RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 PLCD3Q8N3E9 789 aa3.43□□□□□ -1.86
NEB-209ENST00000427231 LAS1LQ9Y4W2 734 aaKnown RBP3.43□□□□□ -1.86
NEB-209ENST00000427231 NCLP19338 710 aaKnown RBP3.42□□□□□ -1.86
NEB-209ENST00000427231 NPM1P06748 294 aaKnown RBP eCLIP3.42□□□□□ -1.86
NEB-209ENST00000427231 HSP90AA1P07900 732 aaKnown RBP3.42□□□□□ -1.86
NEB-209ENST00000427231 HSP90AA2PQ14568 343 aaPredicted RBP3.42□□□□□ -1.86
NEB-209ENST00000427231 DCAF1Q9Y4B6 1507 aa3.42□□□□□ -1.86
NEB-209ENST00000427231 ZBTB7CA1YPR0 619 aa3.42□□□□□ -1.86
NEB-209ENST00000427231 WWC1Q8IX03 1113 aa3.41□□□□□ -1.86
NEB-209ENST00000427231 PNNQ9H307 717 aaKnown RBP3.41□□□□□ -1.86
NEB-209ENST00000427231 ANP32BQ92688 251 aaKnown RBP3.41□□□□□ -1.86
NEB-209ENST00000427231 CHMP4CQ96CF2 233 aa3.41□□□□□ -1.86
NEB-209ENST00000427231 HDGFP51858 240 aaKnown RBP3.4□□□□□ -1.86
NEB-209ENST00000427231 NCBP3Q53F19 620 aaKnown RBP3.4□□□□□ -1.86
NEB-209ENST00000427231 AAMPQ13685 434 aa3.4□□□□□ -1.86
NEB-209ENST00000427231 TRHP20396 242 aaPredicted RBP3.4□□□□□ -1.87
NEB-209ENST00000427231 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.4□□□□□ -1.87
NEB-209ENST00000427231 TNNT2P45379 298 aaPredicted RBP3.4□□□□□ -1.87
NEB-209ENST00000427231 TULP1O00294 542 aaPredicted RBP3.4□□□□□ -1.87
NEB-209ENST00000427231 PTMSP20962 102 aa3.4□□□□□ -1.87
NEB-209ENST00000427231 HNRNPUL2Q1KMD3 747 aaKnown RBP3.4□□□□□ -1.87
NEB-209ENST00000427231 APPP05067 770 aa3.4□□□□□ -1.87
NEB-209ENST00000427231 C14orf37Q86TY3 774 aa3.39□□□□□ -1.87
NEB-209ENST00000427231 FBLN2P98095 1184 aa3.39□□□□□ -1.87
NEB-209ENST00000427231 HDAC5Q9UQL6 1122 aa3.39□□□□□ -1.87
NEB-209ENST00000427231 HMGB1P09429 215 aaKnown RBP3.39□□□□□ -1.87
NEB-209ENST00000427231 UBTFP17480 764 aaKnown RBP3.39□□□□□ -1.87
NEB-209ENST00000427231 MS4A1P11836 297 aa3.39□□□□□ -1.87
NEB-209ENST00000427231 ZNF326Q5BKZ1 582 aaKnown RBP3.39□□□□□ -1.87
NEB-209ENST00000427231 EEA1Q15075 1411 aa3.39□□□□□ -1.87
NEB-209ENST00000427231 SUPT16HQ9Y5B9 1047 aaKnown RBP3.38□□□□□ -1.87
NEB-209ENST00000427231 CDK11BP21127 795 aaKnown RBP3.38□□□□□ -1.87
NEB-209ENST00000427231 PATL2C9JE40 543 aaKnown RBP3.38□□□□□ -1.87
NEB-209ENST00000427231 ANP32AP39687 249 aaKnown RBP3.38□□□□□ -1.87
NEB-209ENST00000427231 UPF2Q9HAU5 1272 aaKnown RBP3.38□□□□□ -1.87
NEB-209ENST00000427231 SENP3-EIF4A1A0A087X0R7 540 aa3.38□□□□□ -1.87
NEB-209ENST00000427231 E9PSI1 815 aa3.38□□□□□ -1.87
NEB-209ENST00000427231 BBXQ8WY36 941 aaPredicted RBP3.37□□□□□ -1.87
NEB-209ENST00000427231 C11orf95C9JLR9 678 aaPredicted RBP3.37□□□□□ -1.87
NEB-209ENST00000427231 ANP32CO43423 234 aa3.36□□□□□ -1.87
NEB-209ENST00000427231 DNTTIP2Q5QJE6 756 aaKnown RBP3.36□□□□□ -1.87
NEB-209ENST00000427231 EIF3DO15371 548 aaKnown RBP eCLIP3.36□□□□□ -1.87
NEB-209ENST00000427231 FGD1P98174 961 aa3.36□□□□□ -1.87
NEB-209ENST00000427231 BRPF3Q9ULD4 1205 aa3.35□□□□□ -1.87
NEB-209ENST00000427231 RGS3P49796 1198 aa3.35□□□□□ -1.87
NEB-209ENST00000427231 NAP1L2Q9ULW6 460 aaPredicted RBP3.34□□□□□ -1.87
NEB-209ENST00000427231 CANXP27824 592 aaKnown RBP3.34□□□□□ -1.87
NEB-209ENST00000427231 TNNT3P45378 269 aaPredicted RBP3.34□□□□□ -1.87
NEB-209ENST00000427231 TRIM52Q96A61 297 aa3.34□□□□□ -1.88
NEB-209ENST00000427231 GZF1Q9H116 711 aaPredicted RBP3.34□□□□□ -1.88
NEB-209ENST00000427231 RSPH6AQ9H0K4 717 aa3.34□□□□□ -1.88
NEB-209ENST00000427231 ESF1Q9H501 851 aaKnown RBP3.33□□□□□ -1.88
NEB-209ENST00000427231 HIRIP3Q9BW71 556 aaPredicted RBP3.33□□□□□ -1.88
NEB-209ENST00000427231 DHX8Q14562 1220 aaKnown RBP3.33□□□□□ -1.88
NEB-209ENST00000427231 TRIM44Q96DX7 344 aaPredicted RBP3.33□□□□□ -1.88
NEB-209ENST00000427231 BAZ1BQ9UIG0 1483 aaKnown RBP3.33□□□□□ -1.88
NEB-209ENST00000427231 TAF7LQ5H9L4 462 aa3.33□□□□□ -1.88
NEB-209ENST00000427231 TPRNQ4KMQ1 711 aa3.33□□□□□ -1.88
NEB-209ENST00000427231 NOP58Q9Y2X3 529 aaKnown RBP3.33□□□□□ -1.88
NEB-209ENST00000427231 MYO15BQ96JP2 1530 aa3.32□□□□□ -1.88
NEB-209ENST00000427231 HMGB1P1B2RPK0 211 aaPredicted RBP3.32□□□□□ -1.88
NEB-209ENST00000427231 MSH5O43196 834 aa3.32□□□□□ -1.88
NEB-209ENST00000427231 DDRGK1Q96HY6 314 aa3.32□□□□□ -1.88
NEB-209ENST00000427231 TSPY4P0CV99 314 aa3.32□□□□□ -1.88
NEB-209ENST00000427231 TSPY10P0CW01 314 aa3.32□□□□□ -1.88
NEB-209ENST00000427231 CHIC1Q5VXU3 224 aa3.31□□□□□ -1.88
NEB-209ENST00000427231 L1TD1Q5T7N2 865 aaKnown RBP3.31□□□□□ -1.88
NEB-209ENST00000427231 HOXA7P31268 230 aaPredicted RBP3.31□□□□□ -1.88
NEB-209ENST00000427231 VGLL3A8MV65 326 aa3.31□□□□□ -1.88
NEB-209ENST00000427231 NRDCO43847 1150 aa3.31□□□□□ -1.88
NEB-209ENST00000427231 SPRYD3Q8NCJ5 442 aa3.31□□□□□ -1.88
NEB-209ENST00000427231 CERS3Q8IU89 383 aa3.31□□□□□ -1.88
NEB-209ENST00000427231 CCDC34Q96HJ3 373 aa3.31□□□□□ -1.88
NEB-209ENST00000427231 ISY1Q9ULR0 285 aaKnown RBP3.31□□□□□ -1.88
NEB-209ENST00000427231 WASHC2AQ641Q2 1341 aa3.3□□□□□ -1.88
NEB-209ENST00000427231 WASHC2CQ9Y4E1 1318 aa3.3□□□□□ -1.88
NEB-209ENST00000427231 AEBP1Q8IUX7 1158 aa3.3□□□□□ -1.88
NEB-209ENST00000427231 PDE3BQ13370 1112 aa3.3□□□□□ -1.88
NEB-209ENST00000427231 SLC4A3P48751 1232 aa3.3□□□□□ -1.88
NEB-209ENST00000427231 RBM25P49756 843 aaKnown RBP3.3□□□□□ -1.88
NEB-209ENST00000427231 PRDM10Q9NQV6 1147 aa3.3□□□□□ -1.88
NEB-209ENST00000427231 FAM13BQ9NYF5 915 aa3.29□□□□□ -1.88
NEB-209ENST00000427231 ZHX1Q9UKY1 873 aaPredicted RBP3.29□□□□□ -1.88
NEB-209ENST00000427231 GOLGA6L22H0YM25 854 aa3.29□□□□□ -1.88
NEB-209ENST00000427231 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.29□□□□□ -1.88
NEB-209ENST00000427231 EIF4G2P78344 907 aaKnown RBP eCLIP3.29□□□□□ -1.88
NEB-209ENST00000427231 ZFP91Q96JP5 570 aaPredicted RBP3.29□□□□□ -1.88
NEB-209ENST00000427231 CCDC180Q9P1Z9 1646 aa3.29□□□□□ -1.88
NEB-209ENST00000427231 RSF1Q96T23 1441 aaPredicted RBP3.29□□□□□ -1.88
NEB-209ENST00000427231 DDX10Q13206 875 aaKnown RBP3.29□□□□□ -1.88
NEB-209ENST00000427231 CALD1Q05682 793 aaKnown RBP3.28□□□□□ -1.88
NEB-209ENST00000427231 AKNAQ7Z591 1439 aa3.28□□□□□ -1.88
NEB-209ENST00000427231 BECN1Q14457 450 aa3.28□□□□□ -1.88
NEB-209ENST00000427231 B4GALNT3Q6L9W6 998 aa3.28□□□□□ -1.88
NEB-209ENST00000427231 PAK3O75914 559 aaPredicted RBP3.27□□□□□ -1.89
NEB-209ENST00000427231 MTERF4Q7Z6M4 381 aaKnown RBP3.27□□□□□ -1.89
NEB-209ENST00000427231 CCER2I3L3R5 266 aa3.27□□□□□ -1.89
NEB-209ENST00000427231 CHMP7Q8WUX9 453 aaPredicted RBP3.27□□□□□ -1.89
NEB-209ENST00000427231 CNPY4Q8N129 248 aa3.27□□□□□ -1.89
NEB-209ENST00000427231 KCNH8Q96L42 1107 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms