RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 C20orf197Q8N268 126 aa12.93□□□□□ -0.34
CACNA1A-253ENST00000637927 FXYD2P54710 66 aa12.91□□□□□ -0.34
CACNA1A-253ENST00000637927 TAX1BP3O14907 124 aa12.91□□□□□ -0.34
CACNA1A-253ENST00000637927 MAP6D1Q9H9H5 199 aa12.91□□□□□ -0.34
CACNA1A-253ENST00000637927 IGLV11-55A0A075B6I3 123 aa12.91□□□□□ -0.34
CACNA1A-253ENST00000637927 PLXNB3Q9ULL4 1909 aa12.91□□□□□ -0.34
CACNA1A-253ENST00000637927 ATOX1O00244 68 aa12.91□□□□□ -0.34
CACNA1A-253ENST00000637927 MED12LQ86YW9 2145 aa12.91□□□□□ -0.34
CACNA1A-253ENST00000637927 SMR3AQ99954 134 aa12.9□□□□□ -0.34
CACNA1A-253ENST00000637927 LY6LH3BQJ8 138 aa12.9□□□□□ -0.34
CACNA1A-253ENST00000637927 Q8N7P7 452 aa12.9□□□□□ -0.34
CACNA1A-253ENST00000637927 ZNF747Q9BV97 191 aa12.9□□□□□ -0.35
CACNA1A-253ENST00000637927 G3V4G9 280 aa12.89□□□□□ -0.35
CACNA1A-253ENST00000637927 C19orf84I3L1E1 186 aa12.89□□□□□ -0.35
CACNA1A-253ENST00000637927 C14orf177Q52M58 125 aa12.89□□□□□ -0.35
CACNA1A-253ENST00000637927 H0YGX0 51 aa12.89□□□□□ -0.35
CACNA1A-253ENST00000637927 TDRG1Q3Y452 100 aa12.89□□□□□ -0.35
CACNA1A-253ENST00000637927 C20orf144Q9BQM9 153 aa12.89□□□□□ -0.35
CACNA1A-253ENST00000637927 NCOR1P1Q9H4R4 102 aa12.89□□□□□ -0.35
CACNA1A-253ENST00000637927 TMEM131Q92545 1883 aa12.89□□□□□ -0.35
CACNA1A-253ENST00000637927 PLAC8L1A1L4L8 177 aa12.89□□□□□ -0.35
CACNA1A-253ENST00000637927 MED14OSP0DP75 135 aa12.89□□□□□ -0.35
CACNA1A-253ENST00000637927 COL4A3Q01955 1670 aa12.88□□□□□ -0.35
CACNA1A-253ENST00000637927 A6NDX4 124 aa12.88□□□□□ -0.35
CACNA1A-253ENST00000637927 IL17DQ8TAD2 202 aa12.88□□□□□ -0.35
CACNA1A-253ENST00000637927 TRBV6-1A0A0K0K1D8 114 aa12.88□□□□□ -0.35
CACNA1A-253ENST00000637927 LINC01548A6NM66 108 aa12.88□□□□□ -0.35
CACNA1A-253ENST00000637927 A0A1W2PNU3 283 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-253ENST00000637927 PATE2Q6UY27 113 aa12.88□□□□□ -0.35
CACNA1A-253ENST00000637927 LOC100131303A0A0U1RQF7 123 aa12.87□□□□□ -0.35
CACNA1A-253ENST00000637927 PRO0255Q9UI72 69 aa12.87□□□□□ -0.35
CACNA1A-253ENST00000637927 TRBV10-1A0A0K0K1A3 114 aa12.87□□□□□ -0.35
CACNA1A-253ENST00000637927 C10orf99Q6UWK7 81 aa12.87□□□□□ -0.35
CACNA1A-253ENST00000637927 CLUHP3Q96NS8 147 aa12.87□□□□□ -0.35
CACNA1A-253ENST00000637927 NUPR1O60356 82 aa12.87□□□□□ -0.35
CACNA1A-253ENST00000637927 DEFB116Q30KQ4 102 aa12.86□□□□□ -0.35
CACNA1A-253ENST00000637927 J3KT08 172 aa12.86□□□□□ -0.35
CACNA1A-253ENST00000637927 PCNX1Q96RV3 2341 aa12.86□□□□□ -0.35
CACNA1A-253ENST00000637927 LY6G6DO95868 133 aa12.86□□□□□ -0.35
CACNA1A-253ENST00000637927 LINC00467Q9BRT7 94 aa12.86□□□□□ -0.35
CACNA1A-253ENST00000637927 C11orf86A6NJI1 115 aa12.85□□□□□ -0.35
CACNA1A-253ENST00000637927 A8MZ25 164 aa12.85□□□□□ -0.35
CACNA1A-253ENST00000637927 MYCNOSP40205 109 aa12.85□□□□□ -0.35
CACNA1A-253ENST00000637927 C18orf65Q6ZTR6 163 aa12.85□□□□□ -0.35
CACNA1A-253ENST00000637927 ZFAND2AQ8N6M9 145 aa12.85□□□□□ -0.35
CACNA1A-253ENST00000637927 KIAA1549Q9HCM3 1950 aa12.85□□□□□ -0.35
CACNA1A-253ENST00000637927 IGLV3-1P01715 115 aa12.85□□□□□ -0.35
CACNA1A-253ENST00000637927 Q8N976 141 aa12.84□□□□□ -0.35
CACNA1A-253ENST00000637927 CELA1Q9UNI1 258 aa12.83□□□□□ -0.36
CACNA1A-253ENST00000637927 KIAA1549LQ6ZVL6 1849 aa12.83□□□□□ -0.36
CACNA1A-253ENST00000637927 BBC3Q96PG8 261 aaPredicted RBP12.83□□□□□ -0.36
CACNA1A-253ENST00000637927 NUPR2A6NF83 97 aa12.82□□□□□ -0.36
CACNA1A-253ENST00000637927 ESRGQ1W209 222 aa12.82□□□□□ -0.36
CACNA1A-253ENST00000637927 CCKP06307 115 aa12.82□□□□□ -0.36
CACNA1A-253ENST00000637927 TIMM17BO60830 172 aa12.81□□□□□ -0.36
CACNA1A-253ENST00000637927 OXLD1Q5BKU9 147 aa12.81□□□□□ -0.36
CACNA1A-253ENST00000637927 TOMM6Q96B49 74 aa12.81□□□□□ -0.36
CACNA1A-253ENST00000637927 KIR2DL5BA0A0G2JN68 375 aa12.81□□□□□ -0.36
CACNA1A-253ENST00000637927 KIR2DL5BA0A0G2JPC4 375 aa12.81□□□□□ -0.36
CACNA1A-253ENST00000637927 KIR2DL5AQ8N109 375 aa12.81□□□□□ -0.36
CACNA1A-253ENST00000637927 SIVA1O15304 175 aa12.81□□□□□ -0.36
CACNA1A-253ENST00000637927 CACNA1HO95180 2353 aa12.8□□□□□ -0.36
CACNA1A-253ENST00000637927 FRMD6-AS1P0C7T7 363 aa12.8□□□□□ -0.36
CACNA1A-253ENST00000637927 JMJD7-PLA2G4BH0Y9G9 81 aa12.79□□□□□ -0.36
CACNA1A-253ENST00000637927 IGHV6-1A0A0B4J1U7 121 aa12.79□□□□□ -0.36
CACNA1A-253ENST00000637927 TCL1BO95988 128 aa12.79□□□□□ -0.36
CACNA1A-253ENST00000637927 ODF3L1Q8IXM7 274 aa12.79□□□□□ -0.36
CACNA1A-253ENST00000637927 PCOTHQ58A44 107 aa12.79□□□□□ -0.36
CACNA1A-253ENST00000637927 NDUFA11Q86Y39 141 aa12.79□□□□□ -0.36
CACNA1A-253ENST00000637927 FREM1Q5H8C1 2179 aa12.79□□□□□ -0.36
CACNA1A-253ENST00000637927 IGFL2Q6UWQ7 119 aa12.78□□□□□ -0.36
CACNA1A-253ENST00000637927 GDF5OSQ5U4N7 250 aa12.77□□□□□ -0.37
CACNA1A-253ENST00000637927 GPR179Q6PRD1 2367 aa12.77□□□□□ -0.37
CACNA1A-253ENST00000637927 MED13LQ71F56 2210 aa12.77□□□□□ -0.37
CACNA1A-253ENST00000637927 TP73-AS1Q9UF72 201 aa12.76□□□□□ -0.37
CACNA1A-253ENST00000637927 IGLC6P0CF74 106 aa12.76□□□□□ -0.37
CACNA1A-253ENST00000637927 BRI3O95415 125 aa12.76□□□□□ -0.37
CACNA1A-253ENST00000637927 MSMPQ1L6U9 139 aa12.76□□□□□ -0.37
CACNA1A-253ENST00000637927 Q8NA96 180 aa12.76□□□□□ -0.37
CACNA1A-253ENST00000637927 IGLV5-52A0A0A0MRZ9 124 aa12.75□□□□□ -0.37
CACNA1A-253ENST00000637927 CRIP2P52943 208 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-253ENST00000637927 CXCL5P42830 114 aa12.75□□□□□ -0.37
CACNA1A-253ENST00000637927 Q8N9L7 120 aa12.75□□□□□ -0.37
CACNA1A-253ENST00000637927 TRBV27A0A0K0K1C4 114 aa12.75□□□□□ -0.37
CACNA1A-253ENST00000637927 C10orf91Q5T1B1 145 aa12.75□□□□□ -0.37
CACNA1A-253ENST00000637927 INSL3P51460 131 aa12.74□□□□□ -0.37
CACNA1A-253ENST00000637927 UFSP1Q6NVU6 142 aa12.74□□□□□ -0.37
CACNA1A-253ENST00000637927 SHANK1Q9Y566 2161 aa12.74□□□□□ -0.37
CACNA1A-253ENST00000637927 LENEPQ9Y5L5 61 aa12.74□□□□□ -0.37
CACNA1A-253ENST00000637927 PRLHP81277 87 aa12.73□□□□□ -0.37
CACNA1A-253ENST00000637927 ODF1Q14990 250 aa12.73□□□□□ -0.37
CACNA1A-253ENST00000637927 C20orf173Q96LM9 149 aa12.73□□□□□ -0.37
CACNA1A-253ENST00000637927 NUP210LQ5VU65 1888 aa12.73□□□□□ -0.37
CACNA1A-253ENST00000637927 EXPH5Q8NEV8 1989 aa12.73□□□□□ -0.37
CACNA1A-253ENST00000637927 TMEM223A0PJW6 202 aa12.73□□□□□ -0.37
CACNA1A-253ENST00000637927 FAM167A-AS1Q96KT0 104 aa12.73□□□□□ -0.37
CACNA1A-253ENST00000637927 BEAN1Q3B7T3 259 aa12.72□□□□□ -0.37
CACNA1A-253ENST00000637927 MIFP14174 115 aa12.72□□□□□ -0.37
CACNA1A-253ENST00000637927 KPRPQ5T749 579 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-253ENST00000637927 KRTAP27-1Q3LI81 207 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms