RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 NECAB1Q8N987 351 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 KBTBD3Q8NAB2 608 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 TRIM6Q9C030 488 aaPredicted RBP15.59■□□□□ 0.09
GABPB1-201ENST00000220429 RPS6KB1P23443 525 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 ETF1P62495 437 aaKnown RBP15.59■□□□□ 0.09
GABPB1-201ENST00000220429 DNM1Q05193 864 aaKnown RBP15.59■□□□□ 0.09
GABPB1-201ENST00000220429 ADCY2Q08462 1091 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 TRIM28Q13263 835 aaKnown RBP15.59■□□□□ 0.09
GABPB1-201ENST00000220429 AP1ARQ63HQ0 302 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 NUCKS1Q9H1E3 243 aaKnown RBP15.59■□□□□ 0.09
GABPB1-201ENST00000220429 DNAI1Q9UI46 699 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 FAN1Q9Y2M0 1017 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 CIAO1O76071 339 aa15.58■□□□□ 0.08
GABPB1-201ENST00000220429 MCMDC2Q4G0Z9 681 aa15.58■□□□□ 0.08
GABPB1-201ENST00000220429 HOMER1Q86YM7 354 aa15.58■□□□□ 0.08
GABPB1-201ENST00000220429 DDX11Q96FC9 970 aa15.58■□□□□ 0.08
GABPB1-201ENST00000220429 PARD6BQ9BYG5 372 aa15.58■□□□□ 0.08
GABPB1-201ENST00000220429 COL16A1Q07092 1604 aaPredicted RBP15.58■□□□□ 0.08
GABPB1-201ENST00000220429 URI1O94763 535 aaPredicted RBP15.58■□□□□ 0.08
GABPB1-201ENST00000220429 DNAJC25Q9H1X3 360 aa15.58■□□□□ 0.08
GABPB1-201ENST00000220429 PALLDQ8WX93 1383 aa15.58■□□□□ 0.08
GABPB1-201ENST00000220429 GOLGA6L19H0YKK7 550 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 STARD3NLO95772 234 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 NF2P35240 595 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 RBM5P52756 815 aaKnown RBP eCLIP15.57■□□□□ 0.08
GABPB1-201ENST00000220429 GNL2Q13823 731 aaKnown RBP15.57■□□□□ 0.08
GABPB1-201ENST00000220429 KIF6Q6ZMV9 814 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 SLC4A9Q96Q91 983 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 ALDH8A1Q9H2A2 487 aaPredicted RBP15.57■□□□□ 0.08
GABPB1-201ENST00000220429 PAG1Q9NWQ8 432 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 ROBO1Q9Y6N7 1651 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 LAMA4Q16363 1823 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 BCL9O00512 1426 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 SH3TC1Q8TE82 1336 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 PLCH1Q4KWH8 1693 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 GSDMDP57764 484 aa15.57■□□□□ 0.08
GABPB1-201ENST00000220429 TOB2Q14106 344 aaPredicted RBP15.57■□□□□ 0.08
GABPB1-201ENST00000220429 EXOC5O00471 708 aa15.56■□□□□ 0.08
GABPB1-201ENST00000220429 PCCAP05165 728 aaPredicted RBP15.56■□□□□ 0.08
GABPB1-201ENST00000220429 CRYMQ14894 314 aa15.56■□□□□ 0.08
GABPB1-201ENST00000220429 CNNM3Q8NE01 707 aa15.56■□□□□ 0.08
GABPB1-201ENST00000220429 MTMR6Q9Y217 621 aa15.56■□□□□ 0.08
GABPB1-201ENST00000220429 WNK3Q9BYP7 1800 aa15.56■□□□□ 0.08
GABPB1-201ENST00000220429 DDR1Q08345 913 aa15.56■□□□□ 0.08
GABPB1-201ENST00000220429 CCDC57Q2TAC2 916 aa15.56■□□□□ 0.08
GABPB1-201ENST00000220429 SPEF2Q9C093 1822 aa15.56■□□□□ 0.08
GABPB1-201ENST00000220429 MAP3K15Q6ZN16 1313 aa15.56■□□□□ 0.08
GABPB1-201ENST00000220429 LRP6O75581 1613 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 ANKRD36CQ5JPF3 1778 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 NUP98P52948 1817 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 CCDC151A5D8V7 595 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 CAND2O75155 1236 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 RDXP35241 583 aaKnown RBP15.55■□□□□ 0.08
GABPB1-201ENST00000220429 MCM6Q14566 821 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 HLFQ16534 295 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 CCDC85AQ96PX6 553 aaPredicted RBP15.55■□□□□ 0.08
GABPB1-201ENST00000220429 PLA2G12BQ9BX93 195 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 IRAK4Q9NWZ3 460 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 RPS6KL1Q9Y6S9 549 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 U3KPZ7 1027 aaPredicted RBP15.55■□□□□ 0.08
GABPB1-201ENST00000220429 MYH3P11055 1940 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 EIF3JO75822 258 aaKnown RBP15.55■□□□□ 0.08
GABPB1-201ENST00000220429 CAVIN2O95810 425 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 CYP21A2P08686 494 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 GRIK3Q13003 919 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 ANKRD1Q15327 319 aa15.55■□□□□ 0.08
GABPB1-201ENST00000220429 GIGYF2Q6Y7W6 1299 aaKnown RBP15.55■□□□□ 0.08
GABPB1-201ENST00000220429 ZBTB38Q8NAP3 1195 aaPredicted RBP15.55■□□□□ 0.08
GABPB1-201ENST00000220429 ZNF483Q8TF39 744 aaPredicted RBP15.55■□□□□ 0.08
GABPB1-201ENST00000220429 COL22A1Q8NFW1 1626 aaPredicted RBP15.55■□□□□ 0.08
GABPB1-201ENST00000220429 IFIT1P09914 478 aaKnown RBP15.54■□□□□ 0.08
GABPB1-201ENST00000220429 KRT32Q14532 448 aa15.54■□□□□ 0.08
GABPB1-201ENST00000220429 SYNE4Q8N205 404 aa15.54■□□□□ 0.08
GABPB1-201ENST00000220429 SH3GL3Q99963 347 aa15.54■□□□□ 0.08
GABPB1-201ENST00000220429 PAIP2Q9BPZ3 127 aaKnown RBP15.54■□□□□ 0.08
GABPB1-201ENST00000220429 CEP126Q9P2H0 1117 aa15.54■□□□□ 0.08
GABPB1-201ENST00000220429 N4BP1O75113 896 aaKnown RBP15.54■□□□□ 0.08
GABPB1-201ENST00000220429 CSF1RP07333 972 aa15.54■□□□□ 0.08
GABPB1-201ENST00000220429 CYP19A1P11511 503 aaPredicted RBP15.54■□□□□ 0.08
GABPB1-201ENST00000220429 CCNHP51946 323 aaPredicted RBP15.54■□□□□ 0.08
GABPB1-201ENST00000220429 RBM43Q6ZSC3 357 aaKnown RBP15.54■□□□□ 0.08
GABPB1-201ENST00000220429 CABS1Q96KC9 395 aa15.54■□□□□ 0.08
GABPB1-201ENST00000220429 BRD3Q15059 726 aa15.53■□□□□ 0.08
GABPB1-201ENST00000220429 HDXQ7Z353 690 aa15.53■□□□□ 0.08
GABPB1-201ENST00000220429 MSL3Q8N5Y2 521 aaKnown RBP15.53■□□□□ 0.08
GABPB1-201ENST00000220429 PRPF38AQ8NAV1 312 aaKnown RBP15.53■□□□□ 0.08
GABPB1-201ENST00000220429 RABGGTAQ92696 567 aa15.53■□□□□ 0.08
GABPB1-201ENST00000220429 NEK1Q96PY6 1258 aa15.53■□□□□ 0.08
GABPB1-201ENST00000220429 HELLSQ9NRZ9 838 aa15.53■□□□□ 0.08
GABPB1-201ENST00000220429 DACT1Q9NYF0 836 aa15.53■□□□□ 0.08
GABPB1-201ENST00000220429 KCNJ6P48051 423 aa15.53■□□□□ 0.08
GABPB1-201ENST00000220429 ZMYM1Q5SVZ6 1142 aa15.53■□□□□ 0.08
GABPB1-201ENST00000220429 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
GABPB1-201ENST00000220429 ZBTB1Q9Y2K1 713 aa15.53■□□□□ 0.08
GABPB1-201ENST00000220429 PARP3Q9Y6F1 533 aa15.53■□□□□ 0.08
GABPB1-201ENST00000220429 AHDC1Q5TGY3 1603 aaPredicted RBP15.53■□□□□ 0.08
GABPB1-201ENST00000220429 ECM2O94769 699 aaPredicted RBP15.52■□□□□ 0.08
GABPB1-201ENST00000220429 ADORA1P30542 326 aa15.52■□□□□ 0.08
GABPB1-201ENST00000220429 IQCB1Q15051 598 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms