RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 PRAG1Q86YV5 1406 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 GAS8O95995 478 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 SNRPA1P09661 255 aaKnown RBP9.16□□□□□ -0.94
APOB-201ENST00000233242 IFIH1Q9BYX4 1025 aaKnown RBP9.16□□□□□ -0.94
APOB-201ENST00000233242 PRDM11Q9NQV5 511 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 CDK13Q14004 1512 aaKnown RBP9.16□□□□□ -0.94
APOB-201ENST00000233242 EPB41P11171 864 aaKnown RBP9.16□□□□□ -0.94
APOB-201ENST00000233242 TRIML1Q8N9V2 468 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 STAG1Q8WVM7 1258 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 FAM114A2Q9NRY5 505 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 HHATQ5VTY9 493 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 TMEM87BQ96K49 555 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 IFT140Q96RY7 1462 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 CCT6AP40227 531 aaKnown RBP9.16□□□□□ -0.94
APOB-201ENST00000233242 MAIP1Q8WWC4 291 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 TMOD3Q9NYL9 352 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 ANKRD13DQ6ZTN6 518 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 SV2BQ7L1I2 683 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 ERCC5P28715 1186 aaPredicted RBP9.16□□□□□ -0.94
APOB-201ENST00000233242 RNASELQ05823 741 aaKnown RBP9.16□□□□□ -0.94
APOB-201ENST00000233242 ANKRD20A3Q5VUR7 823 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 BCAS4Q8TDM0 211 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 HAUS4Q9H6D7 363 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 SNAPC4Q5SXM2 1469 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 SDCCAG8Q86SQ7 713 aaPredicted RBP9.16□□□□□ -0.94
APOB-201ENST00000233242 SMC1BQ8NDV3 1235 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 ERCC3P19447 782 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 POSTNQ15063 836 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 TROVE2P10155 538 aaKnown RBP eCLIP9.16□□□□□ -0.94
APOB-201ENST00000233242 PHLPP2Q6ZVD8 1323 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 HLA-DOAP06340 250 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 STMN1P16949 149 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 TCP1P17987 556 aaKnown RBP9.16□□□□□ -0.94
APOB-201ENST00000233242 RAPGEF1Q13905 1077 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 MMS22LQ6ZRQ5 1243 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 LDHAL6AQ6ZMR3 332 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 ANKIB1Q9P2G1 1089 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 ODF2LQ9ULJ1 636 aa9.16□□□□□ -0.94
APOB-201ENST00000233242 NAPAP54920 295 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 NBPF14Q5TI25 921 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 SPOPO43791 374 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 STX10O60499 249 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 VAMP4O75379 141 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 CCDC65Q8IXS2 484 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 SGSM2O43147 1006 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 DEXIO95424 95 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 LIG3P49916 1009 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 PROSER2Q86WR7 435 aaPredicted RBP9.15□□□□□ -0.94
APOB-201ENST00000233242 PPP2R2CQ9Y2T4 447 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 SLFNL1Q499Z3 407 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 MCTP2Q6DN12 878 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 GLT8D2Q9H1C3 349 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 APOBRQ0VD83 1088 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 LRRC8AQ8IWT6 810 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 XPO4Q9C0E2 1151 aaKnown RBP9.15□□□□□ -0.94
APOB-201ENST00000233242 BLMP54132 1417 aaPredicted RBP9.15□□□□□ -0.94
APOB-201ENST00000233242 RASEFQ8IZ41 740 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 ACTR5Q9H9F9 607 aaPredicted RBP9.15□□□□□ -0.94
APOB-201ENST00000233242 CCDC151A5D8V7 595 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 FAM13AO94988 1023 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 HSPA1LP34931 641 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 FRMD4BQ9Y2L6 1034 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 RRP36Q96EU6 259 aaKnown RBP9.15□□□□□ -0.94
APOB-201ENST00000233242 PDE11AQ9HCR9 933 aa9.15□□□□□ -0.94
APOB-201ENST00000233242 LIN9Q5TKA1 542 aa9.15□□□□□ -0.95
APOB-201ENST00000233242 FAM169AQ9Y6X4 670 aa9.15□□□□□ -0.95
APOB-201ENST00000233242 CCDC169A6NNP5 214 aa9.15□□□□□ -0.95
APOB-201ENST00000233242 ZKSCAN8Q15776 578 aaPredicted RBP9.15□□□□□ -0.95
APOB-201ENST00000233242 ASIC2Q16515 512 aa9.15□□□□□ -0.95
APOB-201ENST00000233242 HEATR3Q7Z4Q2 680 aa9.15□□□□□ -0.95
APOB-201ENST00000233242 OSCARQ8IYS5 282 aa9.15□□□□□ -0.95
APOB-201ENST00000233242 NBPF6Q5VWK0 638 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 ICE2Q659A1 982 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 OR8K1Q8NGG5 319 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 GABPB2Q8TAK5 448 aaPredicted RBP9.14□□□□□ -0.95
APOB-201ENST00000233242 NBPF4Q96M43 638 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 TSPYL2Q9H2G4 693 aaPredicted RBP9.14□□□□□ -0.95
APOB-201ENST00000233242 TRAF5O00463 557 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 MTX1Q13505 466 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 ATP2B3Q16720 1220 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 ADALQ6DHV7 355 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 SNRKQ9NRH2 765 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 BABAM1Q9NWV8 329 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 DNMBPQ6XZF7 1577 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 TRIM37O94972 964 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 ZC3H6P61129 1189 aaKnown RBP9.14□□□□□ -0.95
APOB-201ENST00000233242 RBM6P78332 1123 aaKnown RBP9.14□□□□□ -0.95
APOB-201ENST00000233242 CSGALNACT2Q8N6G5 542 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 TDRD7Q8NHU6 1098 aaKnown RBP9.14□□□□□ -0.95
APOB-201ENST00000233242 DDX27Q96GQ7 796 aaKnown RBP9.14□□□□□ -0.95
APOB-201ENST00000233242 HMGXB3Q12766 1538 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 TOPBP1Q92547 1522 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 CTNNA1P35221 906 aaKnown RBP9.14□□□□□ -0.95
APOB-201ENST00000233242 ABCA10Q8WWZ4 1543 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 KIF1CO43896 1103 aaKnown RBP9.14□□□□□ -0.95
APOB-201ENST00000233242 TSPY3P0CV98 308 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 TSPY8P0CW00 308 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 CNOT10Q9H9A5 744 aaKnown RBP9.14□□□□□ -0.95
APOB-201ENST00000233242 HYOU1Q9Y4L1 999 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 ZBTB7BO15156 539 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms