RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 RHOHQ15669 191 aa12.8□□□□□ -0.36
ZNF48-206ENST00000622647 LY6G6DO95868 133 aa12.8□□□□□ -0.36
ZNF48-206ENST00000622647 HILS1P60008 231 aa12.8□□□□□ -0.36
ZNF48-206ENST00000622647 RNASE8Q8TDE3 154 aaKnown RBP12.8□□□□□ -0.36
ZNF48-206ENST00000622647 VWFP04275 2813 aa12.8□□□□□ -0.36
ZNF48-206ENST00000622647 TRAV25A0A0B4J276 109 aa12.79□□□□□ -0.36
ZNF48-206ENST00000622647 KRTAP10-3P60369 221 aa12.79□□□□□ -0.36
ZNF48-206ENST00000622647 C16orf95Q9H693 158 aa12.79□□□□□ -0.36
ZNF48-206ENST00000622647 IGLV4-3A0A075B6K6 122 aa12.79□□□□□ -0.36
ZNF48-206ENST00000622647 ADARB2-AS1A8MUL3 147 aa12.79□□□□□ -0.36
ZNF48-206ENST00000622647 Q6ZTI0 123 aa12.79□□□□□ -0.36
ZNF48-206ENST00000622647 VCX2Q9H322 139 aa12.79□□□□□ -0.36
ZNF48-206ENST00000622647 ZNF479Q96JC4 524 aa12.78□□□□□ -0.36
ZNF48-206ENST00000622647 TM2D2Q9BX73 214 aa12.78□□□□□ -0.36
ZNF48-206ENST00000622647 NBEAL2Q6ZNJ1 2754 aa12.78□□□□□ -0.36
ZNF48-206ENST00000622647 SAMD5Q5TGI4 173 aa12.77□□□□□ -0.37
ZNF48-206ENST00000622647 TRBV7-3A0A075B6L6 115 aa12.76□□□□□ -0.37
ZNF48-206ENST00000622647 SRSF9Q13242 221 aaKnown RBP eCLIP12.76□□□□□ -0.37
ZNF48-206ENST00000622647 NOP10Q9NPE3 64 aaKnown RBP12.76□□□□□ -0.37
ZNF48-206ENST00000622647 A0A1W2PPM0 123 aa12.76□□□□□ -0.37
ZNF48-206ENST00000622647 HERVK_113P61574 105 aa12.76□□□□□ -0.37
ZNF48-206ENST00000622647 GIG44P09565 113 aaPredicted RBP12.75□□□□□ -0.37
ZNF48-206ENST00000622647 FAM104AQ969W3 186 aa12.75□□□□□ -0.37
ZNF48-206ENST00000622647 SPXQ9BT56 116 aa12.75□□□□□ -0.37
ZNF48-206ENST00000622647 GAGE12BA1L429 117 aa12.75□□□□□ -0.37
ZNF48-206ENST00000622647 C12orf74Q32Q52 190 aa12.75□□□□□ -0.37
ZNF48-206ENST00000622647 LINC00467Q9BRT7 94 aa12.75□□□□□ -0.37
ZNF48-206ENST00000622647 SPCS1Q9Y6A9 102 aa12.75□□□□□ -0.37
ZNF48-206ENST00000622647 RS1O15537 224 aa12.75□□□□□ -0.37
ZNF48-206ENST00000622647 TENM1Q9UKZ4 2725 aa12.74□□□□□ -0.37
ZNF48-206ENST00000622647 LINC01549A6NIU2 74 aa12.74□□□□□ -0.37
ZNF48-206ENST00000622647 INAFM1C9JVW0 142 aa12.74□□□□□ -0.37
ZNF48-206ENST00000622647 IGLV1-51P01701 117 aa12.74□□□□□ -0.37
ZNF48-206ENST00000622647 BEAN1Q3B7T3 259 aa12.74□□□□□ -0.37
ZNF48-206ENST00000622647 PAPPA-AS1Q5QFB9 102 aa12.74□□□□□ -0.37
ZNF48-206ENST00000622647 SFTA2Q6UW10 78 aa12.74□□□□□ -0.37
ZNF48-206ENST00000622647 CHCHD7Q9BUK0 85 aa12.74□□□□□ -0.37
ZNF48-206ENST00000622647 SPATA3Q8NHX4 192 aa12.73□□□□□ -0.37
ZNF48-206ENST00000622647 ZNF22P17026 224 aaPredicted RBP12.73□□□□□ -0.37
ZNF48-206ENST00000622647 J3QQQ9 107 aa12.72□□□□□ -0.37
ZNF48-206ENST00000622647 FABP2P12104 132 aa12.72□□□□□ -0.37
ZNF48-206ENST00000622647 K7EP34 96 aa12.72□□□□□ -0.37
ZNF48-206ENST00000622647 RHODO00212 210 aa12.71□□□□□ -0.37
ZNF48-206ENST00000622647 GAGE7O76087 117 aa12.71□□□□□ -0.37
ZNF48-206ENST00000622647 GAGE12FP0CL80 117 aa12.71□□□□□ -0.37
ZNF48-206ENST00000622647 GAGE12GP0CL81 117 aa12.71□□□□□ -0.37
ZNF48-206ENST00000622647 GAGE12IP0CL82 117 aa12.71□□□□□ -0.37
ZNF48-206ENST00000622647 LGALS3P17931 250 aaKnown RBP12.71□□□□□ -0.37
ZNF48-206ENST00000622647 RNF151Q2KHN1 245 aa12.71□□□□□ -0.37
ZNF48-206ENST00000622647 GTF2H5Q6ZYL4 71 aa12.71□□□□□ -0.37
ZNF48-206ENST00000622647 C19orf73Q9NVV2 129 aa12.71□□□□□ -0.37
ZNF48-206ENST00000622647 TRAV8-3A0A0A6YYJ7 113 aa12.71□□□□□ -0.38
ZNF48-206ENST00000622647 A8MZ25 164 aa12.71□□□□□ -0.38
ZNF48-206ENST00000622647 PF4P02776 101 aa12.71□□□□□ -0.38
ZNF48-206ENST00000622647 COTL1Q14019 142 aa12.71□□□□□ -0.38
ZNF48-206ENST00000622647 Q6ZUT4 128 aa12.71□□□□□ -0.38
ZNF48-206ENST00000622647 IGLL5B9A064 214 aa12.7□□□□□ -0.38
ZNF48-206ENST00000622647 HIVEP1P15822 2718 aa12.7□□□□□ -0.38
ZNF48-206ENST00000622647 A0A0J9YY99 117 aa12.7□□□□□ -0.38
ZNF48-206ENST00000622647 TMEM223A0PJW6 202 aa12.7□□□□□ -0.38
ZNF48-206ENST00000622647 GAGE12JA6NER3 117 aa12.7□□□□□ -0.38
ZNF48-206ENST00000622647 GAGE4Q13068 117 aa12.7□□□□□ -0.38
ZNF48-206ENST00000622647 GAGE5Q13069 117 aa12.7□□□□□ -0.38
ZNF48-206ENST00000622647 TAL2Q16559 108 aa12.7□□□□□ -0.38
ZNF48-206ENST00000622647 GAGE13Q4V321 117 aa12.7□□□□□ -0.38
ZNF48-206ENST00000622647 NFE4Q86UQ8 179 aa12.7□□□□□ -0.38
ZNF48-206ENST00000622647 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
ZNF48-206ENST00000622647 APOMO95445 188 aa12.69□□□□□ -0.38
ZNF48-206ENST00000622647 EDA2RQ9HAV5 297 aa12.69□□□□□ -0.38
ZNF48-206ENST00000622647 UBE2D4Q9Y2X8 147 aa12.69□□□□□ -0.38
ZNF48-206ENST00000622647 CLUHP3Q96NS8 147 aa12.69□□□□□ -0.38
ZNF48-206ENST00000622647 ATRQ13535 2644 aa12.68□□□□□ -0.38
ZNF48-206ENST00000622647 TMEM263Q8WUH6 116 aaKnown RBP12.68□□□□□ -0.38
ZNF48-206ENST00000622647 LOC100131303A0A0U1RQF7 123 aa12.68□□□□□ -0.38
ZNF48-206ENST00000622647 TRGV2A0A075B6R0 118 aa12.67□□□□□ -0.38
ZNF48-206ENST00000622647 NDUFA7O95182 113 aa12.67□□□□□ -0.38
ZNF48-206ENST00000622647 PIK3CD-AS1Q5SR53 167 aa12.67□□□□□ -0.38
ZNF48-206ENST00000622647 MTURNQ8N3F0 131 aa12.67□□□□□ -0.38
ZNF48-206ENST00000622647 SLC25A29Q8N8R3 303 aa12.67□□□□□ -0.38
ZNF48-206ENST00000622647 AMELXQ99217 191 aa12.67□□□□□ -0.38
ZNF48-206ENST00000622647 IL17DQ8TAD2 202 aa12.67□□□□□ -0.38
ZNF48-206ENST00000622647 PTH2Q96A98 100 aa12.67□□□□□ -0.38
ZNF48-206ENST00000622647 LINC00694P0DN24 101 aa12.66□□□□□ -0.38
ZNF48-206ENST00000622647 DGAT2L7PQ6IED9 249 aa12.66□□□□□ -0.38
ZNF48-206ENST00000622647 PYGO1Q9Y3Y4 419 aa12.66□□□□□ -0.38
ZNF48-206ENST00000622647 SPINK8P0C7L1 97 aa12.65□□□□□ -0.38
ZNF48-206ENST00000622647 PLAC8L1A1L4L8 177 aa12.65□□□□□ -0.39
ZNF48-206ENST00000622647 LEPROTO15243 131 aa12.65□□□□□ -0.39
ZNF48-206ENST00000622647 DNAJC30Q96LL9 226 aa12.65□□□□□ -0.39
ZNF48-206ENST00000622647 PGPEP1Q9NXJ5 209 aa12.65□□□□□ -0.39
ZNF48-206ENST00000622647 C21orf62-AS1Q17RA5 79 aa12.64□□□□□ -0.39
ZNF48-206ENST00000622647 RRN3P1Q2M238 152 aa12.64□□□□□ -0.39
ZNF48-206ENST00000622647 K7EQD1 137 aa12.64□□□□□ -0.39
ZNF48-206ENST00000622647 IGHV3-30-3P0DP02 117 aa12.64□□□□□ -0.39
ZNF48-206ENST00000622647 NTM-AS1Q6ZSK4 140 aa12.63□□□□□ -0.39
ZNF48-206ENST00000622647 CSNK1G2-AS1Q8NCQ2 148 aa12.63□□□□□ -0.39
ZNF48-206ENST00000622647 TIMM21Q9BVV7 248 aa12.63□□□□□ -0.39
ZNF48-206ENST00000622647 RPL36AP83881 106 aaKnown RBP12.63□□□□□ -0.39
ZNF48-206ENST00000622647 OCIAD2Q56VL3 154 aa12.63□□□□□ -0.39
ZNF48-206ENST00000622647 RPL36ALQ969Q0 106 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms