RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TICAM2Q86XR7 235 aa19.42■□□□□ 0.7
SHANK1-201ENST00000293441 CCDC117Q8IWD4 279 aaPredicted RBP19.42■□□□□ 0.7
SHANK1-201ENST00000293441 ATP7AQ04656 1500 aa19.42■□□□□ 0.7
SHANK1-201ENST00000293441 NDC80O14777 642 aa19.42■□□□□ 0.7
SHANK1-201ENST00000293441 MXRA7P84157 204 aa19.42■□□□□ 0.7
SHANK1-201ENST00000293441 ANGEL1Q9UNK9 670 aaKnown RBP19.42■□□□□ 0.7
SHANK1-201ENST00000293441 C6orf163Q5TEZ5 329 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 MYL10Q9BUA6 226 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 PPIP5K2O43314 1243 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 PPP1R9BQ96SB3 815 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 SMIM23A6NLE4 172 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 ALDH1B1P30837 517 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 NOC4LQ9BVI4 516 aaKnown RBP19.41■□□□□ 0.7
SHANK1-201ENST00000293441 SHANK2Q9UPX8 1470 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 ZNF569Q5MCW4 686 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 HAUS3Q68CZ6 603 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 LUC7L2Q9Y383 392 aaKnown RBP19.41■□□□□ 0.7
SHANK1-201ENST00000293441 ARHGEF35A5YM69 484 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 TRIM6Q9C030 488 aaPredicted RBP19.41■□□□□ 0.7
SHANK1-201ENST00000293441 ZNF532Q9HCE3 1301 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 ZAP70P43403 619 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 HOOK2Q96ED9 719 aa19.41■□□□□ 0.7
SHANK1-201ENST00000293441 NOLC1Q14978 699 aaKnown RBP eCLIP19.4■□□□□ 0.7
SHANK1-201ENST00000293441 PPP1R7Q15435 360 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 TRERF1Q96PN7 1200 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 ZBTB9Q96C00 473 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 MAPK8IP1Q9UQF2 711 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 CCDC25Q86WR0 208 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 SMC5Q8IY18 1101 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 GCKRQ14397 625 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 MCM6Q14566 821 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 HOXB7P09629 217 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 DLGAP5Q15398 846 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 RILPL1Q5EBL4 403 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 SELENOSQ9BQE4 189 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 TXNDC16Q9P2K2 825 aa19.4■□□□□ 0.7
SHANK1-201ENST00000293441 RNF34Q969K3 372 aa19.39■□□□□ 0.7
SHANK1-201ENST00000293441 ZFP91Q96JP5 570 aaPredicted RBP19.39■□□□□ 0.7
SHANK1-201ENST00000293441 STX10O60499 249 aa19.39■□□□□ 0.69
SHANK1-201ENST00000293441 TRPC3Q13507 836 aa19.39■□□□□ 0.69
SHANK1-201ENST00000293441 RAB3IL1Q8TBN0 382 aa19.39■□□□□ 0.69
SHANK1-201ENST00000293441 KIFAP3Q92845 792 aa19.39■□□□□ 0.69
SHANK1-201ENST00000293441 ADCY7P51828 1080 aa19.39■□□□□ 0.69
SHANK1-201ENST00000293441 AGTPBP1Q9UPW5 1226 aa19.39■□□□□ 0.69
SHANK1-201ENST00000293441 CNNM4Q6P4Q7 775 aa19.39■□□□□ 0.69
SHANK1-201ENST00000293441 CERS3Q8IU89 383 aa19.39■□□□□ 0.69
SHANK1-201ENST00000293441 INTS4Q96HW7 963 aaKnown RBP19.39■□□□□ 0.69
SHANK1-201ENST00000293441 CALUO43852 315 aaPredicted RBP19.39■□□□□ 0.69
SHANK1-201ENST00000293441 MAPK8IP2Q13387 824 aaPredicted RBP19.39■□□□□ 0.69
SHANK1-201ENST00000293441 BAG6P46379 1132 aa19.38■□□□□ 0.69
SHANK1-201ENST00000293441 KIFC2Q96AC6 838 aa19.38■□□□□ 0.69
SHANK1-201ENST00000293441 PDE6BP35913 854 aa19.38■□□□□ 0.69
SHANK1-201ENST00000293441 NSMFQ6X4W1 530 aa19.38■□□□□ 0.69
SHANK1-201ENST00000293441 IFT81Q8WYA0 676 aa19.38■□□□□ 0.69
SHANK1-201ENST00000293441 ARFGAP3Q9NP61 516 aa19.38■□□□□ 0.69
SHANK1-201ENST00000293441 ZNF496Q96IT1 587 aaPredicted RBP19.38■□□□□ 0.69
SHANK1-201ENST00000293441 GTF2IP78347 998 aa19.38■□□□□ 0.69
SHANK1-201ENST00000293441 SNX14Q9Y5W7 946 aa19.38■□□□□ 0.69
SHANK1-201ENST00000293441 CFBP00751 764 aa19.38■□□□□ 0.69
SHANK1-201ENST00000293441 VPS16Q9H269 839 aa19.38■□□□□ 0.69
SHANK1-201ENST00000293441 FAM169AQ9Y6X4 670 aa19.38■□□□□ 0.69
SHANK1-201ENST00000293441 SLC8A3P57103 927 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 PHKBQ93100 1093 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 NSRP1Q9H0G5 558 aaKnown RBP19.37■□□□□ 0.69
SHANK1-201ENST00000293441 BCS1LQ9Y276 419 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 PNMA6EA0A0J9YXQ4 647 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 FAM47AQ5JRC9 791 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 ANO1Q5XXA6 986 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 BEGAINQ9BUH8 593 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 PBRM1Q86U86 1689 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 TTC38Q5R3I4 469 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 GOLGA1Q92805 767 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 PRIMPOLQ96LW4 560 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 POLR2DO15514 142 aaKnown RBP19.37■□□□□ 0.69
SHANK1-201ENST00000293441 USP40Q9NVE5 1235 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 AZI2Q9H6S1 392 aa19.37■□□□□ 0.69
SHANK1-201ENST00000293441 CHL1O00533 1208 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 SEL1L2Q5TEA6 688 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 FBF1Q8TES7 1133 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 TSGA10Q9BZW7 698 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 TBC1D7Q9P0N9 293 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 DNMT1P26358 1616 aaKnown RBP19.36■□□□□ 0.69
SHANK1-201ENST00000293441 H7C1D1 291 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 CTSWP56202 376 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 IRX3P78415 501 aaPredicted RBP19.36■□□□□ 0.69
SHANK1-201ENST00000293441 TCIRG1Q13488 830 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 ATL3Q6DD88 541 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 KBTBD3Q8NAB2 608 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 TNFAIP3P21580 790 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 STMN4Q9H169 189 aaPredicted RBP19.36■□□□□ 0.69
SHANK1-201ENST00000293441 EXOC7Q9UPT5 735 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.36■□□□□ 0.69
SHANK1-201ENST00000293441 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.36■□□□□ 0.69
SHANK1-201ENST00000293441 TRIM35Q9UPQ4 493 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 V9GYY5 206 aaPredicted RBP19.36■□□□□ 0.69
SHANK1-201ENST00000293441 hCG_1642624A0A1W2PR95 340 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 MYL5Q02045 173 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 LEO1Q8WVC0 666 aaPredicted RBP19.36■□□□□ 0.69
SHANK1-201ENST00000293441 GLT8D2Q9H1C3 349 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 ARHGEF12Q9NZN5 1544 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms