RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 IFT74Q96LB3 600 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 TRIM6Q9C030 488 aaPredicted RBP11.31□□□□□ -0.6
VIL1-201ENST00000248444 ARPP21Q9UBL0 812 aaPredicted RBP11.31□□□□□ -0.6
VIL1-201ENST00000248444 IBTKQ9P2D0 1353 aaPredicted RBP11.31□□□□□ -0.6
VIL1-201ENST00000248444 BTDP43251 543 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 KIAA0754O94854 1291 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 PPARAQ07869 468 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 MTERF4Q7Z6M4 381 aaKnown RBP11.31□□□□□ -0.6
VIL1-201ENST00000248444 FNBP1Q96RU3 617 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 NCOA5Q9HCD5 579 aaKnown RBP11.31□□□□□ -0.6
VIL1-201ENST00000248444 CNGA1P29973 690 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 STRN3Q13033 797 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 BRINP3Q76B58 766 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 USP26Q9BXU7 913 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 GBP3Q9H0R5 595 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 GREM2Q9H772 168 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 PTGS1P23219 599 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 SPAG1Q07617 926 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 BIRC3Q13489 604 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 ZSCAN23Q3MJ62 389 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 ERFEQ4G0M1 354 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 CEP135Q66GS9 1140 aa11.31□□□□□ -0.6
VIL1-201ENST00000248444 NAA15Q9BXJ9 866 aaKnown RBP11.31□□□□□ -0.6
VIL1-201ENST00000248444 ZNF804BA4D1E1 1349 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.3□□□□□ -0.6
VIL1-201ENST00000248444 IQUBQ8NA54 791 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 GLT8D2Q9H1C3 349 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 TTC12Q9H892 705 aaPredicted RBP11.3□□□□□ -0.6
VIL1-201ENST00000248444 SLC5A4Q9NY91 659 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 FRMD4BQ9Y2L6 1034 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 M0QZ92 97 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 LRRC24Q50LG9 513 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 LRRC45Q96CN5 670 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 CLRN2A0PK11 232 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 NEMFO60524 1076 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 HAUS3Q68CZ6 603 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 AFF2P51816 1311 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 FRMPD2Q68DX3 1309 aaPredicted RBP11.3□□□□□ -0.6
VIL1-201ENST00000248444 ARHGEF35A5YM69 484 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 SORBS3O60504 671 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 MAP9Q49MG5 647 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 DHX37Q8IY37 1157 aaKnown RBP11.3□□□□□ -0.6
VIL1-201ENST00000248444 MBD5Q9P267 1494 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 DNAJC25Q9H1X3 360 aa11.3□□□□□ -0.6
VIL1-201ENST00000248444 hCG_1642624A0A1W2PR95 340 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 IL6STP40189 918 aaPredicted RBP11.29□□□□□ -0.6
VIL1-201ENST00000248444 SSX2IPQ9Y2D8 614 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 CEP83Q9Y592 693 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 GCOM1H8Y6P7 765 aaPredicted RBP11.29□□□□□ -0.6
VIL1-201ENST00000248444 MYZAPP0CAP1 466 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 CYLC1P35663 651 aaPredicted RBP11.29□□□□□ -0.6
VIL1-201ENST00000248444 MRPS9P82933 396 aaKnown RBP11.29□□□□□ -0.6
VIL1-201ENST00000248444 SPOUT1Q5T280 376 aaKnown RBP11.29□□□□□ -0.6
VIL1-201ENST00000248444 C16orf45Q96MC5 204 aaPredicted RBP11.29□□□□□ -0.6
VIL1-201ENST00000248444 DBNDD1Q9H9R9 158 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 XDHP47989 1333 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 USP17L12C9JPN9 530 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 USP17L21D6R901 530 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 DKC1O60832 514 aaKnown RBP eCLIP11.29□□□□□ -0.6
VIL1-201ENST00000248444 UBXN1Q04323 297 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 CERKLQ49MI3 558 aaPredicted RBP11.29□□□□□ -0.6
VIL1-201ENST00000248444 NEK11Q8NG66 645 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 SDR42E1Q8WUS8 393 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 EDC3Q96F86 508 aaKnown RBP11.29□□□□□ -0.6
VIL1-201ENST00000248444 SPC25Q9HBM1 224 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.66e-9■□□□□ 11.3
VIL1-201ENST00000248444 CAVIN2O95810 425 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 KRT5P13647 590 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 PLCD1P51178 756 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 FAM47CQ5HY64 1035 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 AOX1Q06278 1338 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 MCM3P25205 808 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 SMC1AQ14683 1233 aaKnown RBP11.29□□□□□ -0.6
VIL1-201ENST00000248444 ARAP3Q8WWN8 1544 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 USP6P35125 1406 aa11.29□□□□□ -0.6
VIL1-201ENST00000248444 RPL13P26373 211 aaKnown RBP11.28□□□□□ -0.6
VIL1-201ENST00000248444 ARHGEF16Q5VV41 709 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 NCAPG2Q86XI2 1143 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 OTUD6BQ8N6M0 293 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 CHURC1Q8WUH1 139 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 PHKBQ93100 1093 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 LZTS2Q9BRK4 669 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 PLVAPQ9BX97 442 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 GOLGA6L7A0A1B0GV03 622 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 KIAA0753Q2KHM9 967 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 WDR44Q5JSH3 913 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 TMCO3Q6UWJ1 677 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 MSANTD4Q8NCY6 345 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 THRAP3Q9Y2W1 955 aaKnown RBP11.28□□□□□ -0.6
VIL1-201ENST00000248444 SNX14Q9Y5W7 946 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 ESPNB1AK53 854 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 ALAS1P13196 640 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 MAP2K1Q02750 393 aaPredicted RBP11.28□□□□□ -0.6
VIL1-201ENST00000248444 NONOQ15233 471 aaKnown RBP eCLIP11.28□□□□□ -0.6
VIL1-201ENST00000248444 EPB41P11171 864 aaKnown RBP11.28□□□□□ -0.6
VIL1-201ENST00000248444 PABPC4Q13310 644 aaKnown RBP eCLIP11.28□□□□□ -0.6
VIL1-201ENST00000248444 RAPGEF1Q13905 1077 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 DALRD3Q5D0E6 543 aaKnown RBP11.28□□□□□ -0.6
VIL1-201ENST00000248444 ZSCAN30Q86W11 494 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms