RNA–Protein interactions for RNA: ENST00000296953.6

CREBRF-201, Transcript of CREB3 regulatory factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CREBRF, Length 7,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-201ENST00000296953 FAM43BQ6ZT52 329 aaPredicted RBP3.56□□□□□ -1.84
CREBRF-201ENST00000296953 LZICQ8WZA0 190 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 CCDC162PA2VCL2 907 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 PIP4K2BP78356 416 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 CKAP4Q07065 602 aaKnown RBP3.56□□□□□ -1.84
CREBRF-201ENST00000296953 ADCY1Q08828 1119 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 TBC1D8BQ0IIM8 1120 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 PPFIA1Q13136 1202 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 BYSLQ13895 437 aaKnown RBP3.56□□□□□ -1.84
CREBRF-201ENST00000296953 ATP2B3Q16720 1220 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 SH2D4BQ5SQS7 431 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 CFAP58Q5T655 872 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 LINC00299Q6ZSB3 139 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 UBE2Q1Q7Z7E8 422 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 C7orf31Q8N865 590 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 CCDC28BQ9BUN5 200 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 NUP62CLQ9H1M0 184 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 GMEB1Q9Y692 573 aa3.56□□□□□ -1.84
CREBRF-201ENST00000296953 XRN1Q8IZH2 1706 aaKnown RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 ERVV-2B6SEH9 535 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 PEX1O43933 1283 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 PRPF6O94906 941 aaKnown RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 TBXAS1P24557 533 aaPredicted RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 SLC8A1P32418 973 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 TCP11L2Q8N4U5 519 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 PHAXQ9H814 394 aaKnown RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 RBM27Q9P2N5 1060 aaKnown RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 TRIM77I1YAP6 450 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 LIN7AO14910 233 aaPredicted RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 GLRX3O76003 335 aaKnown RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 FESP07332 822 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 HARSP12081 509 aaKnown RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 TCIRG1Q13488 830 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 CHD1LQ86WJ1 897 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 GPR161Q8N6U8 529 aaKnown RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 TTC9Q92623 222 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 GFM2Q969S9 779 aaKnown RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 NAP1L3Q99457 506 aaPredicted RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 APAF1O14727 1248 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 EZRP15311 586 aaKnown RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 ARID4AP29374 1257 aaPredicted RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 RAB15P59190 212 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 IFT88Q13099 833 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 SYNE3Q6ZMZ3 975 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 DTNBP1Q96EV8 351 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 PANK3Q9H999 370 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 NDUFA13Q9P0J0 144 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 LIMCH1Q9UPQ0 1083 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 SIGLEC16A6NMB1 481 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 OPA1O60313 960 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 GBP1P32455 592 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 TRIM14Q14142 442 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 ANKRD39Q53RE8 183 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 MMS22LQ6ZRQ5 1243 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 LLPHQ9BRT6 129 aaKnown RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 DNAI1Q9UI46 699 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 SBF2Q86WG5 1849 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 SRGAP3O43295 1099 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 SMC2O95347 1197 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 TMEM259Q4ZIN3 620 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 SPDYAQ5MJ70 313 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 EPAS1Q99814 870 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 TRIM5Q9C035 493 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 ANKRD6Q9Y2G4 727 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 TMEM110-MUSTN1A8MSY1 372 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 EFCAB8A8MWE9 144 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 FAM25EA8MYX2 175 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 CDKL5O76039 1030 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 GALTP07902 379 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 RAG1P15918 1043 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 ATP5JP18859 108 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 POSTNQ15063 836 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 SGSM1Q2NKQ1 1148 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 PLCD3Q8N3E9 789 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 EIF1ADQ8N9N8 165 aaKnown RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 MIPOL1Q8TD10 442 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 SORT1Q99523 831 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 HELLSQ9NRZ9 838 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 IFT57Q9NWB7 429 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 BLOC1S6Q9UL45 172 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 RPL26L1Q9UNX3 145 aaKnown RBP3.55□□□□□ -1.84
CREBRF-201ENST00000296953 ZDHHC9Q9Y397 364 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 TOPAZ1Q8N9V7 1692 aa3.55□□□□□ -1.84
CREBRF-201ENST00000296953 DDX60LQ5H9U9 1706 aaKnown RBP3.54□□□□□ -1.84
CREBRF-201ENST00000296953 U2AF1L5P0DN76 240 aaPredicted RBP3.54□□□□□ -1.84
CREBRF-201ENST00000296953 MRPS25P82663 173 aaKnown RBP3.54□□□□□ -1.84
CREBRF-201ENST00000296953 U2AF1Q01081 240 aaKnown RBP eCLIP3.54□□□□□ -1.84
CREBRF-201ENST00000296953 CEP128Q6ZU80 1094 aa3.54□□□□□ -1.84
CREBRF-201ENST00000296953 DRC7Q8IY82 874 aa3.54□□□□□ -1.84
CREBRF-201ENST00000296953 TRIML1Q8N9V2 468 aa3.54□□□□□ -1.84
CREBRF-201ENST00000296953 FHOD1Q9Y613 1164 aa3.54□□□□□ -1.84
CREBRF-201ENST00000296953 ZNF532Q9HCE3 1301 aa3.54□□□□□ -1.84
CREBRF-201ENST00000296953 CCDC184Q52MB2 194 aa3.54□□□□□ -1.84
CREBRF-201ENST00000296953 NBPF6Q5VWK0 638 aa3.54□□□□□ -1.84
CREBRF-201ENST00000296953 NBPF5PQ86XG9 351 aaPredicted RBP3.54□□□□□ -1.84
CREBRF-201ENST00000296953 NBPF4Q96M43 638 aa3.54□□□□□ -1.84
CREBRF-201ENST00000296953 CCDC114Q96M63 670 aa3.54□□□□□ -1.84
CREBRF-201ENST00000296953 EBF2Q9HAK2 575 aa3.54□□□□□ -1.84
CREBRF-201ENST00000296953 NUP188Q5SRE5 1749 aa3.54□□□□□ -1.84
CREBRF-201ENST00000296953 CHUKO15111 745 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms