RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 K7EN84 100 aa15.52■□□□□ 0.08
ATXN3-253ENST00000621269 AMTP48728 403 aa15.52■□□□□ 0.08
ATXN3-253ENST00000621269 C9orf163Q8N9P6 203 aa15.52■□□□□ 0.08
ATXN3-253ENST00000621269 CNFNQ9BYD5 112 aa15.52■□□□□ 0.08
ATXN3-253ENST00000621269 IGLV4-60A0A075B6I1 120 aa15.51■□□□□ 0.07
ATXN3-253ENST00000621269 SMIM15Q7Z3B0 74 aa15.5■□□□□ 0.07
ATXN3-253ENST00000621269 BLOC1S1P78537 153 aa15.49■□□□□ 0.07
ATXN3-253ENST00000621269 AKAP14Q86UN6 197 aa15.49■□□□□ 0.07
ATXN3-253ENST00000621269 GATD1Q8NB37 220 aa15.49■□□□□ 0.07
ATXN3-253ENST00000621269 TRAV26-2A0A0B4J265 109 aa15.48■□□□□ 0.07
ATXN3-253ENST00000621269 hDV102S1A0JD36 115 aa15.48■□□□□ 0.07
ATXN3-253ENST00000621269 KRTAP10-4P60372 401 aaPredicted RBP15.48■□□□□ 0.07
ATXN3-253ENST00000621269 Q6ZNX1 250 aa15.48■□□□□ 0.07
ATXN3-253ENST00000621269 GFRA4Q9GZZ7 299 aa15.48■□□□□ 0.07
ATXN3-253ENST00000621269 TMEM250H0YL14 139 aa15.47■□□□□ 0.07
ATXN3-253ENST00000621269 ALKAL2Q6UX46 152 aa15.47■□□□□ 0.07
ATXN3-253ENST00000621269 GTSF1Q8WW33 167 aa15.47■□□□□ 0.07
ATXN3-253ENST00000621269 GATCO43716 136 aaKnown RBP15.46■□□□□ 0.07
ATXN3-253ENST00000621269 AP5S1Q9NUS5 200 aa15.46■□□□□ 0.07
ATXN3-253ENST00000621269 RPL37AP61513 92 aaKnown RBP15.45■□□□□ 0.06
ATXN3-253ENST00000621269 CEBPGP53567 150 aa15.44■□□□□ 0.06
ATXN3-253ENST00000621269 CNBPP62633 177 aaKnown RBP15.44■□□□□ 0.06
ATXN3-253ENST00000621269 TEX261Q6UWH6 196 aa15.44■□□□□ 0.06
ATXN3-253ENST00000621269 SDIM1Q6ZPB5 146 aa15.44■□□□□ 0.06
ATXN3-253ENST00000621269 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.44■□□□□ 0.06
ATXN3-253ENST00000621269 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.43■□□□□ 0.06
ATXN3-253ENST00000621269 A8MWL6 223 aa15.43■□□□□ 0.06
ATXN3-253ENST00000621269 AMMECR1LQ6DCA0 310 aa15.43■□□□□ 0.06
ATXN3-253ENST00000621269 FAM231DQ6ZW35 169 aa15.43■□□□□ 0.06
ATXN3-253ENST00000621269 RPL39LQ96EH5 51 aaKnown RBP15.43■□□□□ 0.06
ATXN3-253ENST00000621269 NCR2O95944 276 aa15.42■□□□□ 0.06
ATXN3-253ENST00000621269 FOXA3P55318 350 aaPredicted RBP15.42■□□□□ 0.06
ATXN3-253ENST00000621269 hCG_2014768A0A024R1R8 64 aa15.41■□□□□ 0.06
ATXN3-253ENST00000621269 IGKV3OR2-268A0A0C4DH90 116 aa15.41■□□□□ 0.06
ATXN3-253ENST00000621269 BORCS7Q96B45 105 aa15.41■□□□□ 0.06
ATXN3-253ENST00000621269 IGHV3-64A0A075B6Q5 118 aa15.4■□□□□ 0.06
ATXN3-253ENST00000621269 APCSP02743 223 aa15.4■□□□□ 0.06
ATXN3-253ENST00000621269 LYPD6BQ8NI32 183 aa15.4■□□□□ 0.06
ATXN3-253ENST00000621269 GAGE12HA6NDE8 117 aa15.39■□□□□ 0.05
ATXN3-253ENST00000621269 PANO1I0J062 215 aa15.39■□□□□ 0.05
ATXN3-253ENST00000621269 OXTP01178 125 aa15.39■□□□□ 0.05
ATXN3-253ENST00000621269 RNASEKQ6P5S7 137 aaKnown RBP15.39■□□□□ 0.05
ATXN3-253ENST00000621269 CFAP161Q6P656 301 aa15.39■□□□□ 0.05
ATXN3-253ENST00000621269 DPH3Q96FX2 82 aa15.39■□□□□ 0.05
ATXN3-253ENST00000621269 SDHAF1A6NFY7 115 aa15.38■□□□□ 0.05
ATXN3-253ENST00000621269 H7C423 109 aa15.38■□□□□ 0.05
ATXN3-253ENST00000621269 CT83Q5H943 113 aa15.38■□□□□ 0.05
ATXN3-253ENST00000621269 EIF5A2Q9GZV4 153 aaKnown RBP15.38■□□□□ 0.05
ATXN3-253ENST00000621269 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.37■□□□□ 0.05
ATXN3-253ENST00000621269 IGKV2-29A2NJV5 120 aaPredicted RBP15.37■□□□□ 0.05
ATXN3-253ENST00000621269 SLPIP03973 132 aa15.36■□□□□ 0.05
ATXN3-253ENST00000621269 PMCHP20382 165 aa15.36■□□□□ 0.05
ATXN3-253ENST00000621269 SMIM7Q9BQ49 75 aa15.36■□□□□ 0.05
ATXN3-253ENST00000621269 I3L3M4 83 aa15.35■□□□□ 0.05
ATXN3-253ENST00000621269 FGF6P10767 208 aa15.35■□□□□ 0.05
ATXN3-253ENST00000621269 CIRBPQ14011 172 aaKnown RBP15.34■□□□□ 0.05
ATXN3-253ENST00000621269 CHCHD10Q8WYQ3 142 aaPredicted RBP15.34■□□□□ 0.05
ATXN3-253ENST00000621269 TRBV6-5A0A0K0K1A5 114 aa15.33■□□□□ 0.04
ATXN3-253ENST00000621269 LINC01551Q86U37 167 aa15.33■□□□□ 0.04
ATXN3-253ENST00000621269 C15orf56Q8N910 161 aa15.33■□□□□ 0.04
ATXN3-253ENST00000621269 BTF3L4Q96K17 158 aa15.33■□□□□ 0.04
ATXN3-253ENST00000621269 ST20Q9HBF5 79 aa15.33■□□□□ 0.04
ATXN3-253ENST00000621269 A0A1B0GUT8 65 aa15.32■□□□□ 0.04
ATXN3-253ENST00000621269 ZNF727A8MUV8 499 aa15.32■□□□□ 0.04
ATXN3-253ENST00000621269 ZNF25P17030 456 aaPredicted RBP15.32■□□□□ 0.04
ATXN3-253ENST00000621269 TSKUQ8WUA8 353 aa15.32■□□□□ 0.04
ATXN3-253ENST00000621269 RNF185Q96GF1 192 aa15.32■□□□□ 0.04
ATXN3-253ENST00000621269 TMEM101Q96IK0 257 aa15.32■□□□□ 0.04
ATXN3-253ENST00000621269 HIGD1CA8MV81 97 aa15.31■□□□□ 0.04
ATXN3-253ENST00000621269 NDUFS6O75380 124 aaKnown RBP15.31■□□□□ 0.04
ATXN3-253ENST00000621269 RPS10P46783 165 aaKnown RBP15.3■□□□□ 0.04
ATXN3-253ENST00000621269 HIGD2BQ4VC39 106 aa15.3■□□□□ 0.04
ATXN3-253ENST00000621269 FAM210AQ96ND0 272 aa15.3■□□□□ 0.04
ATXN3-253ENST00000621269 TMEM191AQ9H0A3 160 aa15.3■□□□□ 0.04
ATXN3-253ENST00000621269 FAM231BA6NCW3 169 aa15.29■□□□□ 0.04
ATXN3-253ENST00000621269 CHTF8P0CG12 524 aa15.29■□□□□ 0.04
ATXN3-253ENST00000621269 SERTAD4-AS1Q5TG53 156 aa15.29■□□□□ 0.04
ATXN3-253ENST00000621269 OR5A1Q8NGJ0 315 aa15.29■□□□□ 0.04
ATXN3-253ENST00000621269 OSTCQ9NRP0 149 aa15.29■□□□□ 0.04
ATXN3-253ENST00000621269 A0A087WYN8 130 aa15.28■□□□□ 0.04
ATXN3-253ENST00000621269 GAS8-AS1O95177 125 aa15.28■□□□□ 0.04
ATXN3-253ENST00000621269 HNRNPA3P51991 378 aaKnown RBP15.28■□□□□ 0.04
ATXN3-253ENST00000621269 SPACA4Q8TDM5 124 aa15.28■□□□□ 0.04
ATXN3-253ENST00000621269 TSHBP01222 138 aa15.27■□□□□ 0.04
ATXN3-253ENST00000621269 SRP19P09132 144 aaKnown RBP15.27■□□□□ 0.04
ATXN3-253ENST00000621269 MRAP2Q96G30 205 aa15.27■□□□□ 0.04
ATXN3-253ENST00000621269 TMEM242Q9NWH2 141 aa15.27■□□□□ 0.04
ATXN3-253ENST00000621269 ESDP10768 282 aa15.26■□□□□ 0.03
ATXN3-253ENST00000621269 RAB4AP20338 218 aa15.26■□□□□ 0.03
ATXN3-253ENST00000621269 COX6A2Q02221 97 aa15.26■□□□□ 0.03
ATXN3-253ENST00000621269 LRP1Q07954 4544 aaKnown RBP15.26■□□□□ 0.03
ATXN3-253ENST00000621269 GVQW2A0A096LPI5 108 aaPredicted RBP15.25■□□□□ 0.03
ATXN3-253ENST00000621269 XCL1P47992 114 aa15.25■□□□□ 0.03
ATXN3-253ENST00000621269 FOXI1Q12951 378 aa15.25■□□□□ 0.03
ATXN3-253ENST00000621269 LINC00959A0A1B0GUT2 108 aa15.24■□□□□ 0.03
ATXN3-253ENST00000621269 RIGQ13278 110 aa15.24■□□□□ 0.03
ATXN3-253ENST00000621269 AMN1Q8IY45 258 aa15.24■□□□□ 0.03
ATXN3-253ENST00000621269 TRBV27A0A0K0K1C4 114 aa15.23■□□□□ 0.03
ATXN3-253ENST00000621269 CCL25O15444 150 aa15.23■□□□□ 0.03
ATXN3-253ENST00000621269 POLR2KP53803 58 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms