RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 CPLX3Q8WVH0 158 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 BBXQ8WY36 941 aaPredicted RBP23.07■■□□□ 1.28
CACTIN-202ENST00000248420 ZKSCAN3Q9BRR0 538 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 C19orf44Q9H6X5 657 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 SEC31BQ9NQW1 1179 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 UBN2Q6ZU65 1347 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 USP49Q70CQ1 688 aa23.06■■□□□ 1.28
CACTIN-202ENST00000248420 DHX58Q96C10 678 aa23.06■■□□□ 1.28
CACTIN-202ENST00000248420 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.06■■□□□ 1.28
CACTIN-202ENST00000248420 MAN1B1Q9UKM7 699 aa23.06■■□□□ 1.28
CACTIN-202ENST00000248420 GOLGA8AA7E2F4 631 aa23.06■■□□□ 1.28
CACTIN-202ENST00000248420 ZBTB43O43298 467 aa23.06■■□□□ 1.28
CACTIN-202ENST00000248420 CTDSPL2Q05D32 466 aa23.06■■□□□ 1.28
CACTIN-202ENST00000248420 PPP2R3AQ06190 1150 aa23.06■■□□□ 1.28
CACTIN-202ENST00000248420 TRIM29Q14134 588 aa23.06■■□□□ 1.28
CACTIN-202ENST00000248420 PROSER2Q86WR7 435 aaPredicted RBP23.06■■□□□ 1.28
CACTIN-202ENST00000248420 LZTFL1Q9NQ48 299 aa23.06■■□□□ 1.28
CACTIN-202ENST00000248420 FAM217BQ9NTX9 383 aaPredicted RBP23.06■■□□□ 1.28
CACTIN-202ENST00000248420 SERTAD1Q9UHV2 236 aa23.06■■□□□ 1.28
CACTIN-202ENST00000248420 FER1L4A9Z1Z3 1794 aa23.06■■□□□ 1.28
CACTIN-202ENST00000248420 CPDO75976 1380 aa23.06■■□□□ 1.28
CACTIN-202ENST00000248420 METTL24Q5JXM2 366 aa23.05■■□□□ 1.28
CACTIN-202ENST00000248420 VGLL3A8MV65 326 aa23.05■■□□□ 1.28
CACTIN-202ENST00000248420 TFRCP02786 760 aaKnown RBP23.05■■□□□ 1.28
CACTIN-202ENST00000248420 OAS2P29728 719 aaKnown RBP23.05■■□□□ 1.28
CACTIN-202ENST00000248420 NTRK3Q16288 839 aa23.05■■□□□ 1.28
CACTIN-202ENST00000248420 SMARCE1Q969G3 411 aa23.05■■□□□ 1.28
CACTIN-202ENST00000248420 MED15Q96RN5 788 aa23.05■■□□□ 1.28
CACTIN-202ENST00000248420 PIH1D3Q9NQM4 214 aaKnown RBP23.05■■□□□ 1.28
CACTIN-202ENST00000248420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.05■■□□□ 1.28
CACTIN-202ENST00000248420 AKAP2Q9Y2D5 859 aa23.05■■□□□ 1.28
CACTIN-202ENST00000248420 COBLO75128 1261 aa23.05■■□□□ 1.28
CACTIN-202ENST00000248420 CASP1P29466 404 aa23.05■■□□□ 1.28
CACTIN-202ENST00000248420 TMEM67Q5HYA8 995 aa23.05■■□□□ 1.28
CACTIN-202ENST00000248420 CC2D1AQ6P1N0 951 aaPredicted RBP23.05■■□□□ 1.28
CACTIN-202ENST00000248420 PARD6BQ9BYG5 372 aa23.05■■□□□ 1.28
CACTIN-202ENST00000248420 MRPL44Q9H9J2 332 aaKnown RBP23.05■■□□□ 1.28
CACTIN-202ENST00000248420 GPTP24298 496 aa23.04■■□□□ 1.28
CACTIN-202ENST00000248420 SOWAHDA6NJG2 315 aa23.04■■□□□ 1.28
CACTIN-202ENST00000248420 TOB1P50616 345 aaPredicted RBP23.04■■□□□ 1.28
CACTIN-202ENST00000248420 MAP3K9P80192 1104 aa23.04■■□□□ 1.28
CACTIN-202ENST00000248420 MDM2Q00987 491 aaPredicted RBP23.04■■□□□ 1.28
CACTIN-202ENST00000248420 NR5A1Q13285 461 aa23.04■■□□□ 1.28
CACTIN-202ENST00000248420 RRP12Q5JTH9 1297 aaKnown RBP23.04■■□□□ 1.28
CACTIN-202ENST00000248420 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.04■■□□□ 1.28
CACTIN-202ENST00000248420 WWC3Q9ULE0 1092 aa23.04■■□□□ 1.28
CACTIN-202ENST00000248420 TUBB4AP04350 444 aa23.03■■□□□ 1.28
CACTIN-202ENST00000248420 IFIT5Q13325 482 aaKnown RBP23.03■■□□□ 1.28
CACTIN-202ENST00000248420 KLHL10Q6JEL2 608 aa23.03■■□□□ 1.28
CACTIN-202ENST00000248420 KRI1Q8N9T8 703 aaKnown RBP23.03■■□□□ 1.28
CACTIN-202ENST00000248420 IGDCC4Q8TDY8 1250 aa23.03■■□□□ 1.28
CACTIN-202ENST00000248420 CCDC12Q8WUD4 166 aaPredicted RBP23.03■■□□□ 1.28
CACTIN-202ENST00000248420 TOMM22Q9NS69 142 aa23.03■■□□□ 1.28
CACTIN-202ENST00000248420 ZNF532Q9HCE3 1301 aa23.03■■□□□ 1.28
CACTIN-202ENST00000248420 TEX33O43247 280 aa23.03■■□□□ 1.28
CACTIN-202ENST00000248420 CUTAO60888 179 aa23.03■■□□□ 1.28
CACTIN-202ENST00000248420 ADD2P35612 726 aa23.03■■□□□ 1.28
CACTIN-202ENST00000248420 STX17P56962 302 aa23.03■■□□□ 1.28
CACTIN-202ENST00000248420 POSTNQ15063 836 aa23.03■■□□□ 1.28
CACTIN-202ENST00000248420 SPECC1LQ69YQ0 1117 aa23.03■■□□□ 1.28
CACTIN-202ENST00000248420 CPLX2Q6PUV4 134 aaKnown RBP23.03■■□□□ 1.28
CACTIN-202ENST00000248420 LDHAL6AQ6ZMR3 332 aa23.03■■□□□ 1.28
CACTIN-202ENST00000248420 SNAP23O00161 211 aa23.02■■□□□ 1.28
CACTIN-202ENST00000248420 TBX2Q13207 712 aaPredicted RBP23.02■■□□□ 1.28
CACTIN-202ENST00000248420 SMC1AQ14683 1233 aaKnown RBP23.02■■□□□ 1.28
CACTIN-202ENST00000248420 HELBQ8NG08 1087 aaPredicted RBP23.02■■□□□ 1.28
CACTIN-202ENST00000248420 SRRTQ9BXP5 876 aaKnown RBP23.02■■□□□ 1.28
CACTIN-202ENST00000248420 PUF60Q9UHX1 559 aaKnown RBP23.02■■□□□ 1.28
CACTIN-202ENST00000248420 MRFAP1Q9Y605 127 aa23.02■■□□□ 1.28
CACTIN-202ENST00000248420 CDKL5O76039 1030 aa23.02■■□□□ 1.28
CACTIN-202ENST00000248420 KIFC2Q96AC6 838 aa23.02■■□□□ 1.28
CACTIN-202ENST00000248420 LY9Q9HBG7 655 aa23.02■■□□□ 1.28
CACTIN-202ENST00000248420 CALCOCO1Q9P1Z2 691 aa23.02■■□□□ 1.28
CACTIN-202ENST00000248420 ZSWIM5Q9P217 1185 aa23.02■■□□□ 1.28
CACTIN-202ENST00000248420 PCDHB6Q9Y5E3 794 aa23.02■■□□□ 1.28
CACTIN-202ENST00000248420 TACC3Q9Y6A5 838 aa23.02■■□□□ 1.28
CACTIN-202ENST00000248420 CAMTA1Q9Y6Y1 1673 aa23.01■■□□□ 1.27
CACTIN-202ENST00000248420 DHX8Q14562 1220 aaKnown RBP23.01■■□□□ 1.27
CACTIN-202ENST00000248420 MPHOSPH8Q99549 860 aa23.01■■□□□ 1.27
CACTIN-202ENST00000248420 IFIT3O14879 490 aaKnown RBP23.01■■□□□ 1.27
CACTIN-202ENST00000248420 DIS3L2Q8IYB7 885 aaKnown RBP23.01■■□□□ 1.27
CACTIN-202ENST00000248420 TEX13AQ9BXU3 409 aaPredicted RBP23.01■■□□□ 1.27
CACTIN-202ENST00000248420 GTF2E1P29083 439 aaPredicted RBP23■■□□□ 1.27
CACTIN-202ENST00000248420 NOSTRINQ8IVI9 506 aa23■■□□□ 1.27
CACTIN-202ENST00000248420 DDX24Q9GZR7 859 aaKnown RBP eCLIP23■■□□□ 1.279e-8■■□□□ 13.6
CACTIN-202ENST00000248420 GREM2Q9H772 168 aa23■■□□□ 1.27
CACTIN-202ENST00000248420 EIF4ENIF1Q9NRA8 985 aaKnown RBP23■■□□□ 1.27
CACTIN-202ENST00000248420 ATG3Q9NT62 314 aa23■■□□□ 1.27
CACTIN-202ENST00000248420 SLC12A7Q9Y666 1083 aa23■■□□□ 1.27
CACTIN-202ENST00000248420 CAPN2P17655 700 aa23■■□□□ 1.27
CACTIN-202ENST00000248420 SSRP1Q08945 709 aaKnown RBP23■■□□□ 1.27
CACTIN-202ENST00000248420 PHKA1P46020 1223 aa22.99■■□□□ 1.27
CACTIN-202ENST00000248420 SMYD4Q8IYR2 804 aaPredicted RBP22.99■■□□□ 1.27
CACTIN-202ENST00000248420 OXER1Q8TDS5 423 aa22.99■■□□□ 1.27
CACTIN-202ENST00000248420 ZFP91Q96JP5 570 aaPredicted RBP22.99■■□□□ 1.27
CACTIN-202ENST00000248420 CNNM1Q9NRU3 951 aa22.99■■□□□ 1.27
CACTIN-202ENST00000248420 STX10O60499 249 aa22.99■■□□□ 1.27
CACTIN-202ENST00000248420 AFMP43652 599 aa22.99■■□□□ 1.27
CACTIN-202ENST00000248420 ARFGAP3Q9NP61 516 aa22.99■■□□□ 1.27
CACTIN-202ENST00000248420 ZNF18P17022 549 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms