RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
SPTAN1-214ENST00000628614 USP17L23D6RBM5 183 aa11.22□□□□□ -0.61
SPTAN1-214ENST00000628614 AMTP48728 403 aa11.22□□□□□ -0.61
SPTAN1-214ENST00000628614 REG3AQ06141 175 aa11.22□□□□□ -0.61
SPTAN1-214ENST00000628614 TEX261Q6UWH6 196 aa11.22□□□□□ -0.61
SPTAN1-214ENST00000628614 SRRM2Q9UQ35 2752 aaKnown RBP11.21□□□□□ -0.61
SPTAN1-214ENST00000628614 C20orf203Q8NBC4 194 aa11.21□□□□□ -0.61
SPTAN1-214ENST00000628614 BORCS7Q96B45 105 aa11.21□□□□□ -0.61
SPTAN1-214ENST00000628614 TRAV8-4A0A0B4J246 113 aa11.2□□□□□ -0.62
SPTAN1-214ENST00000628614 FOXA3P55318 350 aaPredicted RBP11.2□□□□□ -0.62
SPTAN1-214ENST00000628614 KRTAP26-1Q6PEX3 210 aa11.2□□□□□ -0.62
SPTAN1-214ENST00000628614 LINC01551Q86U37 167 aa11.2□□□□□ -0.62
SPTAN1-214ENST00000628614 MYCBP2O75592 4640 aa11.19□□□□□ -0.62
SPTAN1-214ENST00000628614 IGLV4-60A0A075B6I1 120 aa11.19□□□□□ -0.62
SPTAN1-214ENST00000628614 A0A1B0GVG6 124 aa11.19□□□□□ -0.62
SPTAN1-214ENST00000628614 ZNF727A8MUV8 499 aa11.19□□□□□ -0.62
SPTAN1-214ENST00000628614 SCXQ7RTU7 201 aa11.19□□□□□ -0.62
SPTAN1-214ENST00000628614 DEFB104AQ8WTQ1 72 aa11.19□□□□□ -0.62
SPTAN1-214ENST00000628614 RPL39LQ96EH5 51 aaKnown RBP11.19□□□□□ -0.62
SPTAN1-214ENST00000628614 IGLV10-54A0A075B6I4 117 aa11.18□□□□□ -0.62
SPTAN1-214ENST00000628614 NCR2O95944 276 aa11.18□□□□□ -0.62
SPTAN1-214ENST00000628614 PLA2G1BP04054 148 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-214ENST00000628614 PRSS1P07477 247 aa11.18□□□□□ -0.62
SPTAN1-214ENST00000628614 SRP19P09132 144 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-214ENST00000628614 LINC00528Q8N1L1 170 aa11.18□□□□□ -0.62
SPTAN1-214ENST00000628614 TSKUQ8WUA8 353 aa11.18□□□□□ -0.62
SPTAN1-214ENST00000628614 CHAC1Q9BUX1 264 aa11.18□□□□□ -0.62
SPTAN1-214ENST00000628614 GFRA4Q9GZZ7 299 aa11.18□□□□□ -0.62
SPTAN1-214ENST00000628614 OSTCQ9NRP0 149 aa11.18□□□□□ -0.62
SPTAN1-214ENST00000628614 FAM231BA6NCW3 169 aa11.17□□□□□ -0.62
SPTAN1-214ENST00000628614 DGAT2L7PQ6IED9 249 aa11.17□□□□□ -0.62
SPTAN1-214ENST00000628614 CLRN3Q8NCR9 226 aa11.17□□□□□ -0.62
SPTAN1-214ENST00000628614 A0A1B0GUT8 65 aa11.16□□□□□ -0.62
SPTAN1-214ENST00000628614 SDHAF1A6NFY7 115 aa11.16□□□□□ -0.62
SPTAN1-214ENST00000628614 HIGD1CA8MV81 97 aa11.16□□□□□ -0.62
SPTAN1-214ENST00000628614 APCSP02743 223 aa11.15□□□□□ -0.62
SPTAN1-214ENST00000628614 H7C423 109 aa11.14□□□□□ -0.63
SPTAN1-214ENST00000628614 FAM74A3Q4VXF1 159 aa11.14□□□□□ -0.63
SPTAN1-214ENST00000628614 AMMECR1LQ6DCA0 310 aa11.14□□□□□ -0.63
SPTAN1-214ENST00000628614 CIRBP-AS1Q8TBR5 109 aa11.14□□□□□ -0.63
SPTAN1-214ENST00000628614 TMEM191AQ9H0A3 160 aa11.14□□□□□ -0.63
SPTAN1-214ENST00000628614 TRBV6-5A0A0K0K1A5 114 aa11.13□□□□□ -0.63
SPTAN1-214ENST00000628614 C9orf163Q8N9P6 203 aa11.13□□□□□ -0.63
SPTAN1-214ENST00000628614 HERC1Q15751 4861 aa11.12□□□□□ -0.63
SPTAN1-214ENST00000628614 I3L3M4 83 aa11.12□□□□□ -0.63
SPTAN1-214ENST00000628614 PMCHP20382 165 aa11.12□□□□□ -0.63
SPTAN1-214ENST00000628614 TMEM241Q24JQ0 296 aa11.12□□□□□ -0.63
SPTAN1-214ENST00000628614 ISOC2Q96AB3 205 aa11.12□□□□□ -0.63
SPTAN1-214ENST00000628614 ST20Q9HBF5 79 aa11.12□□□□□ -0.63
SPTAN1-214ENST00000628614 V9GYV3 84 aa11.12□□□□□ -0.63
SPTAN1-214ENST00000628614 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.11□□□□□ -0.63
SPTAN1-214ENST00000628614 hDV102S1A0JD36 115 aa11.11□□□□□ -0.63
SPTAN1-214ENST00000628614 IGKV2-29A2NJV5 120 aaPredicted RBP11.11□□□□□ -0.63
SPTAN1-214ENST00000628614 CNBPP62633 177 aaKnown RBP11.11□□□□□ -0.63
SPTAN1-214ENST00000628614 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
SPTAN1-214ENST00000628614 MRAP2Q96G30 205 aa11.11□□□□□ -0.63
SPTAN1-214ENST00000628614 DMBT1Q9UGM3 2413 aaPredicted RBP11.11□□□□□ -0.63
SPTAN1-214ENST00000628614 FGF6P10767 208 aa11.1□□□□□ -0.63
SPTAN1-214ENST00000628614 ZNF25P17030 456 aaPredicted RBP11.1□□□□□ -0.63
SPTAN1-214ENST00000628614 RPL23P62829 140 aaKnown RBP11.1□□□□□ -0.63
SPTAN1-214ENST00000628614 RIGQ13278 110 aa11.1□□□□□ -0.63
SPTAN1-214ENST00000628614 AP5S1Q9NUS5 200 aa11.1□□□□□ -0.63
SPTAN1-214ENST00000628614 NAT8Q9UHE5 227 aa11.1□□□□□ -0.63
SPTAN1-214ENST00000628614 FLG2Q5D862 2391 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-214ENST00000628614 IGKV3OR2-268A0A0C4DH90 116 aa11.09□□□□□ -0.63
SPTAN1-214ENST00000628614 RAB4AP20338 218 aa11.09□□□□□ -0.63
SPTAN1-214ENST00000628614 PEA15Q15121 130 aa11.09□□□□□ -0.63
SPTAN1-214ENST00000628614 ADIRFQ15847 76 aa11.09□□□□□ -0.63
SPTAN1-214ENST00000628614 NUP35Q8NFH5 326 aa11.09□□□□□ -0.63
SPTAN1-214ENST00000628614 RNF185Q96GF1 192 aa11.09□□□□□ -0.63
SPTAN1-214ENST00000628614 SMDT1Q9H4I9 107 aa11.09□□□□□ -0.63
SPTAN1-214ENST00000628614 NAT8BQ9UHF3 227 aa11.09□□□□□ -0.63
SPTAN1-214ENST00000628614 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-214ENST00000628614 GAGE12HA6NDE8 117 aa11.08□□□□□ -0.64
SPTAN1-214ENST00000628614 GAS8-AS1O95177 125 aa11.08□□□□□ -0.64
SPTAN1-214ENST00000628614 CFAP161Q6P656 301 aa11.08□□□□□ -0.64
SPTAN1-214ENST00000628614 AMN1Q8IY45 258 aa11.08□□□□□ -0.64
SPTAN1-214ENST00000628614 BTF3L4Q96K17 158 aa11.08□□□□□ -0.64
SPTAN1-214ENST00000628614 TMEM242Q9NWH2 141 aa11.08□□□□□ -0.64
SPTAN1-214ENST00000628614 C9JQL5 133 aa11.07□□□□□ -0.64
SPTAN1-214ENST00000628614 TSHBP01222 138 aa11.07□□□□□ -0.64
SPTAN1-214ENST00000628614 CHCHD10Q8WYQ3 142 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-214ENST00000628614 TMEM101Q96IK0 257 aa11.07□□□□□ -0.64
SPTAN1-214ENST00000628614 TRBV27A0A0K0K1C4 114 aa11.06□□□□□ -0.64
SPTAN1-214ENST00000628614 PPP1R17O96001 155 aa11.06□□□□□ -0.64
SPTAN1-214ENST00000628614 ESDP10768 282 aa11.06□□□□□ -0.64
SPTAN1-214ENST00000628614 RPS10P46783 165 aaKnown RBP11.06□□□□□ -0.64
SPTAN1-214ENST00000628614 POLR2KP53803 58 aaKnown RBP11.06□□□□□ -0.64
SPTAN1-214ENST00000628614 SDIM1Q6ZPB5 146 aa11.05□□□□□ -0.64
SPTAN1-214ENST00000628614 C15orf56Q8N910 161 aa11.05□□□□□ -0.64
SPTAN1-214ENST00000628614 OR5A1Q8NGJ0 315 aa11.05□□□□□ -0.64
SPTAN1-214ENST00000628614 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.05□□□□□ -0.64
SPTAN1-214ENST00000628614 IGHV3-64A0A075B6Q5 118 aa11.04□□□□□ -0.64
SPTAN1-214ENST00000628614 SMIM27A0A1W2PRY6 76 aa11.04□□□□□ -0.64
SPTAN1-214ENST00000628614 C7orf77A4D0Y5 90 aa11.04□□□□□ -0.64
SPTAN1-214ENST00000628614 SRSF3P84103 164 aaKnown RBP11.04□□□□□ -0.64
SPTAN1-214ENST00000628614 SMKR1H3BMG3 65 aa11.03□□□□□ -0.64
SPTAN1-214ENST00000628614 VCYO14598 125 aa11.03□□□□□ -0.64
SPTAN1-214ENST00000628614 KRTAP10-4P60372 401 aaPredicted RBP11.03□□□□□ -0.64
SPTAN1-214ENST00000628614 MRPL52Q86TS9 123 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms