RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 NAPGQ99747 312 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 GOLGA4Q13439 2230 aaKnown RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 ZNF532Q9HCE3 1301 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 TUBB4AP04350 444 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 RBM6P78332 1123 aaKnown RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 CADPS2Q86UW7 1296 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 ZSCAN29Q8IWY8 852 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 TAB2Q9NYJ8 693 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 RPAP1Q9BWH6 1393 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 KIF5BP33176 963 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 ATP1A3P13637 1013 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 CHMP4BP1P59074 171 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 RNASE9P60153 205 aaKnown RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 CALML4Q96GE6 196 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 PPLO60437 1756 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 BTBD18B2RXH4 712 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 ITGA6P23229 1130 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 CYLC1P35663 651 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 TTC38Q5R3I4 469 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 MAATS1Q7Z4T9 603 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 IFT81Q8WYA0 676 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 PPP1R13BQ96KQ4 1090 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 FGFR1OPO95684 399 aaKnown RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 CAPN2P17655 700 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 NECTIN1Q15223 517 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 KRBA2Q6ZNG9 492 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 STX8Q9UNK0 236 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 ADCY9O60503 1353 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 ATP2C2O75185 946 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 MCM3P25205 808 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 CKAP4Q07065 602 aaKnown RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 ZMYM1Q5SVZ6 1142 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 FAM114A1Q8IWE2 563 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 CRNKL1Q9BZJ0 848 aaKnown RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 RTL9Q8NET4 1388 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 CRB1P82279 1406 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 TMEM266Q2M3C6 531 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 FBXO18Q8NFZ0 1043 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 PCDHA5Q9Y5H7 936 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 WDHD1O75717 1129 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-201ENST00000249837 IGKV5-2P06315 115 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 CCDC122Q5T0U0 273 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 CCDC24Q8N4L8 307 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 DSCC1Q9BVC3 393 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 LUC7L2Q9Y383 392 aaKnown RBP5.22□□□□□ -1.57
VPS13C-201ENST00000249837 SEC31AO94979 1220 aaKnown RBP5.22□□□□□ -1.57
VPS13C-201ENST00000249837 UBXN1Q04323 297 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 MRFAP1L1Q96HT8 127 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 TMEM87BQ96K49 555 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 MYH10P35580 1976 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 ARHGAP6O43182 974 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 CDC25BP30305 580 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 DTHD1Q6ZMT9 781 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 BLZF1Q9H2G9 400 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 ANKIB1Q9P2G1 1089 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 PIK3C2BO00750 1634 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 SSR1P43307 286 aaKnown RBP5.22□□□□□ -1.57
VPS13C-201ENST00000249837 PIP4K2BP78356 416 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 NEK11Q8NG66 645 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 CTAGE1Q96RT6 745 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 MYOM1P52179 1685 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 KRT9P35527 623 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 CDC5LQ99459 802 aaKnown RBP5.22□□□□□ -1.57
VPS13C-201ENST00000249837 CCDC113Q9H0I3 377 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 RMND1Q9NWS8 449 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 ZNF219Q9P2Y4 722 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-201ENST00000249837 SHTN1A0MZ66 631 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 USP8P40818 1118 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 TDRD12Q587J7 1177 aaKnown RBP5.22□□□□□ -1.57
VPS13C-201ENST00000249837 TMTC2Q8N394 836 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 SYNRGQ9UMZ2 1314 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 IFFO1Q0D2I5 559 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 GPATCH11Q8N954 259 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 IQUBQ8NA54 791 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 GDAP1L1Q96MZ0 367 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 A0A1W2PQ27 194 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 A0A1W2PQ64 194 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 A0A1W2PQD8 194 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 ZPR1O75312 459 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 RBM5P52756 815 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS13C-201ENST00000249837 NAPAP54920 295 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 POSTNQ15063 836 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 MAST3O60307 1309 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 IPO4Q8TEX9 1081 aaKnown RBP5.22□□□□□ -1.57
VPS13C-201ENST00000249837 NELFBQ8WX92 580 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 MCM9Q9NXL9 1143 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 SAP30BPQ9UHR5 308 aaKnown RBP5.22□□□□□ -1.57
VPS13C-201ENST00000249837 BMP15O95972 392 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 ZNF654Q8IZM8 581 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 CACNA1FO60840 1977 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 NEXMIFQ5QGS0 1516 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 ARHGEF40Q8TER5 1519 aa5.22□□□□□ -1.57
VPS13C-201ENST00000249837 USP27XA6NNY8 438 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 IL2RBP14784 551 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 ANKRD18AQ8IVF6 992 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 GOLPH3LQ9H4A5 285 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 PDE4DIPQ5VU43 2346 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 KIDINS220Q9ULH0 1771 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 C6orf229H3BNL8 230 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 ZEB2O60315 1214 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms