RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 FOXP2O15409 715 aa28.94■■■□□ 2.22
RUNDC3A-201ENST00000225441 PRC1O43663 620 aa28.94■■■□□ 2.22
RUNDC3A-201ENST00000225441 RALYLQ86SE5 291 aaKnown RBP28.94■■■□□ 2.22
RUNDC3A-201ENST00000225441 UQCRFS1P1P0C7P4 283 aa28.93■■■□□ 2.22
RUNDC3A-201ENST00000225441 ME1P48163 572 aa28.93■■■□□ 2.22
RUNDC3A-201ENST00000225441 TTLL5Q6EMB2 1281 aa28.93■■■□□ 2.22
RUNDC3A-201ENST00000225441 FSIP1Q8NA03 581 aa28.93■■■□□ 2.22
RUNDC3A-201ENST00000225441 FBXO18Q8NFZ0 1043 aa28.93■■■□□ 2.22
RUNDC3A-201ENST00000225441 C8orf76Q96K31 380 aa28.93■■■□□ 2.22
RUNDC3A-201ENST00000225441 ZNF213O14771 459 aa28.92■■■□□ 2.22
RUNDC3A-201ENST00000225441 ARID4AP29374 1257 aaPredicted RBP28.92■■■□□ 2.22
RUNDC3A-201ENST00000225441 SCARF1Q14162 830 aa28.92■■■□□ 2.22
RUNDC3A-201ENST00000225441 GOLPH3LQ9H4A5 285 aa28.92■■■□□ 2.22
RUNDC3A-201ENST00000225441 CLIP2Q9UDT6 1046 aa28.92■■■□□ 2.22
RUNDC3A-201ENST00000225441 DHX8Q14562 1220 aaKnown RBP28.92■■■□□ 2.22
RUNDC3A-201ENST00000225441 NAP1L2Q9ULW6 460 aaPredicted RBP28.92■■■□□ 2.22
RUNDC3A-201ENST00000225441 WTIPA6NIX2 430 aaPredicted RBP28.91■■■□□ 2.22
RUNDC3A-201ENST00000225441 ZAP70P43403 619 aa28.91■■■□□ 2.22
RUNDC3A-201ENST00000225441 TMC4Q7Z404 712 aa28.91■■■□□ 2.22
RUNDC3A-201ENST00000225441 CEP57L1Q8IYX8 460 aa28.91■■■□□ 2.22
RUNDC3A-201ENST00000225441 FMR1NBQ8N0W7 255 aaPredicted RBP28.91■■■□□ 2.22
RUNDC3A-201ENST00000225441 C17orf53Q8N3J3 647 aaPredicted RBP28.91■■■□□ 2.22
RUNDC3A-201ENST00000225441 MASTLQ96GX5 879 aa28.91■■■□□ 2.22
RUNDC3A-201ENST00000225441 BPIFA3Q9BQP9 254 aa28.91■■■□□ 2.22
RUNDC3A-201ENST00000225441 MCAMP43121 646 aa28.9■■■□□ 2.22
RUNDC3A-201ENST00000225441 CEBPZQ03701 1054 aaKnown RBP28.9■■■□□ 2.22
RUNDC3A-201ENST00000225441 UBE3CQ15386 1083 aa28.9■■■□□ 2.22
RUNDC3A-201ENST00000225441 SLC51AQ86UW1 340 aa28.9■■■□□ 2.22
RUNDC3A-201ENST00000225441 LINC00301Q8NCQ3 95 aa28.9■■■□□ 2.22
RUNDC3A-201ENST00000225441 A0A0G2JLW4 131 aa28.9■■■□□ 2.22
RUNDC3A-201ENST00000225441 BECN2A8MW95 431 aa28.9■■■□□ 2.22
RUNDC3A-201ENST00000225441 C2CD5Q86YS7 1000 aa28.9■■■□□ 2.22
RUNDC3A-201ENST00000225441 PCDHA7Q9UN72 937 aa28.9■■■□□ 2.22
RUNDC3A-201ENST00000225441 XDHP47989 1333 aa28.89■■■□□ 2.22
RUNDC3A-201ENST00000225441 KLF18A0A0U1RQI7 1052 aa28.89■■■□□ 2.22
RUNDC3A-201ENST00000225441 GPAA1O43292 621 aa28.89■■■□□ 2.22
RUNDC3A-201ENST00000225441 CDKL5O76039 1030 aa28.89■■■□□ 2.22
RUNDC3A-201ENST00000225441 ALDH1B1P30837 517 aa28.89■■■□□ 2.22
RUNDC3A-201ENST00000225441 BCAMP50895 628 aa28.89■■■□□ 2.22
RUNDC3A-201ENST00000225441 TRDNQ13061 729 aa28.89■■■□□ 2.22
RUNDC3A-201ENST00000225441 ORC3Q9UBD5 711 aaPredicted RBP28.89■■■□□ 2.22
RUNDC3A-201ENST00000225441 HPS5Q9UPZ3 1129 aa28.89■■■□□ 2.22
RUNDC3A-201ENST00000225441 ZNF804BA4D1E1 1349 aa28.89■■■□□ 2.21
RUNDC3A-201ENST00000225441 C10orf71Q711Q0 1435 aa28.89■■■□□ 2.21
RUNDC3A-201ENST00000225441 PPEF1O14829 653 aaPredicted RBP28.88■■■□□ 2.21
RUNDC3A-201ENST00000225441 ADD2P35612 726 aa28.88■■■□□ 2.21
RUNDC3A-201ENST00000225441 ANKIB1Q9P2G1 1089 aa28.88■■■□□ 2.21
RUNDC3A-201ENST00000225441 LRRC37AA6NMS7 1700 aa28.88■■■□□ 2.21
RUNDC3A-201ENST00000225441 GOLGA8BA8MQT2 603 aa28.87■■■□□ 2.21
RUNDC3A-201ENST00000225441 CPLX1O14810 134 aa28.87■■■□□ 2.21
RUNDC3A-201ENST00000225441 R3HDM1Q15032 1099 aaKnown RBP28.87■■■□□ 2.21
RUNDC3A-201ENST00000225441 STK38Q15208 465 aa28.87■■■□□ 2.21
RUNDC3A-201ENST00000225441 PI16Q6UXB8 463 aa28.87■■■□□ 2.21
RUNDC3A-201ENST00000225441 PUS7LQ9H0K6 701 aaKnown RBP28.87■■■□□ 2.21
RUNDC3A-201ENST00000225441 LEMD3Q9Y2U8 911 aa28.87■■■□□ 2.21
RUNDC3A-201ENST00000225441 ZMYM6O95789 1325 aa28.87■■■□□ 2.21
RUNDC3A-201ENST00000225441 AKAP11Q9UKA4 1901 aa28.87■■■□□ 2.21
RUNDC3A-201ENST00000225441 H0YIN7 160 aa28.87■■■□□ 2.21
RUNDC3A-201ENST00000225441 ZBTB7AO95365 584 aa28.86■■■□□ 2.21
RUNDC3A-201ENST00000225441 GYG1P46976 350 aa28.86■■■□□ 2.21
RUNDC3A-201ENST00000225441 ANTXR2P58335 489 aa28.86■■■□□ 2.21
RUNDC3A-201ENST00000225441 GPSM2P81274 684 aa28.86■■■□□ 2.21
RUNDC3A-201ENST00000225441 SYCP1Q15431 976 aa28.86■■■□□ 2.21
RUNDC3A-201ENST00000225441 ALX1Q15699 326 aa28.86■■■□□ 2.21
RUNDC3A-201ENST00000225441 CAVIN4Q5BKX8 364 aa28.86■■■□□ 2.21
RUNDC3A-201ENST00000225441 STYK1Q6J9G0 422 aa28.86■■■□□ 2.21
RUNDC3A-201ENST00000225441 C11orf57Q6ZUT1 292 aaPredicted RBP28.86■■■□□ 2.21
RUNDC3A-201ENST00000225441 CHST3Q7LGC8 479 aa28.86■■■□□ 2.21
RUNDC3A-201ENST00000225441 SF3A1Q15459 793 aaKnown RBP28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 MYSM1Q5VVJ2 828 aa28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 SYNE3Q6ZMZ3 975 aa28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 SP8Q8IXZ3 490 aa28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 PAXBP1Q9Y5B6 917 aa28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 SPTLC2O15270 562 aa28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 KLRK1P26718 216 aa28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 RASGRF1Q13972 1273 aa28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 CPLX2Q6PUV4 134 aaKnown RBP28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 TMEM87BQ96K49 555 aa28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 FTOQ9C0B1 505 aaKnown RBP eCLIP28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 MTFR1LQ9H019 292 aa28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 ATP6V0A2Q9Y487 856 aa28.85■■■□□ 2.21
RUNDC3A-201ENST00000225441 DHX40Q8IX18 779 aaKnown RBP28.84■■■□□ 2.21
RUNDC3A-201ENST00000225441 ZNF622Q969S3 477 aaKnown RBP eCLIP28.84■■■□□ 2.21
RUNDC3A-201ENST00000225441 FAM84BQ96KN1 310 aaPredicted RBP28.84■■■□□ 2.21
RUNDC3A-201ENST00000225441 SDF4Q9BRK5 362 aa28.84■■■□□ 2.21
RUNDC3A-201ENST00000225441 KCND1Q9NSA2 647 aa28.84■■■□□ 2.21
RUNDC3A-201ENST00000225441 ANGEL1Q9UNK9 670 aaKnown RBP28.84■■■□□ 2.21
RUNDC3A-201ENST00000225441 IRS2Q9Y4H2 1338 aa28.83■■■□□ 2.21
RUNDC3A-201ENST00000225441 CTIFO43310 598 aaKnown RBP28.83■■■□□ 2.21
RUNDC3A-201ENST00000225441 FOSBP53539 338 aa28.83■■■□□ 2.21
RUNDC3A-201ENST00000225441 SPATA5Q8NB90 893 aa28.83■■■□□ 2.21
RUNDC3A-201ENST00000225441 TIGD1Q96MW7 591 aa28.83■■■□□ 2.21
RUNDC3A-201ENST00000225441 GNL3LQ9NVN8 582 aaKnown RBP28.83■■■□□ 2.21
RUNDC3A-201ENST00000225441 PODXL2Q9NZ53 605 aa28.83■■■□□ 2.21
RUNDC3A-201ENST00000225441 GSDMDP57764 484 aa28.83■■■□□ 2.21
RUNDC3A-201ENST00000225441 HAND2P61296 217 aa28.83■■■□□ 2.21
RUNDC3A-201ENST00000225441 GUCY1B3Q02153 619 aa28.83■■■□□ 2.21
RUNDC3A-201ENST00000225441 FBXO33Q7Z6M2 555 aa28.83■■■□□ 2.21
RUNDC3A-201ENST00000225441 KIAA1468Q9P260 1216 aa28.83■■■□□ 2.21
RUNDC3A-201ENST00000225441 IMPACTQ9P2X3 320 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms