RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 VCX3BQ9H321 246 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 RAB17Q9H0T7 212 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 VCXQ9H320 206 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 NAPGQ99747 312 aaPredicted RBP16.56■□□□□ 0.24
SEC16A-202ENST00000290037 ANKARQ7Z5J8 1434 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 CHL1O00533 1208 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 EIF4A2Q14240 407 aaKnown RBP16.56■□□□□ 0.24
SEC16A-202ENST00000290037 FYB2Q5VWT5 728 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 GPR108Q9NPR9 543 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 NKIRAS1Q9NYS0 192 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.56■□□□□ 0.242e-6■■□□□ 11.5
SEC16A-202ENST00000290037 SEMA3EO15041 775 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 BUB1BO60566 1050 aaPredicted RBP16.56■□□□□ 0.24
SEC16A-202ENST00000290037 SLC4A4Q9Y6R1 1079 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 ERVV-2B6SEH9 535 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 CCDC8Q9H0W5 538 aaPredicted RBP16.56■□□□□ 0.24
SEC16A-202ENST00000290037 DNAI1Q9UI46 699 aa16.56■□□□□ 0.24
SEC16A-202ENST00000290037 EXOC8Q8IYI6 725 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 DACT1Q9NYF0 836 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 CPSF1Q10570 1443 aaKnown RBP16.55■□□□□ 0.24
SEC16A-202ENST00000290037 FAM13AO94988 1023 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 IDEP14735 1019 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 TRPC3Q13507 836 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 UTP11Q9Y3A2 253 aaKnown RBP16.55■□□□□ 0.24
SEC16A-202ENST00000290037 PHLPP2Q6ZVD8 1323 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 P3H4Q92791 437 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 RNF14Q9UBS8 474 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 ABCC4O15439 1325 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 PER1O15534 1290 aaPredicted RBP16.55■□□□□ 0.24
SEC16A-202ENST00000290037 PPFIA4O75335 1185 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 BCRP11274 1271 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 C20orf194Q5TEA3 1177 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 RETREG2Q8NC44 543 aa16.55■□□□□ 0.24
SEC16A-202ENST00000290037 RBM6P78332 1123 aaKnown RBP16.55■□□□□ 0.24
SEC16A-202ENST00000290037 PSDA5PKW4 1024 aaPredicted RBP16.54■□□□□ 0.24
SEC16A-202ENST00000290037 FBF1Q8TES7 1133 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 SMARCC2Q8TAQ2 1214 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 PARP1P09874 1014 aaKnown RBP16.54■□□□□ 0.24
SEC16A-202ENST00000290037 LMAN1P49257 510 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 DAAM2Q86T65 1068 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 THAP12O43422 761 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 RBM10P98175 930 aaKnown RBP16.54■□□□□ 0.24
SEC16A-202ENST00000290037 CCDC113Q9H0I3 377 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 NOL3O60936 208 aaKnown RBP16.54■□□□□ 0.24
SEC16A-202ENST00000290037 C10orf76Q5T2E6 689 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 STK11IPQ8N1F8 1099 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 ARHGEF10LQ9HCE6 1279 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 CYP7A1P22680 504 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 BBOF1Q8ND07 529 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 GOLGA6CA6NDK9 693 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 GOLGA6BA6NDN3 693 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 GOLGA6DP0CG33 693 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 RGS22Q8NE09 1264 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 GOLGA6AQ9NYA3 693 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 TXNDC16Q9P2K2 825 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 MTMR7Q9Y216 660 aa16.54■□□□□ 0.24
SEC16A-202ENST00000290037 SLC9C1Q4G0N8 1177 aa16.53■□□□□ 0.24
SEC16A-202ENST00000290037 PAK2Q13177 524 aa16.53■□□□□ 0.24
SEC16A-202ENST00000290037 SLC9C2Q5TAH2 1124 aa16.53■□□□□ 0.24
SEC16A-202ENST00000290037 UBA5Q9GZZ9 404 aa16.53■□□□□ 0.24
SEC16A-202ENST00000290037 ATG3Q9NT62 314 aa16.53■□□□□ 0.24
SEC16A-202ENST00000290037 UBXN1Q04323 297 aa16.53■□□□□ 0.24
SEC16A-202ENST00000290037 SGSM2O43147 1006 aa16.53■□□□□ 0.24
SEC16A-202ENST00000290037 WHAMMP3Q1A5X7 153 aa16.53■□□□□ 0.24
SEC16A-202ENST00000290037 RNF187Q5TA31 235 aaPredicted RBP16.53■□□□□ 0.24
SEC16A-202ENST00000290037 CACNA2D3Q8IZS8 1091 aa16.53■□□□□ 0.24
SEC16A-202ENST00000290037 OTUD6BQ8N6M0 293 aa16.53■□□□□ 0.24
SEC16A-202ENST00000290037 XRCC6P12956 609 aaKnown RBP eCLIP16.53■□□□□ 0.244e-7■□□□□ 8.4
SEC16A-202ENST00000290037 ORC2Q13416 577 aaPredicted RBP16.53■□□□□ 0.24
SEC16A-202ENST00000290037 PPP1R1BQ9UD71 204 aaPredicted RBP16.53■□□□□ 0.24
SEC16A-202ENST00000290037 BRDTQ58F21 947 aaPredicted RBP16.53■□□□□ 0.24
SEC16A-202ENST00000290037 EVCP57679 992 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 WDR44Q5JSH3 913 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 PCDHB15Q9Y5E8 787 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 KIF3CO14782 793 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 SMARCA5O60264 1052 aaPredicted RBP16.52■□□□□ 0.24
SEC16A-202ENST00000290037 TOM1O60784 492 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 CCT2P78371 535 aaKnown RBP16.52■□□□□ 0.24
SEC16A-202ENST00000290037 TRIM58Q8NG06 486 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 BICD1Q96G01 975 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 EYA2O00167 538 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 KBTBD3Q8NAB2 608 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 PPFIBP2Q8ND30 876 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 MYRIPQ8NFW9 859 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 XAGE3Q8WTP9 111 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 GMNNO75496 209 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 LDHBP07195 334 aaKnown RBP16.52■□□□□ 0.24
SEC16A-202ENST00000290037 SETSIPP0DME0 302 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 ARPP21Q9UBL0 812 aaPredicted RBP16.52■□□□□ 0.24
SEC16A-202ENST00000290037 SYNRGQ9UMZ2 1314 aa16.52■□□□□ 0.24
SEC16A-202ENST00000290037 ABCC12Q96J65 1359 aa16.52■□□□□ 0.23
SEC16A-202ENST00000290037 SEPT2Q15019 361 aa16.52■□□□□ 0.23
SEC16A-202ENST00000290037 PHLDB2Q86SQ0 1253 aa16.52■□□□□ 0.23
SEC16A-202ENST00000290037 PLEKHG3A1L390 1219 aa16.52■□□□□ 0.23
SEC16A-202ENST00000290037 PTPDC1A2A3K4 754 aa16.52■□□□□ 0.23
SEC16A-202ENST00000290037 ATP11AP98196 1134 aa16.52■□□□□ 0.23
SEC16A-202ENST00000290037 CFAP221Q4G0U5 840 aa16.52■□□□□ 0.23
SEC16A-202ENST00000290037 IGHDP01880 384 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 ANO1Q5XXA6 986 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 RAB3IL1Q8TBN0 382 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms