RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 ZNF112Q9UJU3 913 aa21.14■□□□□ 0.97
MRPL28-201ENST00000199706 NDUFB9Q9Y6M9 179 aa21.14■□□□□ 0.97
MRPL28-201ENST00000199706 GOLIM4O00461 696 aa21.13■□□□□ 0.97
MRPL28-201ENST00000199706 MAP3K9P80192 1104 aa21.13■□□□□ 0.97
MRPL28-201ENST00000199706 KIF23Q02241 960 aaPredicted RBP21.13■□□□□ 0.97
MRPL28-201ENST00000199706 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.13■□□□□ 0.97
MRPL28-201ENST00000199706 TEX11Q8IYF3 940 aa21.13■□□□□ 0.97
MRPL28-201ENST00000199706 SLC10A4Q96EP9 437 aa21.13■□□□□ 0.97
MRPL28-201ENST00000199706 CSRNP1Q96S65 589 aa21.13■□□□□ 0.97
MRPL28-201ENST00000199706 DNAJC2Q99543 621 aaKnown RBP21.13■□□□□ 0.97
MRPL28-201ENST00000199706 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.13■□□□□ 0.97
MRPL28-201ENST00000199706 AATFQ9NY61 560 aaKnown RBP eCLIP21.13■□□□□ 0.97
MRPL28-201ENST00000199706 SALL3Q9BXA9 1300 aa21.12■□□□□ 0.97
MRPL28-201ENST00000199706 TBC1D12O60347 775 aa21.12■□□□□ 0.97
MRPL28-201ENST00000199706 PDE6AP16499 860 aa21.12■□□□□ 0.97
MRPL28-201ENST00000199706 SH3RF3Q8TEJ3 882 aaPredicted RBP21.12■□□□□ 0.97
MRPL28-201ENST00000199706 WNK4Q96J92 1243 aa21.12■□□□□ 0.97
MRPL28-201ENST00000199706 OSBPL5Q9H0X9 879 aaPredicted RBP21.12■□□□□ 0.97
MRPL28-201ENST00000199706 DHX36Q9H2U1 1008 aaKnown RBP21.12■□□□□ 0.97
MRPL28-201ENST00000199706 BOLA2Q9H3K6 86 aa21.12■□□□□ 0.97
MRPL28-201ENST00000199706 ZBTB47Q9UFB7 747 aaPredicted RBP21.12■□□□□ 0.97
MRPL28-201ENST00000199706 FZD1Q9UP38 647 aa21.12■□□□□ 0.97
MRPL28-201ENST00000199706 CSADQ9Y600 493 aa21.12■□□□□ 0.97
MRPL28-201ENST00000199706 ERC2O15083 957 aa21.11■□□□□ 0.97
MRPL28-201ENST00000199706 CTCFP49711 727 aaPredicted RBP21.11■□□□□ 0.97
MRPL28-201ENST00000199706 SREBF2Q12772 1141 aa21.11■□□□□ 0.97
MRPL28-201ENST00000199706 VGLL4Q14135 290 aa21.11■□□□□ 0.97
MRPL28-201ENST00000199706 SLC9C2Q5TAH2 1124 aa21.11■□□□□ 0.97
MRPL28-201ENST00000199706 SH3BP5LQ7L8J4 393 aa21.11■□□□□ 0.97
MRPL28-201ENST00000199706 ZFPM1Q8IX07 1006 aa21.11■□□□□ 0.97
MRPL28-201ENST00000199706 CLMNQ96JQ2 1002 aa21.11■□□□□ 0.97
MRPL28-201ENST00000199706 ZIC5Q96T25 663 aa21.11■□□□□ 0.97
MRPL28-201ENST00000199706 DDX60LQ5H9U9 1706 aaKnown RBP21.11■□□□□ 0.97
MRPL28-201ENST00000199706 TCRBV5S4A2TA0A5A2 114 aa21.1■□□□□ 0.97
MRPL28-201ENST00000199706 MANSC4A6NHS7 340 aaPredicted RBP21.1■□□□□ 0.97
MRPL28-201ENST00000199706 GLRX3O76003 335 aaKnown RBP21.1■□□□□ 0.97
MRPL28-201ENST00000199706 TM4SF4P48230 202 aa21.1■□□□□ 0.97
MRPL28-201ENST00000199706 INHBEP58166 350 aa21.1■□□□□ 0.97
MRPL28-201ENST00000199706 NOL9Q5SY16 702 aaKnown RBP21.1■□□□□ 0.97
MRPL28-201ENST00000199706 WRNIP1Q96S55 665 aa21.1■□□□□ 0.97
MRPL28-201ENST00000199706 RIOK1Q9BRS2 568 aaKnown RBP21.1■□□□□ 0.97
MRPL28-201ENST00000199706 FLT1P17948 1338 aa21.09■□□□□ 0.97
MRPL28-201ENST00000199706 SIPA1L1O43166 1804 aa21.09■□□□□ 0.97
MRPL28-201ENST00000199706 DDTLA6NHG4 134 aaPredicted RBP21.09■□□□□ 0.97
MRPL28-201ENST00000199706 SPDYE5A6NIY4 337 aa21.09■□□□□ 0.97
MRPL28-201ENST00000199706 FOXN1O15353 648 aa21.09■□□□□ 0.97
MRPL28-201ENST00000199706 MX1P20591 662 aa21.09■□□□□ 0.97
MRPL28-201ENST00000199706 PICALMQ13492 652 aa21.09■□□□□ 0.97
MRPL28-201ENST00000199706 UBE3CQ15386 1083 aa21.09■□□□□ 0.97
MRPL28-201ENST00000199706 ZSCAN25Q6NSZ9 544 aa21.09■□□□□ 0.97
MRPL28-201ENST00000199706 PRDM10Q9NQV6 1147 aa21.09■□□□□ 0.97
MRPL28-201ENST00000199706 DOCK1Q14185 1865 aa21.09■□□□□ 0.97
MRPL28-201ENST00000199706 MYH1P12882 1939 aa21.08■□□□□ 0.97
MRPL28-201ENST00000199706 ADD2P35612 726 aa21.08■□□□□ 0.97
MRPL28-201ENST00000199706 METTL16Q86W50 562 aaKnown RBP21.08■□□□□ 0.97
MRPL28-201ENST00000199706 ZSCAN29Q8IWY8 852 aaPredicted RBP21.08■□□□□ 0.97
MRPL28-201ENST00000199706 PI4K2BQ8TCG2 481 aa21.08■□□□□ 0.97
MRPL28-201ENST00000199706 STAP2Q9UGK3 403 aa21.08■□□□□ 0.97
MRPL28-201ENST00000199706 HERC5Q9UII4 1024 aaKnown RBP21.08■□□□□ 0.97
MRPL28-201ENST00000199706 SNCAIPQ9Y6H5 919 aa21.08■□□□□ 0.97
MRPL28-201ENST00000199706 ZNF532Q9HCE3 1301 aa21.07■□□□□ 0.96
MRPL28-201ENST00000199706 PHF20L1A8MW92 1017 aa21.07■□□□□ 0.96
MRPL28-201ENST00000199706 ANKRD45Q5TZF3 282 aa21.07■□□□□ 0.96
MRPL28-201ENST00000199706 TICAM2Q86XR7 235 aa21.07■□□□□ 0.96
MRPL28-201ENST00000199706 ERO1BQ86YB8 467 aa21.07■□□□□ 0.96
MRPL28-201ENST00000199706 KBTBD3Q8NAB2 608 aa21.07■□□□□ 0.96
MRPL28-201ENST00000199706 EDC3Q96F86 508 aaKnown RBP21.07■□□□□ 0.96
MRPL28-201ENST00000199706 CFHR5Q9BXR6 569 aa21.07■□□□□ 0.96
MRPL28-201ENST00000199706 PI4KBQ9UBF8 816 aa21.07■□□□□ 0.96
MRPL28-201ENST00000199706 TAOK2Q9UL54 1235 aa21.07■□□□□ 0.96
MRPL28-201ENST00000199706 NAV1Q8NEY1 1877 aa21.07■□□□□ 0.96
MRPL28-201ENST00000199706 MAGEB6P1A0A0J9YX57 407 aa21.06■□□□□ 0.96
MRPL28-201ENST00000199706 TESPA1A2RU30 521 aaPredicted RBP21.06■□□□□ 0.96
MRPL28-201ENST00000199706 HSPA8P11142 646 aaKnown RBP21.06■□□□□ 0.96
MRPL28-201ENST00000199706 MIGA2Q7L4E1 593 aa21.06■□□□□ 0.96
MRPL28-201ENST00000199706 MIGA1Q8NAN2 632 aa21.06■□□□□ 0.96
MRPL28-201ENST00000199706 TGFBRAP1Q8WUH2 860 aa21.06■□□□□ 0.96
MRPL28-201ENST00000199706 OPTNQ96CV9 577 aa21.06■□□□□ 0.96
MRPL28-201ENST00000199706 BCL11AQ9H165 835 aa21.06■□□□□ 0.96
MRPL28-201ENST00000199706 ELP3Q9H9T3 547 aa21.06■□□□□ 0.96
MRPL28-201ENST00000199706 ALDH1A1P00352 501 aa21.05■□□□□ 0.96
MRPL28-201ENST00000199706 ZFYP08048 801 aaPredicted RBP21.05■□□□□ 0.96
MRPL28-201ENST00000199706 PPATQ06203 517 aa21.05■□□□□ 0.96
MRPL28-201ENST00000199706 PPIL2Q13356 520 aa21.05■□□□□ 0.96
MRPL28-201ENST00000199706 LRRFIP1Q32MZ4 808 aaKnown RBP21.05■□□□□ 0.96
MRPL28-201ENST00000199706 CTNND1O60716 968 aaKnown RBP21.04■□□□□ 0.96
MRPL28-201ENST00000199706 IGHDP01880 384 aa21.04■□□□□ 0.96
MRPL28-201ENST00000199706 GJA5P36382 358 aa21.04■□□□□ 0.96
MRPL28-201ENST00000199706 DYNLL1P63167 89 aaKnown RBP21.04■□□□□ 0.96
MRPL28-201ENST00000199706 NUCB1Q02818 461 aa21.04■□□□□ 0.96
MRPL28-201ENST00000199706 NOM1Q5C9Z4 860 aaKnown RBP21.04■□□□□ 0.96
MRPL28-201ENST00000199706 OTUD7AQ8TE49 926 aaPredicted RBP21.04■□□□□ 0.96
MRPL28-201ENST00000199706 ZKSCAN4Q969J2 545 aaPredicted RBP21.04■□□□□ 0.96
MRPL28-201ENST00000199706 CRNKL1Q9BZJ0 848 aaKnown RBP21.04■□□□□ 0.96
MRPL28-201ENST00000199706 INPP5BP32019 993 aa21.03■□□□□ 0.96
MRPL28-201ENST00000199706 GTF2A2P52657 109 aa21.03■□□□□ 0.96
MRPL28-201ENST00000199706 FOXP4Q8IVH2 680 aaPredicted RBP21.03■□□□□ 0.96
MRPL28-201ENST00000199706 MAPKAPK5Q8IW41 473 aa21.03■□□□□ 0.96
MRPL28-201ENST00000199706 SCYL3Q8IZE3 742 aa21.03■□□□□ 0.96
MRPL28-201ENST00000199706 EHD4Q9H223 541 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms