RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 LDHDQ86WU2 507 aa6.67□□□□□ -1.34
ITCH-201ENST00000262650 NYXQ9GZU5 481 aa6.67□□□□□ -1.34
ITCH-201ENST00000262650 CGNQ9P2M7 1197 aaKnown RBP6.67□□□□□ -1.34
ITCH-201ENST00000262650 TMCC3Q9ULS5 477 aa6.67□□□□□ -1.34
ITCH-201ENST00000262650 CEP350Q5VT06 3117 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 PRAMEF22A3QJZ6 481 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 C21orf2O43822 256 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 ITGBL1O95965 494 aaPredicted RBP6.66□□□□□ -1.34
ITCH-201ENST00000262650 ALDH1B1P30837 517 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 GTF2F1P35269 517 aaKnown RBP eCLIP6.66□□□□□ -1.342e-6■■■■□ 23
ITCH-201ENST00000262650 ABL2P42684 1182 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 CCDC73Q6ZRK6 1079 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 RELL1Q8IUW5 271 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 TAF4BQ92750 862 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 RTFDC1Q9BY42 306 aaPredicted RBP6.66□□□□□ -1.34
ITCH-201ENST00000262650 PNNQ9H307 717 aaKnown RBP6.66□□□□□ -1.34
ITCH-201ENST00000262650 AS3MTQ9HBK9 375 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 CD248Q9HCU0 757 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 CACNA1FO60840 1977 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 ABCC12Q96J65 1359 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 IQCA1LA6NCM1 817 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 PABPN1LA6NDY0 278 aaKnown RBP6.66□□□□□ -1.34
ITCH-201ENST00000262650 NDUFAF2Q8N183 169 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 ERP27Q96DN0 273 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 GJA3Q9Y6H8 435 aa6.66□□□□□ -1.34
ITCH-201ENST00000262650 PPFIA3O75145 1194 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 PDGFRBP09619 1106 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 HSD3B2P26439 372 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 GNALP38405 381 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 PDIA6Q15084 440 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 MCM10Q7L590 875 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 RTF1Q92541 710 aaKnown RBP6.65□□□□□ -1.34
ITCH-201ENST00000262650 TSR2Q969E8 191 aaKnown RBP6.65□□□□□ -1.34
ITCH-201ENST00000262650 CEP89Q96ST8 783 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 TAF1DQ9H5J8 278 aaPredicted RBP6.65□□□□□ -1.34
ITCH-201ENST00000262650 TAF1P21675 1872 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 PTK7Q13308 1070 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 FAM161AQ3B820 660 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 ERFEQ4G0M1 354 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 ZNF394Q53GI3 561 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 PLPP6Q8IY26 295 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 MYO1HQ8N1T3 1032 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 ZNF396Q96N95 335 aaPredicted RBP6.65□□□□□ -1.34
ITCH-201ENST00000262650 DUSP9Q99956 384 aaKnown RBP6.65□□□□□ -1.34
ITCH-201ENST00000262650 GTPBP4Q9BZE4 634 aaKnown RBP6.65□□□□□ -1.34
ITCH-201ENST00000262650 IP6K2Q9UHH9 426 aa6.65□□□□□ -1.34
ITCH-201ENST00000262650 SPDYE2BA6NHP3 402 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 SPDYE5A6NIY4 337 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 NTSR2O95665 410 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 FOSP01100 380 aaPredicted RBP6.65□□□□□ -1.35
ITCH-201ENST00000262650 NBPF7P0C2Y1 421 aaPredicted RBP6.65□□□□□ -1.35
ITCH-201ENST00000262650 SPDYE6P0CI01 402 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 HLFQ16534 295 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 AMHR2Q16671 573 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 SPDYE2Q495Y8 402 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 SYCP2LQ5T4T6 812 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 IQCEQ6IPM2 695 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 CCSAPQ6IQ19 270 aaPredicted RBP6.65□□□□□ -1.35
ITCH-201ENST00000262650 SUGP1Q8IWZ8 645 aaKnown RBP6.65□□□□□ -1.35
ITCH-201ENST00000262650 RAVER1Q8IY67 606 aaKnown RBP6.65□□□□□ -1.35
ITCH-201ENST00000262650 CHPFQ8IZ52 775 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 TRMT2AQ8IZ69 625 aaKnown RBP6.65□□□□□ -1.35
ITCH-201ENST00000262650 GPC2Q8N158 579 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 SAMD3Q8N6K7 520 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 PGAP2Q9UHJ9 254 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 RABL2BQ9UNT1 228 aa6.65□□□□□ -1.35
ITCH-201ENST00000262650 MYH3P11055 1940 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 UBN2Q6ZU65 1347 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 CDHR2Q9BYE9 1310 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 RASSF10A6NK89 507 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 KIF5CO60282 957 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 TPPPO94811 219 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 CAPN2P17655 700 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 IRX5P78411 483 aaPredicted RBP6.64□□□□□ -1.35
ITCH-201ENST00000262650 AMPD3Q01432 767 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 NFKBIBQ15653 356 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 PARP10Q53GL7 1025 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 ODR4Q5SWX8 454 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 ARMC3Q5W041 872 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 GIGYF2Q6Y7W6 1299 aaKnown RBP6.64□□□□□ -1.35
ITCH-201ENST00000262650 BICDL1Q6ZP65 573 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 CDHR1Q96JP9 859 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 NUCKS1Q9H1E3 243 aaKnown RBP6.64□□□□□ -1.35
ITCH-201ENST00000262650 EFCC1Q9HA90 598 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 UTP6Q9NYH9 597 aaKnown RBP6.64□□□□□ -1.35
ITCH-201ENST00000262650 CLIC5Q9NZA1 410 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 ZNF541Q9H0D2 1346 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 ANKRD33BA6NCL7 494 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 CAPN15O75808 1086 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 IARSP41252 1262 aaKnown RBP6.64□□□□□ -1.35
ITCH-201ENST00000262650 ZBED6P86452 979 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 FAM160A1Q05DH4 1040 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 C8orf34Q49A92 452 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 CLASRPQ8N2M8 674 aaKnown RBP6.64□□□□□ -1.35
ITCH-201ENST00000262650 SNRKQ9NRH2 765 aa6.64□□□□□ -1.35
ITCH-201ENST00000262650 CHCHD3Q9NX63 227 aaKnown RBP6.64□□□□□ -1.35
ITCH-201ENST00000262650 VAMP4O75379 141 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 HOXB7P09629 217 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 TSPAN7P41732 249 aa6.63□□□□□ -1.35
ITCH-201ENST00000262650 RASA3Q14644 834 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms