RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 COTL1Q14019 142 aa5.33□□□□□ -1.56
PTP4A1-206ENST00000627002 PET117Q6UWS5 81 aa5.33□□□□□ -1.56
PTP4A1-206ENST00000627002 C2orf66Q6UXQ4 117 aa5.33□□□□□ -1.56
PTP4A1-206ENST00000627002 LINC00173Q6ZV60 143 aa5.33□□□□□ -1.56
PTP4A1-206ENST00000627002 SPATA12Q7Z6I5 190 aa5.33□□□□□ -1.56
PTP4A1-206ENST00000627002 SBSPONQ8IVN8 264 aa5.33□□□□□ -1.56
PTP4A1-206ENST00000627002 ZNRF2Q8NHG8 242 aa5.33□□□□□ -1.56
PTP4A1-206ENST00000627002 SCGB3A1Q96QR1 104 aa5.33□□□□□ -1.56
PTP4A1-206ENST00000627002 TM2D3Q9BRN9 247 aa5.33□□□□□ -1.56
PTP4A1-206ENST00000627002 PRO0255Q9UI72 69 aa5.33□□□□□ -1.56
PTP4A1-206ENST00000627002 CELA1Q9UNI1 258 aa5.33□□□□□ -1.56
PTP4A1-206ENST00000627002 HHLA3Q9XRX5 114 aa5.33□□□□□ -1.56
PTP4A1-206ENST00000627002 MEGF8Q7Z7M0 2845 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 GAGE12JA6NER3 117 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 CRYBA4P53673 196 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 UBE2D3P61077 147 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 UBE2D2P62837 147 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 S100A12P80511 92 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 GAGE1Q13065 139 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 GAGE4Q13068 117 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 GAGE5Q13069 117 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 GAGE13Q4V321 117 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 TMEM97Q5BJF2 176 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 ERASQ7Z444 233 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 TMEM141Q96I45 108 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 ZMAT4Q9H898 229 aa5.32□□□□□ -1.56
PTP4A1-206ENST00000627002 CMYA5Q8N3K9 4069 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 H0Y8G0 127 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 PAX4O43316 350 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 NPSP0C0P6 89 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 SMAGPQ0VAQ4 97 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 LINC01545Q5VT33 79 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 LGALS9CQ6DKI2 356 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 Q6ZN92 141 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 Q8N976 141 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 C20orf203Q8NBC4 194 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 PHLDA1Q8WV24 401 aaPredicted RBP5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 TIMM17AQ99595 171 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 GTSF1LQ9H1H1 148 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 Q9UF83 564 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 NOTCH3Q9UM47 2321 aa5.31□□□□□ -1.56
PTP4A1-206ENST00000627002 IGHV3-38A0A0C4DH36 116 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 A0A0J9YWU9 116 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 LOC100131303A0A0U1RQF7 123 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 IGIPA6NJ69 53 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 F5H768 121 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 PRSS1P07477 247 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 LINC00694P0DN24 101 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 GYPEP15421 78 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 C12orf74Q32Q52 190 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 TEX43Q6ZNM6 134 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 SH2D6Q7Z4S9 175 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 MRAPQ8TCY5 172 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 DNAH3Q8TD57 4116 aa5.3□□□□□ -1.56
PTP4A1-206ENST00000627002 TRAV26-1A0A087WT03 109 aa5.29□□□□□ -1.56
PTP4A1-206ENST00000627002 TRAV12-1A0A0B4J245 112 aa5.29□□□□□ -1.56
PTP4A1-206ENST00000627002 RPL39P62891 51 aaKnown RBP5.29□□□□□ -1.56
PTP4A1-206ENST00000627002 PAPPA-AS1Q5QFB9 102 aa5.29□□□□□ -1.56
PTP4A1-206ENST00000627002 ATP6V0E2Q8NHE4 81 aa5.29□□□□□ -1.56
PTP4A1-206ENST00000627002 DEFB104AQ8WTQ1 72 aa5.29□□□□□ -1.56
PTP4A1-206ENST00000627002 CHCHD7Q9BUK0 85 aa5.29□□□□□ -1.56
PTP4A1-206ENST00000627002 VAMP8Q9BV40 100 aa5.29□□□□□ -1.56
PTP4A1-206ENST00000627002 SPANXA1Q9NS26 97 aa5.29□□□□□ -1.56
PTP4A1-206ENST00000627002 PYGO1Q9Y3Y4 419 aa5.29□□□□□ -1.56
PTP4A1-206ENST00000627002 TRBV25-1A0A075B6N4 114 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 A0A087WX48 190 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 H3BNG1 76 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 H7C423 109 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 HTN3P15516 51 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 ODF1Q14990 250 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 CDPF1Q6NVV7 123 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 C11orf45Q8TAV5 145 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 BAALCQ8WXS3 180 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 VSIG2Q96IQ7 327 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 B9D2Q9BPU9 175 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 TMEM243Q9BU79 118 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 TIMM21Q9BVV7 248 aa5.28□□□□□ -1.56
PTP4A1-206ENST00000627002 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 TRAV9-2A0A087WT02 112 aa5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 TRBV6-8A0A0A6YYG3 113 aa5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 A0A0J9YY99 117 aa5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 IGKV2-29A2NJV5 120 aaPredicted RBP5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 HSBP1L1C9JCN9 74 aa5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 UBE2L6O14933 153 aa5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 PLNP26678 52 aa5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 PMVKQ15126 192 aa5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 MRPL23Q16540 153 aaKnown RBP5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 NTM-AS1Q6ZSK4 140 aa5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 Q6ZTC4 211 aa5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 MRPL52Q86TS9 123 aaKnown RBP5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 UBE2D4Q9Y2X8 147 aa5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 ICOSQ9Y6W8 199 aa5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 PKD1L1Q8TDX9 2849 aa5.27□□□□□ -1.57
PTP4A1-206ENST00000627002 IGLV4-3A0A075B6K6 122 aa5.26□□□□□ -1.57
PTP4A1-206ENST00000627002 PRSS29PA6NIE9 313 aa5.26□□□□□ -1.57
PTP4A1-206ENST00000627002 F8VRH5 84 aa5.26□□□□□ -1.57
PTP4A1-206ENST00000627002 DPM2O94777 84 aa5.26□□□□□ -1.57
PTP4A1-206ENST00000627002 IGKCP01834 107 aa5.26□□□□□ -1.57
PTP4A1-206ENST00000627002 NHLRC4P0CG21 123 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 1372.1 ms