RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SUPT20HQ8NEM7 779 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 HOXC9P31274 260 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 DNAJC21Q5F1R6 531 aaKnown RBP14.82□□□□□ -0.04
COL1A1-201ENST00000225964 NIM1KQ8IY84 436 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 TXKP42681 527 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 TNNC1P63316 161 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 FMNL3Q8IVF7 1028 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 GCP02774 474 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 PLCD1P51178 756 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 CSRNP2Q9H175 543 aa14.82□□□□□ -0.04
COL1A1-201ENST00000225964 MKRN1Q9UHC7 482 aaKnown RBP14.82□□□□□ -0.04
COL1A1-201ENST00000225964 LUC7L2Q9Y383 392 aaKnown RBP14.82□□□□□ -0.04
COL1A1-201ENST00000225964 CCDC121Q6ZUS5 278 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 DUOX2Q9NRD8 1548 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 DKC1O60832 514 aaKnown RBP eCLIP14.81□□□□□ -0.04
COL1A1-201ENST00000225964 ANO3Q9BYT9 981 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 CNNM4Q6P4Q7 775 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 VPS52Q8N1B4 723 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 PDE8AO60658 829 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 DNM2P50570 870 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 ITIH3Q06033 890 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 CEP85Q6P2H3 762 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 TBC1D31Q96DN5 1066 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 PRPF6O94906 941 aaKnown RBP14.81□□□□□ -0.04
COL1A1-201ENST00000225964 IRX3P78415 501 aaPredicted RBP14.81□□□□□ -0.04
COL1A1-201ENST00000225964 NSMCE1Q8WV22 266 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
COL1A1-201ENST00000225964 A0A1B0GUL7 405 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 CLSTN2Q9H4D0 955 aa14.81□□□□□ -0.04
COL1A1-201ENST00000225964 TAF5LO75529 589 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 CUL4BQ13620 913 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 PARP10Q53GL7 1025 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 ELP1O95163 1332 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 APBA3O96018 575 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 USTQ9Y2C2 406 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 RAPGEF6Q8TEU7 1601 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 TBC1D7Q9P0N9 293 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 TRPM2O94759 1503 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 MNAT1P51948 309 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 KRT24Q2M2I5 525 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 GPR161Q8N6U8 529 aaKnown RBP14.8□□□□□ -0.04
COL1A1-201ENST00000225964 A2MP01023 1474 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 CPLX4Q7Z7G2 160 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 CCDC26Q8TAB7 109 aa14.8□□□□□ -0.04
COL1A1-201ENST00000225964 SMCR8Q8TEV9 937 aaPredicted RBP14.8□□□□□ -0.04
COL1A1-201ENST00000225964 ZBTB24O43167 697 aaPredicted RBP14.79□□□□□ -0.04
COL1A1-201ENST00000225964 ZEB2O60315 1214 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 PRPF31Q8WWY3 499 aaKnown RBP14.79□□□□□ -0.04
COL1A1-201ENST00000225964 ZNF594Q96JF6 807 aaPredicted RBP14.79□□□□□ -0.04
COL1A1-201ENST00000225964 SORBS3O60504 671 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 CTDSPL2Q05D32 466 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 TTLL3Q9Y4R7 772 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 CCDC125Q86Z20 511 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 GSDMBQ8TAX9 411 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 XAGE2Q96GT9 111 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 DEXIO95424 95 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 MYCT1Q8N699 235 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 PLBD2Q8NHP8 589 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 PRIMPOLQ96LW4 560 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 A0A1B0GVL5 298 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 NOLC1Q14978 699 aaKnown RBP eCLIP14.79□□□□□ -0.04
COL1A1-201ENST00000225964 CLUL1Q15846 466 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 GPR162Q16538 588 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 FAM47CQ5HY64 1035 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 CCDC122Q5T0U0 273 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 NOX5Q96PH1 765 aa14.79□□□□□ -0.04
COL1A1-201ENST00000225964 CDCA7Q9BWT1 371 aaPredicted RBP14.79□□□□□ -0.04
COL1A1-201ENST00000225964 HSPA1LP34931 641 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 ADCY7P51828 1080 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 EYA1Q99502 592 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 VPS16Q9H269 839 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 DYNC1I1O14576 645 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 SETDB1Q15047 1291 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 WDR66Q8TBY9 1149 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 VPS18Q9P253 973 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 RNASE9P60153 205 aaKnown RBP14.78□□□□□ -0.04
COL1A1-201ENST00000225964 NSMFQ6X4W1 530 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 EPSTI1Q96J88 318 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 MED10Q9BTT4 135 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 SAMD15Q9P1V8 674 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 MAPK8IP1Q9UQF2 711 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 AKR1B15C9JRZ8 316 aaPredicted RBP14.78□□□□□ -0.04
COL1A1-201ENST00000225964 TIMM10P62072 90 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 VWA3BQ502W6 1294 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 RPUSD2Q8IZ73 545 aaKnown RBP14.78□□□□□ -0.04
COL1A1-201ENST00000225964 PCDHB15Q9Y5E8 787 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 STK24Q9Y6E0 443 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 ASXL2Q76L83 1435 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 RIOK1Q9BRS2 568 aaKnown RBP14.78□□□□□ -0.04
COL1A1-201ENST00000225964 PAGR1Q9BTK6 254 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 POLKQ9UBT6 870 aa14.78□□□□□ -0.04
COL1A1-201ENST00000225964 GCNT3O95395 438 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 SLC1A4P43007 532 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 SATB1Q01826 763 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 KRT222Q8N1A0 295 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 CARD10Q9BWT7 1032 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 CIB2O75838 187 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 IP6K1Q92551 441 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 HAUS2Q9NVX0 235 aa14.77□□□□□ -0.04
COL1A1-201ENST00000225964 EIF2AK4Q9P2K8 1649 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms