RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 PKP1Q13835 747 aa28.81■■■□□ 2.2
R3HCC1-201ENST00000265806 DACT2Q5SW24 774 aa28.81■■■□□ 2.2
R3HCC1-201ENST00000265806 MTA3Q9BTC8 594 aa28.81■■■□□ 2.2
R3HCC1-201ENST00000265806 KCNQ5Q9NR82 932 aa28.81■■■□□ 2.2
R3HCC1-201ENST00000265806 ZSWIM5Q9P217 1185 aa28.81■■■□□ 2.2
R3HCC1-201ENST00000265806 TTF2Q9UNY4 1162 aaKnown RBP28.81■■■□□ 2.2
R3HCC1-201ENST00000265806 ZNF646O15015 1829 aaPredicted RBP28.81■■■□□ 2.2
R3HCC1-201ENST00000265806 USP17L3A6NCW0 530 aa28.8■■■□□ 2.2
R3HCC1-201ENST00000265806 USP17L4A6NCW7 530 aa28.8■■■□□ 2.2
R3HCC1-201ENST00000265806 RHBDL3P58872 404 aa28.8■■■□□ 2.2
R3HCC1-201ENST00000265806 STK3Q13188 491 aa28.8■■■□□ 2.2
R3HCC1-201ENST00000265806 USP17L1Q7RTZ2 530 aa28.8■■■□□ 2.2
R3HCC1-201ENST00000265806 MXD3Q9BW11 206 aa28.8■■■□□ 2.2
R3HCC1-201ENST00000265806 ANGEL1Q9UNK9 670 aaKnown RBP28.8■■■□□ 2.2
R3HCC1-201ENST00000265806 KDM4AO75164 1064 aa28.8■■■□□ 2.2
R3HCC1-201ENST00000265806 DALRD3Q5D0E6 543 aaKnown RBP28.8■■■□□ 2.2
R3HCC1-201ENST00000265806 GPHNQ9NQX3 736 aaPredicted RBP28.8■■■□□ 2.2
R3HCC1-201ENST00000265806 CYP2D7A0A087X1C5 515 aa28.79■■■□□ 2.2
R3HCC1-201ENST00000265806 SH2B2O14492 632 aaPredicted RBP28.79■■■□□ 2.2
R3HCC1-201ENST00000265806 PDIA3P30101 505 aaKnown RBP28.79■■■□□ 2.2
R3HCC1-201ENST00000265806 NBR1Q14596 966 aa28.79■■■□□ 2.2
R3HCC1-201ENST00000265806 HHIPL2Q6UWX4 724 aa28.79■■■□□ 2.2
R3HCC1-201ENST00000265806 MRIQ9BWK5 157 aa28.79■■■□□ 2.2
R3HCC1-201ENST00000265806 MCM9Q9NXL9 1143 aa28.79■■■□□ 2.2
R3HCC1-201ENST00000265806 ZDHHC9Q9Y397 364 aa28.79■■■□□ 2.2
R3HCC1-201ENST00000265806 SCRN1Q12765 414 aa28.78■■■□□ 2.2
R3HCC1-201ENST00000265806 IGDCC4Q8TDY8 1250 aa28.78■■■□□ 2.2
R3HCC1-201ENST00000265806 TGFBRAP1Q8WUH2 860 aa28.78■■■□□ 2.2
R3HCC1-201ENST00000265806 CHMP4CQ96CF2 233 aa28.78■■■□□ 2.2
R3HCC1-201ENST00000265806 F8W031 263 aaPredicted RBP28.78■■■□□ 2.2
R3HCC1-201ENST00000265806 GJB2P29033 226 aa28.78■■■□□ 2.2
R3HCC1-201ENST00000265806 CLEC17AQ6ZS10 378 aa28.78■■■□□ 2.2
R3HCC1-201ENST00000265806 CDK5RAP2Q96SN8 1893 aa28.77■■■□□ 2.2
R3HCC1-201ENST00000265806 SMIM22K7EJ46 135 aa28.77■■■□□ 2.2
R3HCC1-201ENST00000265806 BRD1O95696 1058 aa28.77■■■□□ 2.2
R3HCC1-201ENST00000265806 SLC3A2P08195 630 aaKnown RBP28.77■■■□□ 2.2
R3HCC1-201ENST00000265806 TEX11Q8IYF3 940 aa28.77■■■□□ 2.2
R3HCC1-201ENST00000265806 ESR2Q92731 530 aa28.77■■■□□ 2.2
R3HCC1-201ENST00000265806 LLPHQ9BRT6 129 aaKnown RBP28.77■■■□□ 2.2
R3HCC1-201ENST00000265806 TOMM22Q9NS69 142 aa28.77■■■□□ 2.2
R3HCC1-201ENST00000265806 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.77■■■□□ 2.2
R3HCC1-201ENST00000265806 LIFRP42702 1097 aa28.76■■■□□ 2.19
R3HCC1-201ENST00000265806 RRP12Q5JTH9 1297 aaKnown RBP28.76■■■□□ 2.19
R3HCC1-201ENST00000265806 C12orf60Q5U649 245 aa28.76■■■□□ 2.19
R3HCC1-201ENST00000265806 BRPF3Q9ULD4 1205 aa28.76■■■□□ 2.19
R3HCC1-201ENST00000265806 NAV1Q8NEY1 1877 aa28.76■■■□□ 2.19
R3HCC1-201ENST00000265806 YDJCA8MPS7 323 aa28.75■■■□□ 2.19
R3HCC1-201ENST00000265806 ORC4O43929 436 aa28.75■■■□□ 2.19
R3HCC1-201ENST00000265806 USP17L8P0C7I0 530 aa28.75■■■□□ 2.19
R3HCC1-201ENST00000265806 HDLBPQ00341 1268 aaKnown RBP28.75■■■□□ 2.19
R3HCC1-201ENST00000265806 SGMS1Q86VZ5 419 aa28.75■■■□□ 2.19
R3HCC1-201ENST00000265806 TEKT1Q969V4 418 aa28.75■■■□□ 2.19
R3HCC1-201ENST00000265806 PPP1R1BQ9UD71 204 aaPredicted RBP28.75■■■□□ 2.19
R3HCC1-201ENST00000265806 KLF18A0A0U1RQI7 1052 aa28.75■■■□□ 2.19
R3HCC1-201ENST00000265806 AMOTL1Q8IY63 956 aa28.75■■■□□ 2.19
R3HCC1-201ENST00000265806 PSME4Q14997 1843 aa28.75■■■□□ 2.19
R3HCC1-201ENST00000265806 ROBO3Q96MS0 1386 aa28.74■■■□□ 2.19
R3HCC1-201ENST00000265806 CYP2D6P10635 497 aa28.74■■■□□ 2.19
R3HCC1-201ENST00000265806 PDIA4P13667 645 aaKnown RBP28.74■■■□□ 2.19
R3HCC1-201ENST00000265806 NT5C2P49902 561 aa28.74■■■□□ 2.19
R3HCC1-201ENST00000265806 SART3Q15020 963 aaKnown RBP28.74■■■□□ 2.19
R3HCC1-201ENST00000265806 TMEM67Q5HYA8 995 aa28.74■■■□□ 2.19
R3HCC1-201ENST00000265806 STK11IPQ8N1F8 1099 aa28.74■■■□□ 2.19
R3HCC1-201ENST00000265806 GBP4Q96PP9 640 aa28.74■■■□□ 2.19
R3HCC1-201ENST00000265806 LY9Q9HBG7 655 aa28.74■■■□□ 2.19
R3HCC1-201ENST00000265806 IFIT3O14879 490 aaKnown RBP28.73■■■□□ 2.19
R3HCC1-201ENST00000265806 LARGE2Q8N3Y3 721 aa28.73■■■□□ 2.19
R3HCC1-201ENST00000265806 ZNF277Q9NRM2 450 aaPredicted RBP28.73■■■□□ 2.19
R3HCC1-201ENST00000265806 DDX60LQ5H9U9 1706 aaKnown RBP28.73■■■□□ 2.19
R3HCC1-201ENST00000265806 FLT1P17948 1338 aa28.73■■■□□ 2.19
R3HCC1-201ENST00000265806 WDR33Q9C0J8 1336 aaKnown RBP28.73■■■□□ 2.19
R3HCC1-201ENST00000265806 SCNN1DP51172 638 aa28.73■■■□□ 2.19
R3HCC1-201ENST00000265806 MAPKAPK5Q8IW41 473 aa28.73■■■□□ 2.19
R3HCC1-201ENST00000265806 FOCADQ5VW36 1801 aa28.72■■■□□ 2.19
R3HCC1-201ENST00000265806 SYT1P21579 422 aa28.72■■■□□ 2.19
R3HCC1-201ENST00000265806 MCM4P33991 863 aa28.72■■■□□ 2.19
R3HCC1-201ENST00000265806 CRKP46108 304 aa28.72■■■□□ 2.19
R3HCC1-201ENST00000265806 PDE4BQ07343 736 aa28.72■■■□□ 2.19
R3HCC1-201ENST00000265806 SMARCC2Q8TAQ2 1214 aa28.72■■■□□ 2.19
R3HCC1-201ENST00000265806 ZDHHC15Q96MV8 337 aa28.72■■■□□ 2.19
R3HCC1-201ENST00000265806 NAP1L2Q9ULW6 460 aaPredicted RBP28.72■■■□□ 2.19
R3HCC1-201ENST00000265806 HPS5Q9UPZ3 1129 aa28.72■■■□□ 2.19
R3HCC1-201ENST00000265806 FER1L6Q2WGJ9 1857 aa28.71■■■□□ 2.19
R3HCC1-201ENST00000265806 EVX2Q03828 476 aa28.71■■■□□ 2.19
R3HCC1-201ENST00000265806 KIAA0825Q8IV33 1275 aa28.71■■■□□ 2.19
R3HCC1-201ENST00000265806 GOLGA8BA8MQT2 603 aa28.7■■■□□ 2.19
R3HCC1-201ENST00000265806 STX6O43752 255 aa28.7■■■□□ 2.19
R3HCC1-201ENST00000265806 CCT2P78371 535 aaKnown RBP28.7■■■□□ 2.19
R3HCC1-201ENST00000265806 APOBEC3HQ6NTF7 200 aaKnown RBP28.7■■■□□ 2.19
R3HCC1-201ENST00000265806 TMTC2Q8N394 836 aa28.7■■■□□ 2.19
R3HCC1-201ENST00000265806 NSUN7Q8NE18 718 aaKnown RBP28.7■■■□□ 2.19
R3HCC1-201ENST00000265806 ERICH2A1L162 156 aa28.7■■■□□ 2.18
R3HCC1-201ENST00000265806 PDCP20941 246 aa28.7■■■□□ 2.18
R3HCC1-201ENST00000265806 APOA5Q6Q788 366 aa28.7■■■□□ 2.18
R3HCC1-201ENST00000265806 COL4A5P29400 1685 aa28.69■■■□□ 2.18
R3HCC1-201ENST00000265806 MYO3BQ8WXR4 1341 aa28.69■■■□□ 2.18
R3HCC1-201ENST00000265806 CTDNEP1O95476 244 aa28.69■■■□□ 2.18
R3HCC1-201ENST00000265806 IARSP41252 1262 aaKnown RBP28.69■■■□□ 2.18
R3HCC1-201ENST00000265806 KLHL34Q8N239 644 aa28.69■■■□□ 2.18
R3HCC1-201ENST00000265806 UBAC1Q9BSL1 405 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms