RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 A0A0J9YY99 117 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 SDHAF1A6NFY7 115 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 D6R8Y8 96 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 H7C423 109 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 I3L3M4 83 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 NUDT3O95989 172 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 BTF3P20290 206 aaKnown RBP4.65□□□□□ -1.67
UPF3B-205ENST00000636792 PMCHP20382 165 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 G0S2P27469 103 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 POLR2KP53803 58 aaKnown RBP4.65□□□□□ -1.67
UPF3B-205ENST00000636792 COTL1Q14019 142 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 LELP1Q5T871 98 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 LGALS9CQ6DKI2 356 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 NRACQ8N912 160 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 ZNRF2Q8NHG8 242 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 PRELID3AQ96N28 172 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 TMEM70Q9BUB7 260 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 SMIM2Q9BVW6 85 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 MAP1LC3AQ9H492 121 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 NXT2Q9NPJ8 142 aaKnown RBP4.65□□□□□ -1.67
UPF3B-205ENST00000636792 TRAPPC1Q9Y5R8 145 aa4.65□□□□□ -1.67
UPF3B-205ENST00000636792 TRBV25-1A0A075B6N4 114 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 TRAV26-2A0A0B4J265 109 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 GAGE12JA6NER3 117 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 COLCA2A8K830 154 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 VCYO14598 125 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 TNFRSF6BO95407 300 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 RAB5AP20339 215 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 GAGE1Q13065 139 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 GAGE4Q13068 117 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 GAGE5Q13069 117 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 IQCJQ1A5X6 159 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 GAGE13Q4V321 117 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 ANKRD39Q53RE8 183 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 Q6ZSN1 163 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 TMEM18Q96B42 140 aa4.64□□□□□ -1.67
UPF3B-205ENST00000636792 TRBV6-8A0A0A6YYG3 113 aa4.63□□□□□ -1.67
UPF3B-205ENST00000636792 TRAV8-6A0A0B4J262 113 aa4.63□□□□□ -1.67
UPF3B-205ENST00000636792 IGHV1-24A0A0C4DH33 117 aa4.63□□□□□ -1.67
UPF3B-205ENST00000636792 LOC100131303A0A0U1RQF7 123 aa4.63□□□□□ -1.67
UPF3B-205ENST00000636792 LINC01546A6NGU7 62 aa4.63□□□□□ -1.67
UPF3B-205ENST00000636792 NPYP01303 97 aa4.63□□□□□ -1.67
UPF3B-205ENST00000636792 NPSP0C0P6 89 aa4.63□□□□□ -1.67
UPF3B-205ENST00000636792 ZNF25P17030 456 aaPredicted RBP4.63□□□□□ -1.67
UPF3B-205ENST00000636792 RPS10P46783 165 aaKnown RBP4.63□□□□□ -1.67
UPF3B-205ENST00000636792 RAB5BP61020 215 aa4.63□□□□□ -1.67
UPF3B-205ENST00000636792 FABP9Q0Z7S8 132 aa4.63□□□□□ -1.67
UPF3B-205ENST00000636792 TTC32Q5I0X7 151 aa4.63□□□□□ -1.67
UPF3B-205ENST00000636792 ZFAND6Q6FIF0 208 aa4.63□□□□□ -1.67
UPF3B-205ENST00000636792 LYPD5Q6UWN5 251 aa4.63□□□□□ -1.67
UPF3B-205ENST00000636792 RPL39LQ96EH5 51 aaKnown RBP4.63□□□□□ -1.67
UPF3B-205ENST00000636792 ALKBH7Q9BT30 221 aaPredicted RBP4.63□□□□□ -1.67
UPF3B-205ENST00000636792 TGP01266 2768 aa4.62□□□□□ -1.67
UPF3B-205ENST00000636792 FCER1GP30273 86 aa4.62□□□□□ -1.67
UPF3B-205ENST00000636792 AMTP48728 403 aa4.62□□□□□ -1.67
UPF3B-205ENST00000636792 LAGE3Q14657 143 aa4.62□□□□□ -1.67
UPF3B-205ENST00000636792 ORMDL2Q53FV1 153 aa4.62□□□□□ -1.67
UPF3B-205ENST00000636792 LINC01556Q5JQF7 62 aa4.62□□□□□ -1.67
UPF3B-205ENST00000636792 UBE2DNLQ8IWF7 75 aa4.62□□□□□ -1.67
UPF3B-205ENST00000636792 C10orf126Q8N4M7 172 aa4.62□□□□□ -1.67
UPF3B-205ENST00000636792 Q8N8P6 123 aa4.62□□□□□ -1.67
UPF3B-205ENST00000636792 LINC00476Q8WZB0 136 aa4.62□□□□□ -1.67
UPF3B-205ENST00000636792 IGLV2-18A0A075B6J9 118 aa4.61□□□□□ -1.67
UPF3B-205ENST00000636792 IGHV3-38A0A0C4DH36 116 aa4.61□□□□□ -1.67
UPF3B-205ENST00000636792 A0A1B0GUV1 79 aa4.61□□□□□ -1.67
UPF3B-205ENST00000636792 DNAH10OSP0CZ25 163 aa4.61□□□□□ -1.67
UPF3B-205ENST00000636792 ESRGQ1W209 222 aa4.61□□□□□ -1.67
UPF3B-205ENST00000636792 MRPL52Q86TS9 123 aaKnown RBP4.61□□□□□ -1.67
UPF3B-205ENST00000636792 C18orf32Q8TCD1 76 aa4.61□□□□□ -1.67
UPF3B-205ENST00000636792 TMEM243Q9BU79 118 aa4.61□□□□□ -1.67
UPF3B-205ENST00000636792 TIMM21Q9BVV7 248 aa4.61□□□□□ -1.67
UPF3B-205ENST00000636792 LINC00588Q9Y4M8 146 aa4.61□□□□□ -1.67
UPF3B-205ENST00000636792 CSDC2Q9Y534 153 aaKnown RBP4.61□□□□□ -1.67
UPF3B-205ENST00000636792 TRAV9-2A0A087WT02 112 aa4.6□□□□□ -1.67
UPF3B-205ENST00000636792 SMKR1H3BMG3 65 aa4.6□□□□□ -1.67
UPF3B-205ENST00000636792 UBE2L6O14933 153 aa4.6□□□□□ -1.67
UPF3B-205ENST00000636792 SIVA1O15304 175 aa4.6□□□□□ -1.67
UPF3B-205ENST00000636792 SCO1O75880 301 aa4.6□□□□□ -1.67
UPF3B-205ENST00000636792 TSHBP01222 138 aa4.6□□□□□ -1.67
UPF3B-205ENST00000636792 TRGC2P03986 189 aa4.6□□□□□ -1.67
UPF3B-205ENST00000636792 ESDP10768 282 aa4.6□□□□□ -1.67
UPF3B-205ENST00000636792 Q0VG73 95 aa4.6□□□□□ -1.67
UPF3B-205ENST00000636792 NIT1Q86X76 327 aa4.6□□□□□ -1.67
UPF3B-205ENST00000636792 PRSS3P2Q8NHM4 247 aa4.6□□□□□ -1.67
UPF3B-205ENST00000636792 CHCHD1Q96BP2 118 aaKnown RBP4.6□□□□□ -1.67
UPF3B-205ENST00000636792 SPANXA1Q9NS26 97 aa4.6□□□□□ -1.67
UPF3B-205ENST00000636792 CSMD3Q7Z407 3707 aa4.59□□□□□ -1.67
UPF3B-205ENST00000636792 A0A087WX48 190 aa4.59□□□□□ -1.67
UPF3B-205ENST00000636792 LCE6AA0A183 80 aa4.59□□□□□ -1.67
UPF3B-205ENST00000636792 GAS8-AS1O95177 125 aa4.59□□□□□ -1.67
UPF3B-205ENST00000636792 KIAA1644Q3SXP7 199 aa4.59□□□□□ -1.67
UPF3B-205ENST00000636792 PAPPA-AS1Q5QFB9 102 aa4.59□□□□□ -1.67
UPF3B-205ENST00000636792 NTM-AS1Q6ZSK4 140 aa4.59□□□□□ -1.67
UPF3B-205ENST00000636792 FA2HQ7L5A8 372 aa4.59□□□□□ -1.67
UPF3B-205ENST00000636792 C20orf203Q8NBC4 194 aa4.59□□□□□ -1.67
UPF3B-205ENST00000636792 Q9UF83 564 aa4.59□□□□□ -1.67
UPF3B-205ENST00000636792 CYSLTR1Q9Y271 337 aa4.59□□□□□ -1.67
UPF3B-205ENST00000636792 PYGO1Q9Y3Y4 419 aa4.59□□□□□ -1.67
UPF3B-205ENST00000636792 STARD9Q9P2P6 4700 aa4.59□□□□□ -1.68
UPF3B-205ENST00000636792 DYNC2H1Q8NCM8 4307 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms