RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 MT-ND6P03923 174 aa9.2□□□□□ -0.94
MUC1-229ENST00000620770 AMTP48728 403 aa9.2□□□□□ -0.94
MUC1-229ENST00000620770 FABP9Q0Z7S8 132 aa9.2□□□□□ -0.94
MUC1-229ENST00000620770 COX19Q49B96 90 aa9.2□□□□□ -0.94
MUC1-229ENST00000620770 YPEL4Q96NS1 127 aa9.2□□□□□ -0.94
MUC1-229ENST00000620770 MRPL18Q9H0U6 180 aaKnown RBP9.2□□□□□ -0.94
MUC1-229ENST00000620770 LOC389332A0A1B0GUA5 103 aa9.19□□□□□ -0.94
MUC1-229ENST00000620770 TMEM262E9PQX1 116 aa9.19□□□□□ -0.94
MUC1-229ENST00000620770 GAGE6Q13070 117 aa9.19□□□□□ -0.94
MUC1-229ENST00000620770 TMEM243Q9BU79 118 aa9.19□□□□□ -0.94
MUC1-229ENST00000620770 VCYO14598 125 aa9.18□□□□□ -0.94
MUC1-229ENST00000620770 TSHBP01222 138 aa9.18□□□□□ -0.94
MUC1-229ENST00000620770 DNAH10OSP0CZ25 163 aa9.18□□□□□ -0.94
MUC1-229ENST00000620770 FCER1GP30273 86 aa9.18□□□□□ -0.94
MUC1-229ENST00000620770 POLR2KP53803 58 aaKnown RBP9.18□□□□□ -0.94
MUC1-229ENST00000620770 IQCJQ1A5X6 159 aa9.18□□□□□ -0.94
MUC1-229ENST00000620770 TTC32Q5I0X7 151 aa9.18□□□□□ -0.94
MUC1-229ENST00000620770 C20orf78Q9BR46 151 aa9.18□□□□□ -0.94
MUC1-229ENST00000620770 SMIM2Q9BVW6 85 aa9.18□□□□□ -0.94
MUC1-229ENST00000620770 KRTAP1-5Q9BYS1 174 aa9.18□□□□□ -0.94
MUC1-229ENST00000620770 MAP1LC3AQ9H492 121 aa9.18□□□□□ -0.94
MUC1-229ENST00000620770 TRAPPC1Q9Y5R8 145 aa9.18□□□□□ -0.94
MUC1-229ENST00000620770 A0A087WX48 190 aa9.17□□□□□ -0.94
MUC1-229ENST00000620770 TRBV27A0A0K0K1C4 114 aa9.17□□□□□ -0.94
MUC1-229ENST00000620770 PHOX2AO14813 284 aa9.17□□□□□ -0.94
MUC1-229ENST00000620770 UBE2L6O14933 153 aa9.17□□□□□ -0.94
MUC1-229ENST00000620770 LINC01556Q5JQF7 62 aa9.17□□□□□ -0.94
MUC1-229ENST00000620770 NIT1Q86X76 327 aa9.17□□□□□ -0.94
MUC1-229ENST00000620770 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.16□□□□□ -0.94
MUC1-229ENST00000620770 IGKV2-29A2NJV5 120 aaPredicted RBP9.16□□□□□ -0.94
MUC1-229ENST00000620770 MPV17L2Q567V2 206 aa9.16□□□□□ -0.94
MUC1-229ENST00000620770 KIR2DL4Q99706 377 aa9.16□□□□□ -0.94
MUC1-229ENST00000620770 LAMTOR2Q9Y2Q5 125 aa9.16□□□□□ -0.94
MUC1-229ENST00000620770 TRAV9-2A0A087WT02 112 aa9.15□□□□□ -0.94
MUC1-229ENST00000620770 S100A1P23297 94 aa9.15□□□□□ -0.94
MUC1-229ENST00000620770 Q6ZR54 194 aa9.15□□□□□ -0.94
MUC1-229ENST00000620770 LINC00336Q6ZUF6 198 aa9.15□□□□□ -0.94
MUC1-229ENST00000620770 TCAPO15273 167 aa9.14□□□□□ -0.95
MUC1-229ENST00000620770 PKIAP61925 76 aa9.14□□□□□ -0.95
MUC1-229ENST00000620770 RPL32P62910 135 aaKnown RBP9.14□□□□□ -0.95
MUC1-229ENST00000620770 C10orf126Q8N4M7 172 aa9.14□□□□□ -0.95
MUC1-229ENST00000620770 Q8N976 141 aa9.14□□□□□ -0.95
MUC1-229ENST00000620770 ALKBH7Q9BT30 221 aaPredicted RBP9.14□□□□□ -0.95
MUC1-229ENST00000620770 CHCHD7Q9BUK0 85 aa9.14□□□□□ -0.95
MUC1-229ENST00000620770 HECTD4Q9Y4D8 3996 aa9.14□□□□□ -0.95
MUC1-229ENST00000620770 RBX1P62877 108 aa9.13□□□□□ -0.95
MUC1-229ENST00000620770 AMMECR1LQ6DCA0 310 aa9.13□□□□□ -0.95
MUC1-229ENST00000620770 RNASEKQ6P5S7 137 aaKnown RBP9.13□□□□□ -0.95
MUC1-229ENST00000620770 Q9HAA7 133 aa9.13□□□□□ -0.95
MUC1-229ENST00000620770 KLK12Q9UKR0 248 aa9.13□□□□□ -0.95
MUC1-229ENST00000620770 ANGP03950 147 aaKnown RBP9.12□□□□□ -0.95
MUC1-229ENST00000620770 RAB5AP20339 215 aa9.12□□□□□ -0.95
MUC1-229ENST00000620770 C1orf134Q5TEV5 83 aa9.12□□□□□ -0.95
MUC1-229ENST00000620770 CLPSL2Q6UWE3 100 aa9.12□□□□□ -0.95
MUC1-229ENST00000620770 COLCA2A8K830 154 aa9.11□□□□□ -0.95
MUC1-229ENST00000620770 FGF6P10767 208 aa9.11□□□□□ -0.95
MUC1-229ENST00000620770 ESDP10768 282 aa9.11□□□□□ -0.95
MUC1-229ENST00000620770 IFI27P40305 119 aaPredicted RBP9.11□□□□□ -0.95
MUC1-229ENST00000620770 C6orf223Q8N319 242 aa9.11□□□□□ -0.95
MUC1-229ENST00000620770 Q8N8P6 123 aa9.11□□□□□ -0.95
MUC1-229ENST00000620770 IGLV4-60A0A075B6I1 120 aa9.1□□□□□ -0.95
MUC1-229ENST00000620770 PRSS3P2Q8NHM4 247 aa9.1□□□□□ -0.95
MUC1-229ENST00000620770 UBE2WQ96B02 151 aa9.1□□□□□ -0.95
MUC1-229ENST00000620770 NXT2Q9NPJ8 142 aaKnown RBP9.1□□□□□ -0.95
MUC1-229ENST00000620770 PRSS47A8MTI9 375 aa9.09□□□□□ -0.95
MUC1-229ENST00000620770 IBA57-AS1B1ANH7 110 aa9.09□□□□□ -0.95
MUC1-229ENST00000620770 K7EP13 123 aa9.09□□□□□ -0.95
MUC1-229ENST00000620770 CRPP02741 224 aa9.09□□□□□ -0.95
MUC1-229ENST00000620770 TRGC2P03986 189 aa9.09□□□□□ -0.95
MUC1-229ENST00000620770 RPL39P62891 51 aaKnown RBP9.09□□□□□ -0.95
MUC1-229ENST00000620770 DNAH2Q9P225 4427 aa9.08□□□□□ -0.96
MUC1-229ENST00000620770 IGKV3OR2-268A0A0C4DH90 116 aa9.08□□□□□ -0.96
MUC1-229ENST00000620770 H7C423 109 aa9.08□□□□□ -0.96
MUC1-229ENST00000620770 FA2HQ7L5A8 372 aa9.08□□□□□ -0.96
MUC1-229ENST00000620770 LINC00269Q8N2A0 174 aa9.08□□□□□ -0.96
MUC1-229ENST00000620770 C20orf203Q8NBC4 194 aa9.08□□□□□ -0.96
MUC1-229ENST00000620770 OR5A1Q8NGJ0 315 aa9.08□□□□□ -0.96
MUC1-229ENST00000620770 C18orf32Q8TCD1 76 aa9.08□□□□□ -0.96
MUC1-229ENST00000620770 TMEM18Q96B42 140 aa9.08□□□□□ -0.96
MUC1-229ENST00000620770 TMEM101Q96IK0 257 aa9.08□□□□□ -0.96
MUC1-229ENST00000620770 FAT2Q9NYQ8 4349 aa9.07□□□□□ -0.96
MUC1-229ENST00000620770 PRSS29PA6NIE9 313 aa9.07□□□□□ -0.96
MUC1-229ENST00000620770 LAGE3Q14657 143 aa9.07□□□□□ -0.96
MUC1-229ENST00000620770 DGAT2L7PQ6IED9 249 aa9.07□□□□□ -0.96
MUC1-229ENST00000620770 HERC2O95714 4834 aa9.06□□□□□ -0.96
MUC1-229ENST00000620770 A0A1B0GUV1 79 aa9.06□□□□□ -0.96
MUC1-229ENST00000620770 RTL8CO15255 209 aa9.06□□□□□ -0.96
MUC1-229ENST00000620770 ZNF25P17030 456 aaPredicted RBP9.06□□□□□ -0.96
MUC1-229ENST00000620770 BTF3P20290 206 aaKnown RBP9.06□□□□□ -0.96
MUC1-229ENST00000620770 ORMDL2Q53FV1 153 aa9.06□□□□□ -0.96
MUC1-229ENST00000620770 IGKV2D-24A0A075B6R9 120 aa9.05□□□□□ -0.96
MUC1-229ENST00000620770 TRAV8-3A0A0A6YYJ7 113 aa9.05□□□□□ -0.96
MUC1-229ENST00000620770 REG3AQ06141 175 aa9.05□□□□□ -0.96
MUC1-229ENST00000620770 SMAGPQ0VAQ4 97 aa9.05□□□□□ -0.96
MUC1-229ENST00000620770 RNASE13Q5GAN3 156 aaKnown RBP9.05□□□□□ -0.96
MUC1-229ENST00000620770 ENHOQ6UWT2 76 aa9.05□□□□□ -0.96
MUC1-229ENST00000620770 MRPL52Q86TS9 123 aaKnown RBP9.05□□□□□ -0.96
MUC1-229ENST00000620770 NFE4Q86UQ8 179 aa9.05□□□□□ -0.96
MUC1-229ENST00000620770 UBE2D4Q9Y2X8 147 aa9.05□□□□□ -0.96
MUC1-229ENST00000620770 A0A1B0GVY2 172 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms