RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Snrpa1P57784 255 aaKnown RBP21.52■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Jmjd4Q8BFT6 427 aa21.52■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Etf1Q8BWY3 437 aaKnown RBP21.52■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Q8K2W9 541 aa21.52■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Gm5624F6ZZG8 207 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 CrcpO35427 148 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Cd3dP04235 173 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Pram1Q6BCL1 675 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Glis3Q6XP49 780 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Asnsd1Q8BFS9 627 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Smim5Q8BT42 78 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Tubgcp2Q921G8 905 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Krt24A1L317 512 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Cyp7b1Q60991 507 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Olfr119Q7TRJ5 321 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Clec16aQ80U30 1036 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Ube3cQ80U95 1083 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Tspyl4Q8VD63 406 aa21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Ktn1Q61595 1327 aaKnown RBP21.51■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Gm10134F6ZQC6 126 aa21.5■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Dnajc2P54103 621 aaKnown RBP21.5■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 WtapQ9ER69 396 aa21.5■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Znfx1Q8R151 1909 aaKnown RBP21.5■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Prr5lA2AVJ5 370 aa21.5■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Ctdspl2Q8BG15 465 aa21.5■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Ufl1Q8CCJ3 793 aaKnown RBP21.5■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Myo1aO88329 1043 aa21.49■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Slc4a4O88343 1079 aa21.49■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Ccdc39Q9D5Y1 937 aa21.49■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Abcb6Q9DC29 842 aa21.49■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Gnat2P50149 354 aa21.48■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Krt39Q6IFX4 482 aa21.48■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Klhl30Q8C3F7 581 aa21.48■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Pold4Q9CWP8 107 aa21.48■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Etnk1Q9D4V0 363 aa21.48■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Rapgef4Q9EQZ6 1011 aa21.48■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Myh7bA2AQP0 1941 aa21.48■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 H2afxP27661 143 aaKnown RBP21.48■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 SsbP32067 415 aaKnown RBP21.48■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Tbx2Q60707 711 aa21.48■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Brd3Q8K2F0 726 aaKnown RBP21.48■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Stk39Q9Z1W9 556 aa21.48■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Acad12D3Z7X0 555 aa21.47■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Diaph1O08808 1255 aa21.47■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Q3TYL0 343 aa21.47■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Susd4Q8BH32 490 aa21.47■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Chrna2Q91X60 512 aa21.47■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Gnl2Q99LH1 728 aaKnown RBP21.47■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Polr2dQ9D7M8 142 aaKnown RBP21.47■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Hic2Q9JLZ6 619 aaKnown RBP21.47■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Tbc1d8bA3KGB4 1114 aa21.47■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Terb1Q8C0V1 768 aa21.47■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Marf1Q8BJ34 1730 aaKnown RBP21.47■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Ift122Q6NWV3 1182 aa21.46■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Olfm5Q8BU90 496 aa21.46■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Ulbp1Q8HWA3 334 aa21.46■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Pla2g4bP0C871 782 aa21.46■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Sik1Q60670 779 aa21.46■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Arl8aQ8VEH3 186 aa21.46■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Krt23Q99PS0 422 aa21.46■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Cbx6Q9DBY5 414 aa21.46■■□□□ 1.03
Shkbp1-201ENSMUST00000003857 Zbtb7aO88939 569 aaKnown RBP21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Specc1lQ2KN98 1118 aaKnown RBP21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Dpf2Q61103 391 aaKnown RBP21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Enox1Q8BHR2 643 aaKnown RBP21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Larp6Q8BN59 492 aa21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Baiap2l1Q9DBJ3 514 aa21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Ces1hD3Z298 562 aa21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Pde11aP0C1Q2 933 aa21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Tdo2P48776 406 aa21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Spag5Q7TME2 1165 aa21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Ankk1Q8BZ25 745 aa21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Tomm22Q9CPQ3 142 aa21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 ChmQ9QXG2 665 aa21.45■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Dennd3A2RT67 1274 aa21.44■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Ric8aQ3TIR3 530 aa21.44■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Slc27a1Q60714 646 aa21.44■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Esco1Q69Z69 843 aa21.44■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Slfnl1Q8BHW9 410 aa21.44■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Nek1P51954 1203 aa21.44■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Fam89aQ14BJ1 175 aa21.44■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Usp49Q6P9L4 685 aa21.44■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Tbc1d5Q80XQ2 815 aa21.44■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Ppp2r2cQ8BG02 447 aa21.44■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Rnf41Q8BH75 317 aa21.44■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 EmbP21995 330 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 GabrdP22933 449 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Ccdc102aQ3TMW1 549 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 VeztQ3ZK22 780 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Smc2Q8CG48 1191 aaKnown RBP21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Vps18Q8R307 973 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Dnajc14Q921R4 703 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Trim34aQ99PP6 485 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Ugt1a6bK9J7B2 531 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Sec23aQ01405 765 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Pex1Q5BL07 1284 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Ugt1a6Q64435 531 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Ugt1a7cQ6ZQM8 531 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Csrnp2Q8BGQ2 534 aa21.43■■□□□ 1.02
Shkbp1-201ENSMUST00000003857 Fam53cQ8BXQ8 393 aa21.43■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms