RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 TRBV6-5A0A0K0K1A5 114 aa8.2□□□□□ -1.1
LINC00963-217ENST00000624009 V9GYV3 84 aa8.2□□□□□ -1.1
LINC00963-217ENST00000624009 H7C423 109 aa8.19□□□□□ -1.1
LINC00963-217ENST00000624009 RPL23P62829 140 aaKnown RBP8.19□□□□□ -1.1
LINC00963-217ENST00000624009 WFDC2Q14508 124 aa8.19□□□□□ -1.1
LINC00963-217ENST00000624009 BAALCQ8WXS3 180 aa8.19□□□□□ -1.1
LINC00963-217ENST00000624009 NAT8BQ9UHF3 227 aa8.19□□□□□ -1.1
LINC00963-217ENST00000624009 PPP1R17O96001 155 aa8.18□□□□□ -1.1
LINC00963-217ENST00000624009 FUSP35637 526 aaKnown RBP eCLIP8.18□□□□□ -1.14e-7■□□□□ 10.2
LINC00963-217ENST00000624009 GAGE6Q13070 117 aa8.18□□□□□ -1.1
LINC00963-217ENST00000624009 Q6ZSA8 131 aa8.18□□□□□ -1.1
LINC00963-217ENST00000624009 LINC00269Q8N2A0 174 aa8.18□□□□□ -1.1
LINC00963-217ENST00000624009 MRAP2Q96G30 205 aa8.18□□□□□ -1.1
LINC00963-217ENST00000624009 DMBT1Q9UGM3 2413 aaPredicted RBP8.18□□□□□ -1.1
LINC00963-217ENST00000624009 TRAV26-2A0A0B4J265 109 aa8.17□□□□□ -1.1
LINC00963-217ENST00000624009 A0A1B0GW15 77 aa8.17□□□□□ -1.1
LINC00963-217ENST00000624009 SDHAF1A6NFY7 115 aa8.17□□□□□ -1.1
LINC00963-217ENST00000624009 C9JQL5 133 aa8.17□□□□□ -1.1
LINC00963-217ENST00000624009 UBE2L6O14933 153 aa8.17□□□□□ -1.1
LINC00963-217ENST00000624009 AMTP48728 403 aa8.17□□□□□ -1.1
LINC00963-217ENST00000624009 REG3AQ06141 175 aa8.17□□□□□ -1.1
LINC00963-217ENST00000624009 RIGQ13278 110 aa8.17□□□□□ -1.1
LINC00963-217ENST00000624009 C20orf203Q8NBC4 194 aa8.17□□□□□ -1.1
LINC00963-217ENST00000624009 NUP35Q8NFH5 326 aa8.17□□□□□ -1.1
LINC00963-217ENST00000624009 KRTAP17-1Q9BYP8 105 aa8.17□□□□□ -1.1
LINC00963-217ENST00000624009 KRTAP4-5Q9BYR2 181 aa8.17□□□□□ -1.1
LINC00963-217ENST00000624009 VPS13BQ7Z7G8 4022 aa8.16□□□□□ -1.1
LINC00963-217ENST00000624009 SMIM27A0A1W2PRY6 76 aa8.16□□□□□ -1.1
LINC00963-217ENST00000624009 ADIRFQ15847 76 aa8.16□□□□□ -1.1
LINC00963-217ENST00000624009 FLG2Q5D862 2391 aaPredicted RBP8.16□□□□□ -1.1
LINC00963-217ENST00000624009 TRBV27A0A0K0K1C4 114 aa8.15□□□□□ -1.1
LINC00963-217ENST00000624009 I3L3M4 83 aa8.15□□□□□ -1.1
LINC00963-217ENST00000624009 LECT2O14960 151 aa8.15□□□□□ -1.1
LINC00963-217ENST00000624009 ZNF25P17030 456 aaPredicted RBP8.15□□□□□ -1.1
LINC00963-217ENST00000624009 RAB4AP20338 218 aa8.15□□□□□ -1.1
LINC00963-217ENST00000624009 SRSF3P84103 164 aaKnown RBP8.15□□□□□ -1.1
LINC00963-217ENST00000624009 KRTAP26-1Q6PEX3 210 aa8.15□□□□□ -1.1
LINC00963-217ENST00000624009 CLRN3Q8NCR9 226 aa8.15□□□□□ -1.1
LINC00963-217ENST00000624009 RPL39LQ96EH5 51 aaKnown RBP8.15□□□□□ -1.1
LINC00963-217ENST00000624009 EPM2AB3EWF7 344 aa8.14□□□□□ -1.11
LINC00963-217ENST00000624009 APCSP02743 223 aa8.14□□□□□ -1.11
LINC00963-217ENST00000624009 POLR2KP53803 58 aaKnown RBP8.14□□□□□ -1.11
LINC00963-217ENST00000624009 DGAT2L7PQ6IED9 249 aa8.14□□□□□ -1.11
LINC00963-217ENST00000624009 RNF185Q96GF1 192 aa8.14□□□□□ -1.11
LINC00963-217ENST00000624009 ST20Q9HBF5 79 aa8.14□□□□□ -1.11
LINC00963-217ENST00000624009 IGLV4-60A0A075B6I1 120 aa8.13□□□□□ -1.11
LINC00963-217ENST00000624009 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.13□□□□□ -1.11
LINC00963-217ENST00000624009 LINC00862A6NCI5 91 aa8.13□□□□□ -1.11
LINC00963-217ENST00000624009 USP17L23D6RBM5 183 aa8.13□□□□□ -1.11
LINC00963-217ENST00000624009 S100A8P05109 93 aa8.13□□□□□ -1.11
LINC00963-217ENST00000624009 RAB14P61106 215 aa8.13□□□□□ -1.11
LINC00963-217ENST00000624009 PPP1R2P9O14990 202 aa8.12□□□□□ -1.11
LINC00963-217ENST00000624009 HLA-DQA1P01909 254 aa8.12□□□□□ -1.11
LINC00963-217ENST00000624009 PNRC1Q12796 327 aaPredicted RBP8.12□□□□□ -1.11
LINC00963-217ENST00000624009 AMN1Q8IY45 258 aa8.12□□□□□ -1.11
LINC00963-217ENST00000624009 VCYO14598 125 aa8.11□□□□□ -1.11
LINC00963-217ENST00000624009 ESDP10768 282 aa8.11□□□□□ -1.11
LINC00963-217ENST00000624009 PMCHP20382 165 aa8.11□□□□□ -1.11
LINC00963-217ENST00000624009 RPL32P62910 135 aaKnown RBP8.11□□□□□ -1.11
LINC00963-217ENST00000624009 FAM104BQ5XKR9 115 aa8.11□□□□□ -1.11
LINC00963-217ENST00000624009 AMMECR1LQ6DCA0 310 aa8.11□□□□□ -1.11
LINC00963-217ENST00000624009 MRPL52Q86TS9 123 aaKnown RBP8.11□□□□□ -1.11
LINC00963-217ENST00000624009 TRBV24-1A0A075B6N3 115 aa8.1□□□□□ -1.11
LINC00963-217ENST00000624009 TCAPO15273 167 aa8.1□□□□□ -1.11
LINC00963-217ENST00000624009 TSHBP01222 138 aa8.1□□□□□ -1.11
LINC00963-217ENST00000624009 FGF6P10767 208 aa8.1□□□□□ -1.11
LINC00963-217ENST00000624009 SUMO2P61956 95 aaKnown RBP8.1□□□□□ -1.11
LINC00963-217ENST00000624009 CNBPP62633 177 aaKnown RBP8.1□□□□□ -1.11
LINC00963-217ENST00000624009 SMAGPQ0VAQ4 97 aa8.1□□□□□ -1.11
LINC00963-217ENST00000624009 Q5VSD8 79 aa8.1□□□□□ -1.11
LINC00963-217ENST00000624009 CLPSL2Q6UWE3 100 aa8.1□□□□□ -1.11
LINC00963-217ENST00000624009 ATP5L2Q7Z4Y8 100 aa8.1□□□□□ -1.11
LINC00963-217ENST00000624009 C20orf78Q9BR46 151 aa8.1□□□□□ -1.11
LINC00963-217ENST00000624009 FAM30AQ9NZY2 134 aa8.1□□□□□ -1.11
LINC00963-217ENST00000624009 F8W036 122 aa8.09□□□□□ -1.11
LINC00963-217ENST00000624009 FAM229AH3BQW9 127 aa8.09□□□□□ -1.11
LINC00963-217ENST00000624009 PRSS1P07477 247 aa8.09□□□□□ -1.11
LINC00963-217ENST00000624009 RPS10P46783 165 aaKnown RBP8.09□□□□□ -1.11
LINC00963-217ENST00000624009 HBBP68871 147 aa8.09□□□□□ -1.11
LINC00963-217ENST00000624009 CLLU1Q5K131 121 aa8.09□□□□□ -1.11
LINC00963-217ENST00000624009 NRACQ8N912 160 aa8.09□□□□□ -1.11
LINC00963-217ENST00000624009 TMEM101Q96IK0 257 aa8.09□□□□□ -1.11
LINC00963-217ENST00000624009 BTF3L4Q96K17 158 aa8.09□□□□□ -1.11
LINC00963-217ENST00000624009 KIR2DL4Q99706 377 aa8.09□□□□□ -1.11
LINC00963-217ENST00000624009 CSDC2Q9Y534 153 aaKnown RBP8.09□□□□□ -1.11
LINC00963-217ENST00000624009 A0A1B0GXF2 115 aa8.08□□□□□ -1.12
LINC00963-217ENST00000624009 C7orf77A4D0Y5 90 aa8.08□□□□□ -1.12
LINC00963-217ENST00000624009 PHOX2AO14813 284 aa8.08□□□□□ -1.12
LINC00963-217ENST00000624009 GAS8-AS1O95177 125 aa8.08□□□□□ -1.12
LINC00963-217ENST00000624009 PPBPP02775 128 aa8.08□□□□□ -1.12
LINC00963-217ENST00000624009 RNASEKQ6P5S7 137 aaKnown RBP8.08□□□□□ -1.12
LINC00963-217ENST00000624009 CFAP161Q6P656 301 aa8.08□□□□□ -1.12
LINC00963-217ENST00000624009 C9orf163Q8N9P6 203 aa8.08□□□□□ -1.12
LINC00963-217ENST00000624009 OR5A1Q8NGJ0 315 aa8.08□□□□□ -1.12
LINC00963-217ENST00000624009 CHAC1Q9BUX1 264 aa8.08□□□□□ -1.12
LINC00963-217ENST00000624009 MYCBP2O75592 4640 aa8.08□□□□□ -1.12
LINC00963-217ENST00000624009 IGLV10-54A0A075B6I4 117 aa8.07□□□□□ -1.12
LINC00963-217ENST00000624009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.07□□□□□ -1.12
LINC00963-217ENST00000624009 IGKV2-29A2NJV5 120 aaPredicted RBP8.07□□□□□ -1.12
LINC00963-217ENST00000624009 CCL25O15444 150 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms