RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	CSPG4	Q6UVK1	2322 aa		12.51	□□□□□ -0.41
CACNA1A-238	ENST00000637276	C4orf3	Q8WVX3	66 aa		12.51	□□□□□ -0.41
CACNA1A-238	ENST00000637276	ARHGAP32	A7KAX9	2087 aa		12.51	□□□□□ -0.41
CACNA1A-238	ENST00000637276	ATOX1	O00244	68 aa		12.51	□□□□□ -0.41
CACNA1A-238	ENST00000637276	PLA2G5	P39877	138 aa		12.51	□□□□□ -0.41
CACNA1A-238	ENST00000637276	IGHV7-81	A0A0B4J1V7	117 aa		12.5	□□□□□ -0.41
CACNA1A-238	ENST00000637276	UNQ9165/PRO28630	Q6UXU0	137 aa		12.5	□□□□□ -0.41
CACNA1A-238	ENST00000637276	LTBP1	Q14766	1721 aa		12.5	□□□□□ -0.41
CACNA1A-238	ENST00000637276		A6NDX4	124 aa		12.5	□□□□□ -0.41
CACNA1A-238	ENST00000637276	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA1A-238	ENST00000637276	ZNF106	Q9H2Y7	1883 aa	Known RBP	12.49	□□□□□ -0.41
CACNA1A-238	ENST00000637276	PROK1	P58294	105 aa		12.49	□□□□□ -0.41
CACNA1A-238	ENST00000637276	C5orf56	Q8N8D9	126 aa		12.49	□□□□□ -0.41
CACNA1A-238	ENST00000637276	PLXNA4	Q9HCM2	1894 aa		12.49	□□□□□ -0.41
CACNA1A-238	ENST00000637276	IL17D	Q8TAD2	202 aa		12.49	□□□□□ -0.41
CACNA1A-238	ENST00000637276	WFDC10A	Q9H1F0	79 aa		12.49	□□□□□ -0.41
CACNA1A-238	ENST00000637276	FXYD2	P54710	66 aa		12.49	□□□□□ -0.41
CACNA1A-238	ENST00000637276		U3KQA8	63 aa		12.49	□□□□□ -0.41
CACNA1A-238	ENST00000637276	PCDH15	Q96QU1	1955 aa		12.48	□□□□□ -0.41
CACNA1A-238	ENST00000637276	LY6L	H3BQJ8	138 aa		12.48	□□□□□ -0.41
CACNA1A-238	ENST00000637276		J3KT08	172 aa		12.48	□□□□□ -0.41
CACNA1A-238	ENST00000637276	PLAC8L1	A1L4L8	177 aa		12.48	□□□□□ -0.41
CACNA1A-238	ENST00000637276	C14orf177	Q52M58	125 aa		12.48	□□□□□ -0.41
CACNA1A-238	ENST00000637276	TMEM190	Q8WZ59	177 aa		12.47	□□□□□ -0.41
CACNA1A-238	ENST00000637276	DEFB116	Q30KQ4	102 aa		12.47	□□□□□ -0.41
CACNA1A-238	ENST00000637276	RSPO1	Q2MKA7	263 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNA1A-238	ENST00000637276	MED14OS	P0DP75	135 aa		12.47	□□□□□ -0.41
CACNA1A-238	ENST00000637276	NOTCH4	Q99466	2003 aa		12.46	□□□□□ -0.41
CACNA1A-238	ENST00000637276		H0YGX0	51 aa		12.46	□□□□□ -0.41
CACNA1A-238	ENST00000637276	TIMM17B	O60830	172 aa		12.46	□□□□□ -0.41
CACNA1A-238	ENST00000637276	MAP6D1	Q9H9H5	199 aa		12.46	□□□□□ -0.42
CACNA1A-238	ENST00000637276	SMR3A	Q99954	134 aa		12.45	□□□□□ -0.42
CACNA1A-238	ENST00000637276	SIVA1	O15304	175 aa		12.45	□□□□□ -0.42
CACNA1A-238	ENST00000637276	ATG2A	Q2TAZ0	1938 aa		12.45	□□□□□ -0.42
CACNA1A-238	ENST00000637276	KIR2DL5B	A0A0G2JN68	375 aa		12.44	□□□□□ -0.42
CACNA1A-238	ENST00000637276	KIR2DL5B	A0A0G2JPC4	375 aa		12.44	□□□□□ -0.42
CACNA1A-238	ENST00000637276	KIR2DL5A	Q8N109	375 aa		12.44	□□□□□ -0.42
CACNA1A-238	ENST00000637276	CELA1	Q9UNI1	258 aa		12.44	□□□□□ -0.42
CACNA1A-238	ENST00000637276	LOC100131303	A0A0U1RQF7	123 aa		12.44	□□□□□ -0.42
CACNA1A-238	ENST00000637276	ADORA2A-AS1	P86434	159 aa		12.44	□□□□□ -0.42
CACNA1A-238	ENST00000637276	TRBV10-1	A0A0K0K1A3	114 aa		12.44	□□□□□ -0.42
CACNA1A-238	ENST00000637276	TRBV6-1	A0A0K0K1D8	114 aa		12.44	□□□□□ -0.42
CACNA1A-238	ENST00000637276	LINC00311	Q8N616	119 aa		12.44	□□□□□ -0.42
CACNA1A-238	ENST00000637276	CLUHP3	Q96NS8	147 aa		12.44	□□□□□ -0.42
CACNA1A-238	ENST00000637276	MUC6	Q6W4X9	2439 aa		12.43	□□□□□ -0.42
CACNA1A-238	ENST00000637276	IGLV1-44	P01699	117 aa		12.43	□□□□□ -0.42
CACNA1A-238	ENST00000637276	C16orf54	Q6UWD8	224 aa		12.43	□□□□□ -0.42
CACNA1A-238	ENST00000637276		A8MZ25	164 aa		12.43	□□□□□ -0.42
CACNA1A-238	ENST00000637276	ESRG	Q1W209	222 aa		12.43	□□□□□ -0.42
CACNA1A-238	ENST00000637276	C1orf147	Q96MC9	270 aa	Predicted RBP	12.43	□□□□□ -0.42
CACNA1A-238	ENST00000637276	PRO0255	Q9UI72	69 aa		12.43	□□□□□ -0.42
CACNA1A-238	ENST00000637276	LINC00467	Q9BRT7	94 aa		12.42	□□□□□ -0.42
CACNA1A-238	ENST00000637276	FRMD6-AS1	P0C7T7	363 aa		12.42	□□□□□ -0.42
CACNA1A-238	ENST00000637276	ODF1	Q14990	250 aa		12.42	□□□□□ -0.42
CACNA1A-238	ENST00000637276	C11orf86	A6NJI1	115 aa		12.42	□□□□□ -0.42
CACNA1A-238	ENST00000637276	ZFAND2A	Q8N6M9	145 aa		12.42	□□□□□ -0.42
CACNA1A-238	ENST00000637276	LINC01548	A6NM66	108 aa		12.42	□□□□□ -0.42
CACNA1A-238	ENST00000637276	SI	P14410	1827 aa		12.41	□□□□□ -0.42
CACNA1A-238	ENST00000637276	C10orf99	Q6UWK7	81 aa		12.41	□□□□□ -0.42
CACNA1A-238	ENST00000637276	ANAPC1	Q9H1A4	1944 aa		12.41	□□□□□ -0.42
CACNA1A-238	ENST00000637276		I3L2K1	104 aa		12.41	□□□□□ -0.42
CACNA1A-238	ENST00000637276	PCOTH	Q58A44	107 aa		12.41	□□□□□ -0.42
CACNA1A-238	ENST00000637276	NUPR2	A6NF83	97 aa		12.41	□□□□□ -0.42
CACNA1A-238	ENST00000637276	CCK	P06307	115 aa		12.41	□□□□□ -0.42
CACNA1A-238	ENST00000637276	IGFL3	Q6UXB1	125 aa		12.41	□□□□□ -0.42
CACNA1A-238	ENST00000637276	C18orf65	Q6ZTR6	163 aa		12.4	□□□□□ -0.42
CACNA1A-238	ENST00000637276		Q8N976	141 aa		12.4	□□□□□ -0.42
CACNA1A-238	ENST00000637276	IGHV6-1	A0A0B4J1U7	121 aa		12.4	□□□□□ -0.42
CACNA1A-238	ENST00000637276	DENND4C	Q5VZ89	1909 aa		12.4	□□□□□ -0.42
CACNA1A-238	ENST00000637276	C11orf53	Q8IXP5	236 aa		12.4	□□□□□ -0.42
CACNA1A-238	ENST00000637276	PLXNA2	O75051	1894 aa		12.4	□□□□□ -0.43
CACNA1A-238	ENST00000637276	LY6G6D	O95868	133 aa		12.4	□□□□□ -0.43
CACNA1A-238	ENST00000637276	HIVEP2	P31629	2446 aa		12.39	□□□□□ -0.43
CACNA1A-238	ENST00000637276		E7EUB6	86 aa		12.39	□□□□□ -0.43
CACNA1A-238	ENST00000637276	HCFC1	P51610	2035 aa		12.39	□□□□□ -0.43
CACNA1A-238	ENST00000637276		K7EIM0	57 aa		12.39	□□□□□ -0.43
CACNA1A-238	ENST00000637276	MYCNOS	P40205	109 aa		12.39	□□□□□ -0.43
CACNA1A-238	ENST00000637276	BBC3	Q96PG8	261 aa	Predicted RBP	12.39	□□□□□ -0.43
CACNA1A-238	ENST00000637276	CRIP2	P52943	208 aa	Predicted RBP	12.38	□□□□□ -0.43
CACNA1A-238	ENST00000637276	TOMM6	Q96B49	74 aa		12.38	□□□□□ -0.43
CACNA1A-238	ENST00000637276	JMJD7-PLA2G4B	H0Y9G9	81 aa		12.38	□□□□□ -0.43
CACNA1A-238	ENST00000637276	TCL1B	O95988	128 aa		12.38	□□□□□ -0.43
CACNA1A-238	ENST00000637276	PRLH	P81277	87 aa		12.38	□□□□□ -0.43
CACNA1A-238	ENST00000637276	OXLD1	Q5BKU9	147 aa		12.37	□□□□□ -0.43
CACNA1A-238	ENST00000637276	IGLC6	P0CF74	106 aa		12.37	□□□□□ -0.43
CACNA1A-238	ENST00000637276	PATE2	Q6UY27	113 aa		12.37	□□□□□ -0.43
CACNA1A-238	ENST00000637276	TRBV27	A0A0K0K1C4	114 aa		12.37	□□□□□ -0.43
CACNA1A-238	ENST00000637276		Q8N9L7	120 aa		12.36	□□□□□ -0.43
CACNA1A-238	ENST00000637276		H3BUA1	57 aa		12.36	□□□□□ -0.43
CACNA1A-238	ENST00000637276	INSL3	P51460	131 aa		12.36	□□□□□ -0.43
CACNA1A-238	ENST00000637276	TMEM131	Q92545	1883 aa		12.36	□□□□□ -0.43
CACNA1A-238	ENST00000637276	BEAN1	Q3B7T3	259 aa		12.36	□□□□□ -0.43
CACNA1A-238	ENST00000637276	C10orf91	Q5T1B1	145 aa		12.36	□□□□□ -0.43
CACNA1A-238	ENST00000637276	C19orf84	I3L1E1	186 aa		12.35	□□□□□ -0.43
CACNA1A-238	ENST00000637276	CXCL5	P42830	114 aa		12.35	□□□□□ -0.43
CACNA1A-238	ENST00000637276	SOSTDC1	Q6X4U4	206 aa		12.35	□□□□□ -0.43
CACNA1A-238	ENST00000637276	ODF3L1	Q8IXM7	274 aa		12.35	□□□□□ -0.43
CACNA1A-238	ENST00000637276	HIVEP3	Q5T1R4	2406 aa		12.35	□□□□□ -0.43
CACNA1A-238	ENST00000637276	RNASE8	Q8TDE3	154 aa	Known RBP	12.35	□□□□□ -0.43
CACNA1A-238	ENST00000637276	TP73-AS1	Q9UF72	201 aa		12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms