RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 IQCJQ1A5X6 159 aa6.93□□□□□ -1.3
LINC00963-214ENST00000622680 TMEM97Q5BJF2 176 aa6.93□□□□□ -1.3
LINC00963-214ENST00000622680 CENPWQ5EE01 88 aa6.93□□□□□ -1.3
LINC00963-214ENST00000622680 DPH3Q96FX2 82 aa6.93□□□□□ -1.3
LINC00963-214ENST00000622680 SSBP4Q9BWG4 385 aaPredicted RBP6.93□□□□□ -1.3
LINC00963-214ENST00000622680 SMIM17P0DL12 118 aa6.92□□□□□ -1.3
LINC00963-214ENST00000622680 MLST8Q9BVC4 326 aa6.92□□□□□ -1.3
LINC00963-214ENST00000622680 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
LINC00963-214ENST00000622680 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.91□□□□□ -1.3
LINC00963-214ENST00000622680 M0QY20 66 aa6.91□□□□□ -1.3
LINC00963-214ENST00000622680 GZMBP10144 247 aa6.91□□□□□ -1.3
LINC00963-214ENST00000622680 SUMO4Q6EEV6 95 aa6.91□□□□□ -1.3
LINC00963-214ENST00000622680 C15orf56Q8N910 161 aa6.91□□□□□ -1.3
LINC00963-214ENST00000622680 RNF185Q96GF1 192 aa6.91□□□□□ -1.3
LINC00963-214ENST00000622680 TPPP3Q9BW30 176 aa6.91□□□□□ -1.3
LINC00963-214ENST00000622680 C11orf52Q96A22 123 aa6.9□□□□□ -1.3
LINC00963-214ENST00000622680 TMEM243Q9BU79 118 aa6.9□□□□□ -1.3
LINC00963-214ENST00000622680 PLAC8Q9NZF1 115 aa6.9□□□□□ -1.3
LINC00963-214ENST00000622680 TRAV8-4A0A0B4J246 113 aa6.89□□□□□ -1.31
LINC00963-214ENST00000622680 IGKV2-24A0A0C4DH68 120 aa6.89□□□□□ -1.31
LINC00963-214ENST00000622680 IGKV3OR2-268A0A0C4DH90 116 aa6.89□□□□□ -1.31
LINC00963-214ENST00000622680 P01737 135 aa6.89□□□□□ -1.31
LINC00963-214ENST00000622680 PRR3P79522 188 aaKnown RBP6.89□□□□□ -1.31
LINC00963-214ENST00000622680 COX6A2Q02221 97 aa6.89□□□□□ -1.31
LINC00963-214ENST00000622680 HIGD2BQ4VC39 106 aa6.89□□□□□ -1.31
LINC00963-214ENST00000622680 C7orf33Q8WU49 177 aa6.89□□□□□ -1.31
LINC00963-214ENST00000622680 FAM210AQ96ND0 272 aa6.89□□□□□ -1.31
LINC00963-214ENST00000622680 DPH3P1Q9H4G8 78 aa6.89□□□□□ -1.31
LINC00963-214ENST00000622680 A0A1B0GUV1 79 aa6.88□□□□□ -1.31
LINC00963-214ENST00000622680 GAGE12HA6NDE8 117 aa6.88□□□□□ -1.31
LINC00963-214ENST00000622680 IGLC6P0CF74 106 aa6.88□□□□□ -1.31
LINC00963-214ENST00000622680 MAJINQ3KP22 176 aa6.88□□□□□ -1.31
LINC00963-214ENST00000622680 OR2D3Q8NGH3 330 aa6.88□□□□□ -1.31
LINC00963-214ENST00000622680 PRSS3P2Q8NHM4 247 aa6.88□□□□□ -1.31
LINC00963-214ENST00000622680 GTSF1Q8WW33 167 aa6.88□□□□□ -1.31
LINC00963-214ENST00000622680 SMIM7Q9BQ49 75 aa6.88□□□□□ -1.31
LINC00963-214ENST00000622680 LPAP08519 4548 aa6.88□□□□□ -1.31
LINC00963-214ENST00000622680 ZNF727A8MUV8 499 aa6.87□□□□□ -1.31
LINC00963-214ENST00000622680 H7C1H1 209 aa6.87□□□□□ -1.31
LINC00963-214ENST00000622680 UBE2L6O14933 153 aa6.87□□□□□ -1.31
LINC00963-214ENST00000622680 PEA15Q15121 130 aa6.87□□□□□ -1.31
LINC00963-214ENST00000622680 CLLU1Q5K131 121 aa6.87□□□□□ -1.31
LINC00963-214ENST00000622680 WDR73Q6P4I2 378 aa6.87□□□□□ -1.31
LINC00963-214ENST00000622680 RASL11AQ6T310 242 aa6.87□□□□□ -1.31
LINC00963-214ENST00000622680 FER1L6-AS1Q8NA97 138 aa6.87□□□□□ -1.31
LINC00963-214ENST00000622680 LYPD6BQ8NI32 183 aa6.87□□□□□ -1.31
LINC00963-214ENST00000622680 LINC01600Q96MT4 127 aa6.87□□□□□ -1.31
LINC00963-214ENST00000622680 BIN3Q9NQY0 253 aa6.87□□□□□ -1.31
LINC00963-214ENST00000622680 A0A096LNI7 61 aa6.86□□□□□ -1.31
LINC00963-214ENST00000622680 TMEM250H0YL14 139 aa6.86□□□□□ -1.31
LINC00963-214ENST00000622680 AMTP48728 403 aa6.86□□□□□ -1.31
LINC00963-214ENST00000622680 PGLYRP4Q96LB8 373 aa6.86□□□□□ -1.31
LINC00963-214ENST00000622680 XKRY2A2RUG3 117 aa6.85□□□□□ -1.31
LINC00963-214ENST00000622680 NDUFS6O75380 124 aaKnown RBP6.85□□□□□ -1.31
LINC00963-214ENST00000622680 SRP19P09132 144 aaKnown RBP6.85□□□□□ -1.31
LINC00963-214ENST00000622680 RPS10P46783 165 aaKnown RBP6.85□□□□□ -1.31
LINC00963-214ENST00000622680 STPG4Q8N801 248 aa6.85□□□□□ -1.31
LINC00963-214ENST00000622680 OCC1Q8TAD7 63 aa6.85□□□□□ -1.31
LINC00963-214ENST00000622680 TRBV20OR9-2A0A075B6H5 130 aa6.84□□□□□ -1.31
LINC00963-214ENST00000622680 RPS20P60866 119 aaKnown RBP6.84□□□□□ -1.31
LINC00963-214ENST00000622680 CACNG7P62955 275 aa6.84□□□□□ -1.31
LINC00963-214ENST00000622680 SRSF3P84103 164 aaKnown RBP6.84□□□□□ -1.31
LINC00963-214ENST00000622680 COTL1Q14019 142 aa6.84□□□□□ -1.31
LINC00963-214ENST00000622680 ADIRFQ15847 76 aa6.84□□□□□ -1.31
LINC00963-214ENST00000622680 CHCHD10Q8WYQ3 142 aaPredicted RBP6.84□□□□□ -1.31
LINC00963-214ENST00000622680 RNASE7Q9H1E1 156 aaKnown RBP6.84□□□□□ -1.31
LINC00963-214ENST00000622680 NIT2Q9NQR4 276 aa6.84□□□□□ -1.31
LINC00963-214ENST00000622680 TRAV26-2A0A0B4J265 109 aa6.83□□□□□ -1.32
LINC00963-214ENST00000622680 A0A0J9YXV3 536 aa6.83□□□□□ -1.32
LINC00963-214ENST00000622680 C19orf71A6NCJ1 209 aa6.83□□□□□ -1.32
LINC00963-214ENST00000622680 GATCO43716 136 aaKnown RBP6.83□□□□□ -1.32
LINC00963-214ENST00000622680 LYZL1Q6UWQ5 148 aa6.83□□□□□ -1.32
LINC00963-214ENST00000622680 NUDT10Q8NFP7 164 aa6.83□□□□□ -1.32
LINC00963-214ENST00000622680 SMIM12Q96EX1 92 aa6.83□□□□□ -1.32
LINC00963-214ENST00000622680 LINC00526Q96FQ7 95 aa6.83□□□□□ -1.32
LINC00963-214ENST00000622680 NUDT11Q96G61 164 aa6.83□□□□□ -1.32
LINC00963-214ENST00000622680 RPP21Q9H633 154 aaKnown RBP6.83□□□□□ -1.32
LINC00963-214ENST00000622680 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.82□□□□□ -1.32
LINC00963-214ENST00000622680 GVQW2A0A096LPI5 108 aaPredicted RBP6.82□□□□□ -1.32
LINC00963-214ENST00000622680 IGKV2-29A2NJV5 120 aaPredicted RBP6.82□□□□□ -1.32
LINC00963-214ENST00000622680 C9JQL5 133 aa6.82□□□□□ -1.32
LINC00963-214ENST00000622680 K7EN84 100 aa6.82□□□□□ -1.32
LINC00963-214ENST00000622680 TRGC1P0CF51 173 aa6.82□□□□□ -1.32
LINC00963-214ENST00000622680 NTF3P20783 257 aa6.82□□□□□ -1.32
LINC00963-214ENST00000622680 TMEM241Q24JQ0 296 aa6.82□□□□□ -1.32
LINC00963-214ENST00000622680 CFAP161Q6P656 301 aa6.82□□□□□ -1.32
LINC00963-214ENST00000622680 FAM74A3Q4VXF1 159 aa6.81□□□□□ -1.32
LINC00963-214ENST00000622680 AMMECR1LQ6DCA0 310 aa6.81□□□□□ -1.32
LINC00963-214ENST00000622680 RNASEKQ6P5S7 137 aaKnown RBP6.81□□□□□ -1.32
LINC00963-214ENST00000622680 COMMD7Q86VX2 200 aa6.81□□□□□ -1.32
LINC00963-214ENST00000622680 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
LINC00963-214ENST00000622680 LINC00862A6NCI5 91 aa6.8□□□□□ -1.32
LINC00963-214ENST00000622680 CTRLP40313 264 aa6.8□□□□□ -1.32
LINC00963-214ENST00000622680 KRTAP10-8P60410 259 aa6.8□□□□□ -1.32
LINC00963-214ENST00000622680 FOXI1Q12951 378 aa6.8□□□□□ -1.32
LINC00963-214ENST00000622680 TWIST1Q15672 202 aa6.8□□□□□ -1.32
LINC00963-214ENST00000622680 LINC01551Q86U37 167 aa6.8□□□□□ -1.32
LINC00963-214ENST00000622680 SLC7A5P1Q8MH63 180 aa6.8□□□□□ -1.32
LINC00963-214ENST00000622680 GATD1Q8NB37 220 aa6.8□□□□□ -1.32
LINC00963-214ENST00000622680 BORCS7Q96B45 105 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms