RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 LINC01548A6NM66 108 aa8.9□□□□□ -0.98
SHPRH-211ENST00000629427 NUPR1O60356 82 aa8.9□□□□□ -0.98
SHPRH-211ENST00000629427 PLA2G5P39877 138 aa8.9□□□□□ -0.98
SHPRH-211ENST00000629427 ZFAND2AQ8N6M9 145 aa8.9□□□□□ -0.98
SHPRH-211ENST00000629427 CDPF1Q6NVV7 123 aa8.9□□□□□ -0.98
SHPRH-211ENST00000629427 TDRG1Q3Y452 100 aa8.9□□□□□ -0.99
SHPRH-211ENST00000629427 SS18L2Q9UHA2 77 aa8.9□□□□□ -0.99
SHPRH-211ENST00000629427 CPAMD8Q8IZJ3 1885 aa8.89□□□□□ -0.99
SHPRH-211ENST00000629427 FAM19A1Q7Z5A9 133 aa8.89□□□□□ -0.99
SHPRH-211ENST00000629427 LRRC75A-AS1Q8N1F1 130 aa8.89□□□□□ -0.99
SHPRH-211ENST00000629427 LYRM9A8MSI8 78 aa8.89□□□□□ -0.99
SHPRH-211ENST00000629427 WFDC2Q14508 124 aa8.89□□□□□ -0.99
SHPRH-211ENST00000629427 UFSP1Q6NVU6 142 aa8.89□□□□□ -0.99
SHPRH-211ENST00000629427 TTTY13Q9BZ97 58 aa8.89□□□□□ -0.99
SHPRH-211ENST00000629427 KIR2DL5BQ8NHK3 375 aa8.89□□□□□ -0.99
SHPRH-211ENST00000629427 CCDC140Q96MF4 163 aa8.89□□□□□ -0.99
SHPRH-211ENST00000629427 IGKV1D-37A0A075B6S9 117 aa8.88□□□□□ -0.99
SHPRH-211ENST00000629427 HIST2H2BDQ6DRA6 164 aa8.88□□□□□ -0.99
SHPRH-211ENST00000629427 SMIM9A6NGZ8 99 aa8.88□□□□□ -0.99
SHPRH-211ENST00000629427 ODF1Q14990 250 aa8.88□□□□□ -0.99
SHPRH-211ENST00000629427 SRCAPQ6ZRS2 3230 aa8.88□□□□□ -0.99
SHPRH-211ENST00000629427 LMO4P61968 165 aa8.88□□□□□ -0.99
SHPRH-211ENST00000629427 Q6ZSR3 168 aa8.88□□□□□ -0.99
SHPRH-211ENST00000629427 MSMPQ1L6U9 139 aa8.88□□□□□ -0.99
SHPRH-211ENST00000629427 ZNF843Q8N446 348 aa8.88□□□□□ -0.99
SHPRH-211ENST00000629427 TEN1Q86WV5 123 aa8.88□□□□□ -0.99
SHPRH-211ENST00000629427 LINC00482Q8N8I6 264 aa8.88□□□□□ -0.99
SHPRH-211ENST00000629427 CHCHD10Q8WYQ3 142 aaPredicted RBP8.88□□□□□ -0.99
SHPRH-211ENST00000629427 DEFB114Q30KQ6 69 aa8.87□□□□□ -0.99
SHPRH-211ENST00000629427 IGLV2-18A0A075B6J9 118 aa8.87□□□□□ -0.99
SHPRH-211ENST00000629427 FOXI1Q12951 378 aa8.87□□□□□ -0.99
SHPRH-211ENST00000629427 COL4A3Q01955 1670 aa8.87□□□□□ -0.99
SHPRH-211ENST00000629427 C20orf203Q8NBC4 194 aa8.87□□□□□ -0.99
SHPRH-211ENST00000629427 M0R2N4 97 aa8.87□□□□□ -0.99
SHPRH-211ENST00000629427 CRYGBP07316 175 aa8.87□□□□□ -0.99
SHPRH-211ENST00000629427 LINC00467Q9BRT7 94 aa8.87□□□□□ -0.99
SHPRH-211ENST00000629427 BPY2O14599 106 aa8.86□□□□□ -0.99
SHPRH-211ENST00000629427 MIAQ16674 131 aa8.86□□□□□ -0.99
SHPRH-211ENST00000629427 C7orf33Q8WU49 177 aa8.86□□□□□ -0.99
SHPRH-211ENST00000629427 FAM19A5Q7Z5A7 132 aaPredicted RBP8.86□□□□□ -0.99
SHPRH-211ENST00000629427 NDUFC2O95298 119 aa8.86□□□□□ -0.99
SHPRH-211ENST00000629427 HIGD1BQ9P298 99 aa8.86□□□□□ -0.99
SHPRH-211ENST00000629427 KIR2DL5BA0A0G2JN68 375 aa8.86□□□□□ -0.99
SHPRH-211ENST00000629427 KIR2DL5BA0A0G2JPC4 375 aa8.86□□□□□ -0.99
SHPRH-211ENST00000629427 SHISA2Q6UWI4 295 aa8.86□□□□□ -0.99
SHPRH-211ENST00000629427 KIR2DL5AQ8N109 375 aa8.86□□□□□ -0.99
SHPRH-211ENST00000629427 SPRY4Q9C004 299 aa8.86□□□□□ -0.99
SHPRH-211ENST00000629427 ADAMTS20P59510 1910 aa8.86□□□□□ -0.99
SHPRH-211ENST00000629427 COL5A1P20908 1838 aaPredicted RBP8.85□□□□□ -0.99
SHPRH-211ENST00000629427 LY6G6DO95868 133 aa8.85□□□□□ -0.99
SHPRH-211ENST00000629427 UBE2D1P51668 147 aa8.85□□□□□ -0.99
SHPRH-211ENST00000629427 TRAV23DV6A0A075B6W5 121 aa8.85□□□□□ -0.99
SHPRH-211ENST00000629427 PDE6GP18545 87 aa8.84□□□□□ -0.99
SHPRH-211ENST00000629427 SMIM20Q8N5G0 67 aa8.84□□□□□ -0.99
SHPRH-211ENST00000629427 UPK3BQ9BT76 320 aa8.84□□□□□ -0.99
SHPRH-211ENST00000629427 ZNF80P51504 273 aaPredicted RBP8.84□□□□□ -0.99
SHPRH-211ENST00000629427 ODF3BA8MYP8 253 aa8.84□□□□□ -0.99
SHPRH-211ENST00000629427 SVIPQ8NHG7 77 aa8.84□□□□□ -1
SHPRH-211ENST00000629427 PLA2G2EQ9NZK7 142 aa8.84□□□□□ -1
SHPRH-211ENST00000629427 PTPRSQ13332 1948 aa8.83□□□□□ -1
SHPRH-211ENST00000629427 C20orf173Q96LM9 149 aa8.83□□□□□ -1
SHPRH-211ENST00000629427 ODF3Q96PU9 254 aa8.83□□□□□ -1
SHPRH-211ENST00000629427 MIFP14174 115 aa8.83□□□□□ -1
SHPRH-211ENST00000629427 ABCA2Q9BZC7 2435 aa8.83□□□□□ -1
SHPRH-211ENST00000629427 HIVEP3Q5T1R4 2406 aa8.83□□□□□ -1
SHPRH-211ENST00000629427 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.82□□□□□ -1
SHPRH-211ENST00000629427 LRP4O75096 1905 aa8.82□□□□□ -1
SHPRH-211ENST00000629427 LY6G6CO95867 125 aa8.82□□□□□ -1
SHPRH-211ENST00000629427 C19orf71A6NCJ1 209 aa8.82□□□□□ -1
SHPRH-211ENST00000629427 USP17L23D6RBM5 183 aa8.82□□□□□ -1
SHPRH-211ENST00000629427 H7C423 109 aa8.82□□□□□ -1
SHPRH-211ENST00000629427 IGF1P05019 195 aa8.82□□□□□ -1
SHPRH-211ENST00000629427 K7EQG2 157 aa8.82□□□□□ -1
SHPRH-211ENST00000629427 WFDC10BQ8IUB3 73 aa8.82□□□□□ -1
SHPRH-211ENST00000629427 A0A0J9YXY3 114 aa8.81□□□□□ -1
SHPRH-211ENST00000629427 HRCT1Q6UXD1 115 aa8.81□□□□□ -1
SHPRH-211ENST00000629427 H3BT86 120 aa8.81□□□□□ -1
SHPRH-211ENST00000629427 FRMD6-AS1P0C7T7 363 aa8.81□□□□□ -1
SHPRH-211ENST00000629427 UBE2D4Q9Y2X8 147 aa8.81□□□□□ -1
SHPRH-211ENST00000629427 ACACBO00763 2458 aa8.81□□□□□ -1
SHPRH-211ENST00000629427 Q6ZSV7 163 aa8.81□□□□□ -1
SHPRH-211ENST00000629427 NEXN-AS1Q8NBZ9 246 aa8.81□□□□□ -1
SHPRH-211ENST00000629427 COA6Q5JTJ3 125 aaKnown RBP8.8□□□□□ -1
SHPRH-211ENST00000629427 TRBV6-8A0A0A6YYG3 113 aa8.8□□□□□ -1
SHPRH-211ENST00000629427 XAGE1AQ9HD64 81 aa8.8□□□□□ -1
SHPRH-211ENST00000629427 ANKHD1Q8IWZ3 2542 aaKnown RBP8.8□□□□□ -1
SHPRH-211ENST00000629427 GDF5OSQ5U4N7 250 aa8.8□□□□□ -1
SHPRH-211ENST00000629427 TRAV10A0A0B4J240 114 aa8.8□□□□□ -1
SHPRH-211ENST00000629427 SLPIP03973 132 aa8.8□□□□□ -1
SHPRH-211ENST00000629427 SCXQ7RTU7 201 aa8.8□□□□□ -1
SHPRH-211ENST00000629427 CFAP126Q5VTH2 177 aa8.79□□□□□ -1
SHPRH-211ENST00000629427 DCANP1Q8TF63 244 aa8.79□□□□□ -1
SHPRH-211ENST00000629427 TCL1BO95988 128 aa8.79□□□□□ -1
SHPRH-211ENST00000629427 C10orf99Q6UWK7 81 aa8.79□□□□□ -1
SHPRH-211ENST00000629427 CUL9Q8IWT3 2517 aa8.79□□□□□ -1
SHPRH-211ENST00000629427 SPINK6Q6UWN8 80 aa8.78□□□□□ -1
SHPRH-211ENST00000629427 PTH2Q96A98 100 aa8.78□□□□□ -1
SHPRH-211ENST00000629427 CDKN2A-AS1Q9UH64 79 aa8.78□□□□□ -1
SHPRH-211ENST00000629427 A0A0J9YWU9 116 aa8.78□□□□□ -1
SHPRH-211ENST00000629427 LINC00322Q6ZN03 302 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms