RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.3■■□□□ 1.96
VTI1B-201ENST00000216456 PPATQ06203 517 aa27.29■■□□□ 1.96
VTI1B-201ENST00000216456 SPTY2D1Q68D10 685 aaPredicted RBP27.29■■□□□ 1.96
VTI1B-201ENST00000216456 ARHGAP39Q9C0H5 1083 aa27.29■■□□□ 1.96
VTI1B-201ENST00000216456 EFCC1Q9HA90 598 aa27.29■■□□□ 1.96
VTI1B-201ENST00000216456 PTPN22Q9Y2R2 807 aa27.29■■□□□ 1.96
VTI1B-201ENST00000216456 ZBED9Q6R2W3 1325 aa27.29■■□□□ 1.96
VTI1B-201ENST00000216456 ZSWIM8A7E2V4 1837 aa27.28■■□□□ 1.96
VTI1B-201ENST00000216456 PHF20L1A8MW92 1017 aa27.28■■□□□ 1.96
VTI1B-201ENST00000216456 ENTPD3O75355 529 aa27.28■■□□□ 1.96
VTI1B-201ENST00000216456 SURF6O75683 361 aaKnown RBP27.28■■□□□ 1.96
VTI1B-201ENST00000216456 OS9Q13438 667 aaPredicted RBP27.28■■□□□ 1.96
VTI1B-201ENST00000216456 TNNI3KQ59H18 835 aa27.28■■□□□ 1.96
VTI1B-201ENST00000216456 ZSCAN29Q8IWY8 852 aaPredicted RBP27.28■■□□□ 1.96
VTI1B-201ENST00000216456 NSUN4Q96CB9 384 aaKnown RBP27.28■■□□□ 1.96
VTI1B-201ENST00000216456 FPGT-TNNI3KV9GXZ4 949 aa27.28■■□□□ 1.96
VTI1B-201ENST00000216456 GPR75-ASB3A0A0A6YYF3 556 aa27.27■■□□□ 1.96
VTI1B-201ENST00000216456 MOGSQ13724 837 aa27.27■■□□□ 1.96
VTI1B-201ENST00000216456 TLR7Q9NYK1 1049 aaKnown RBP27.27■■□□□ 1.96
VTI1B-201ENST00000216456 RAI14Q9P0K7 980 aa27.27■■□□□ 1.96
VTI1B-201ENST00000216456 FAM196BA6NMK8 535 aa27.26■■□□□ 1.95
VTI1B-201ENST00000216456 CCDC84Q86UT8 332 aaPredicted RBP27.26■■□□□ 1.95
VTI1B-201ENST00000216456 NOL9Q5SY16 702 aaKnown RBP27.25■■□□□ 1.95
VTI1B-201ENST00000216456 KCNH4Q9UQ05 1017 aa27.25■■□□□ 1.95
VTI1B-201ENST00000216456 DOCK2Q92608 1830 aa27.25■■□□□ 1.95
VTI1B-201ENST00000216456 SLF2Q8IX21 1173 aa27.24■■□□□ 1.95
VTI1B-201ENST00000216456 POTEFA5A3E0 1075 aa27.23■■□□□ 1.95
VTI1B-201ENST00000216456 TLR2O60603 784 aa27.23■■□□□ 1.95
VTI1B-201ENST00000216456 TTC39AQ5SRH9 613 aa27.23■■□□□ 1.95
VTI1B-201ENST00000216456 CCDC8Q9H0W5 538 aaPredicted RBP27.23■■□□□ 1.95
VTI1B-201ENST00000216456 CPA4Q9UI42 421 aa27.23■■□□□ 1.95
VTI1B-201ENST00000216456 UQCRFS1P1P0C7P4 283 aa27.22■■□□□ 1.95
VTI1B-201ENST00000216456 CTGFP29279 349 aa27.22■■□□□ 1.95
VTI1B-201ENST00000216456 CEP85Q6P2H3 762 aa27.22■■□□□ 1.95
VTI1B-201ENST00000216456 LRP2BPQ9P2M1 347 aa27.22■■□□□ 1.95
VTI1B-201ENST00000216456 DBNLQ9UJU6 430 aaKnown RBP27.22■■□□□ 1.95
VTI1B-201ENST00000216456 PTCH2Q9Y6C5 1203 aa27.22■■□□□ 1.95
VTI1B-201ENST00000216456 ZHX2Q9Y6X8 837 aa27.22■■□□□ 1.95
VTI1B-201ENST00000216456 BRCA2P51587 3418 aa27.22■■□□□ 1.95
VTI1B-201ENST00000216456 PDHXO00330 501 aa27.21■■□□□ 1.95
VTI1B-201ENST00000216456 ADGRA1Q86SQ6 560 aa27.21■■□□□ 1.95
VTI1B-201ENST00000216456 SCYL3Q8IZE3 742 aa27.21■■□□□ 1.95
VTI1B-201ENST00000216456 GPR108Q9NPR9 543 aa27.21■■□□□ 1.95
VTI1B-201ENST00000216456 NOP58Q9Y2X3 529 aaKnown RBP27.21■■□□□ 1.95
VTI1B-201ENST00000216456 NDUFB9Q9Y6M9 179 aa27.21■■□□□ 1.95
VTI1B-201ENST00000216456 CYP2E1P05181 493 aaPredicted RBP27.2■■□□□ 1.94
VTI1B-201ENST00000216456 PTPRAP18433 802 aa27.2■■□□□ 1.94
VTI1B-201ENST00000216456 MAP3K10Q02779 954 aa27.2■■□□□ 1.94
VTI1B-201ENST00000216456 GPAT2Q6NUI2 795 aa27.2■■□□□ 1.94
VTI1B-201ENST00000216456 ANKRD23Q86SG2 305 aa27.2■■□□□ 1.94
VTI1B-201ENST00000216456 SH3RF3Q8TEJ3 882 aaPredicted RBP27.2■■□□□ 1.94
VTI1B-201ENST00000216456 EAF2Q96CJ1 260 aaPredicted RBP27.2■■□□□ 1.94
VTI1B-201ENST00000216456 MKI67P46013 3256 aaKnown RBP27.2■■□□□ 1.94
VTI1B-201ENST00000216456 ZAP70P43403 619 aa27.19■■□□□ 1.94
VTI1B-201ENST00000216456 PIH1D3Q9NQM4 214 aaKnown RBP27.19■■□□□ 1.94
VTI1B-201ENST00000216456 EXOC6BQ9Y2D4 811 aa27.19■■□□□ 1.94
VTI1B-201ENST00000216456 MYCP01106 439 aaPredicted RBP27.18■■□□□ 1.94
VTI1B-201ENST00000216456 LDHCP07864 332 aa27.18■■□□□ 1.94
VTI1B-201ENST00000216456 CYP2C8P10632 490 aa27.18■■□□□ 1.94
VTI1B-201ENST00000216456 GSTO1P78417 241 aa27.18■■□□□ 1.94
VTI1B-201ENST00000216456 LACTBP83111 547 aaPredicted RBP27.18■■□□□ 1.94
VTI1B-201ENST00000216456 RRP1BQ14684 758 aaKnown RBP27.18■■□□□ 1.94
VTI1B-201ENST00000216456 C17orf99Q6UX52 265 aa27.18■■□□□ 1.94
VTI1B-201ENST00000216456 ZCCHC17Q9NP64 241 aaKnown RBP27.18■■□□□ 1.94
VTI1B-201ENST00000216456 AATFQ9NY61 560 aaKnown RBP eCLIP27.18■■□□□ 1.94
VTI1B-201ENST00000216456 ADGRA2Q96PE1 1338 aa27.17■■□□□ 1.94
VTI1B-201ENST00000216456 CCDC158Q5M9N0 1113 aa27.17■■□□□ 1.94
VTI1B-201ENST00000216456 TEX11Q8IYF3 940 aa27.17■■□□□ 1.94
VTI1B-201ENST00000216456 OSBPL5Q9H0X9 879 aaPredicted RBP27.17■■□□□ 1.94
VTI1B-201ENST00000216456 PICK1Q9NRD5 415 aa27.17■■□□□ 1.94
VTI1B-201ENST00000216456 AFG3L2Q9Y4W6 797 aa27.17■■□□□ 1.94
VTI1B-201ENST00000216456 NAA16Q6N069 864 aaPredicted RBP27.16■■□□□ 1.94
VTI1B-201ENST00000216456 ARMC5Q96C12 935 aa27.16■■□□□ 1.94
VTI1B-201ENST00000216456 MYO5AQ9Y4I1 1855 aaKnown RBP27.16■■□□□ 1.94
VTI1B-201ENST00000216456 CXCL11O14625 94 aa27.15■■□□□ 1.94
VTI1B-201ENST00000216456 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.15■■□□□ 1.94
VTI1B-201ENST00000216456 A0A0G2JLL6 359 aaPredicted RBP27.14■■□□□ 1.94
VTI1B-201ENST00000216456 TRIM75PA6NK02 468 aa27.14■■□□□ 1.94
VTI1B-201ENST00000216456 GADL1Q6ZQY3 521 aa27.14■■□□□ 1.94
VTI1B-201ENST00000216456 PRRT2Q7Z6L0 340 aaPredicted RBP27.14■■□□□ 1.94
VTI1B-201ENST00000216456 SH3TC2Q8TF17 1288 aa27.14■■□□□ 1.94
VTI1B-201ENST00000216456 PDE4DIPQ5VU43 2346 aa27.14■■□□□ 1.94
VTI1B-201ENST00000216456 CTNND1O60716 968 aaKnown RBP27.13■■□□□ 1.93
VTI1B-201ENST00000216456 EN2P19622 333 aaPredicted RBP27.13■■□□□ 1.93
VTI1B-201ENST00000216456 DYNLL1P63167 89 aaKnown RBP27.13■■□□□ 1.93
VTI1B-201ENST00000216456 MAPKAPK5Q8IW41 473 aa27.13■■□□□ 1.93
VTI1B-201ENST00000216456 TRIM47Q96LD4 638 aa27.13■■□□□ 1.93
VTI1B-201ENST00000216456 DOCK1Q14185 1865 aa27.13■■□□□ 1.93
VTI1B-201ENST00000216456 NPM3O75607 178 aaKnown RBP27.12■■□□□ 1.93
VTI1B-201ENST00000216456 ZNF333Q96JL9 665 aa27.12■■□□□ 1.93
VTI1B-201ENST00000216456 ANTXR1Q9H6X2 564 aa27.12■■□□□ 1.93
VTI1B-201ENST00000216456 IL1RAPL2Q9NP60 686 aa27.12■■□□□ 1.93
VTI1B-201ENST00000216456 COG6Q9Y2V7 657 aa27.12■■□□□ 1.93
VTI1B-201ENST00000216456 PHIPQ8WWQ0 1821 aa27.11■■□□□ 1.93
VTI1B-201ENST00000216456 PSMC4P43686 418 aa27.11■■□□□ 1.93
VTI1B-201ENST00000216456 SHROOM1Q2M3G4 852 aaPredicted RBP27.11■■□□□ 1.93
VTI1B-201ENST00000216456 SLC4A8Q2Y0W8 1093 aa27.11■■□□□ 1.93
VTI1B-201ENST00000216456 SLC9C1Q4G0N8 1177 aa27.11■■□□□ 1.93
VTI1B-201ENST00000216456 TGFBRAP1Q8WUH2 860 aa27.11■■□□□ 1.93
VTI1B-201ENST00000216456 ZNF512BQ96KM6 892 aaPredicted RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms