298746 CMTR1Q8N1G2 835 aaKnown RBP12.96□□□□□ -0.33
TRUB1-201ENST00000298746 PUS3Q9BZE2 481 aaKnown RBP12.96□□□□□ -0.33
TRUB1-201ENST00000298746 ADGRG1Q9Y653 693 aa12.96□□□□□ -0.33
TRUB1-201ENST00000298746 FAM208AQ9UK61 1670 aaKnown RBP12.96□□□□□ -0.34
TRUB1-201ENST00000298746 PPP6R2O75170 966 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
TRUB1-201ENST00000298746 CASP1P29466 404 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 SART3Q15020 963 aaKnown RBP12.95□□□□□ -0.34
TRUB1-201ENST00000298746 CCDC70Q6NSX1 233 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 RAD9BQ6WBX8 426 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 DIS3L2Q8IYB7 885 aaKnown RBP12.95□□□□□ -0.34
TRUB1-201ENST00000298746 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRUB1-201ENST00000298746 RNF40O75150 1001 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 MAP9Q49MG5 647 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 SLC9C2Q5TAH2 1124 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 KIAA1328Q86T90 577 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 RUFY1Q96T51 708 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 ZKSCAN3Q9BRR0 538 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 MKRN1Q9UHC7 482 aaKnown RBP12.95□□□□□ -0.34
TRUB1-201ENST00000298746 DENND2AQ9ULE3 1009 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 SPATA31D1Q6ZQQ2 1576 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 ERICH2A1L162 156 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 UBE2Q2LH0YL09 131 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 IBSPP21815 317 aaPredicted RBP12.95□□□□□ -0.34
TRUB1-201ENST00000298746 MAGEA9P43362 315 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 ZAP70P43403 619 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 FKBP15Q5T1M5 1219 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 RESP18Q5W5W9 173 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 FAM71BQ8TC56 605 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 KIFC2Q96AC6 838 aa12.95□□□□□ -0.34
TRUB1-201ENST00000298746 PUS7LQ9H0K6 701 aaKnown RBP12.95□□□□□ -0.34
TRUB1-201ENST00000298746 EYA2O00167 538 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 MATR3P43243 847 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRUB1-201ENST00000298746 LIG3P49916 1009 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 AGXT2Q9BYV1 514 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms