RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 Q8N6K4 173 aa7.63□□□□□ -1.19
SMARCA1-205ENST00000617310 TMEM263Q8WUH6 116 aaKnown RBP7.63□□□□□ -1.19
SMARCA1-205ENST00000617310 PSMG3-AS1Q96PY0 264 aa7.63□□□□□ -1.19
SMARCA1-205ENST00000617310 OPRPNQ99935 248 aaPredicted RBP7.63□□□□□ -1.19
SMARCA1-205ENST00000617310 DMXL2Q8TDJ6 3036 aa7.62□□□□□ -1.19
SMARCA1-205ENST00000617310 TET2Q6N021 2002 aaPredicted RBP7.62□□□□□ -1.19
SMARCA1-205ENST00000617310 BOD1L2Q8IYS8 172 aa7.62□□□□□ -1.19
SMARCA1-205ENST00000617310 HERVK_113P63121 156 aa7.62□□□□□ -1.19
SMARCA1-205ENST00000617310 ATXN8Q156A1 80 aa7.62□□□□□ -1.19
SMARCA1-205ENST00000617310 C10orf91Q5T1B1 145 aa7.62□□□□□ -1.19
SMARCA1-205ENST00000617310 ZFP2Q6ZN57 461 aa7.62□□□□□ -1.19
SMARCA1-205ENST00000617310 ZNF747Q9BV97 191 aa7.62□□□□□ -1.19
SMARCA1-205ENST00000617310 CAMK2N2Q96S95 79 aa7.62□□□□□ -1.19
SMARCA1-205ENST00000617310 PRO0255Q9UI72 69 aa7.62□□□□□ -1.19
SMARCA1-205ENST00000617310 DMXL1Q9Y485 3027 aa7.62□□□□□ -1.19
SMARCA1-205ENST00000617310 IGHV4-4A0A075B6R2 117 aa7.61□□□□□ -1.19
SMARCA1-205ENST00000617310 RPL18AQ02543 176 aaKnown RBP7.61□□□□□ -1.19
SMARCA1-205ENST00000617310 PCP2Q8IVA1 136 aa7.61□□□□□ -1.19
SMARCA1-205ENST00000617310 KALRNO60229 2985 aa7.6□□□□□ -1.19
SMARCA1-205ENST00000617310 RAI1Q7Z5J4 1906 aaPredicted RBP7.6□□□□□ -1.19
SMARCA1-205ENST00000617310 F8WEM9 126 aa7.6□□□□□ -1.19
SMARCA1-205ENST00000617310 LGALS9BQ3B8N2 356 aa7.6□□□□□ -1.19
SMARCA1-205ENST00000617310 LGALS9CQ6DKI2 356 aa7.6□□□□□ -1.19
SMARCA1-205ENST00000617310 DAND5Q8N907 189 aa7.6□□□□□ -1.19
SMARCA1-205ENST00000617310 SCRT2Q9NQ03 307 aa7.6□□□□□ -1.19
SMARCA1-205ENST00000617310 TTC32Q5I0X7 151 aa7.59□□□□□ -1.19
SMARCA1-205ENST00000617310 DEFB131BA0A096LNP1 70 aa7.59□□□□□ -1.19
SMARCA1-205ENST00000617310 C9JAW5 83 aa7.59□□□□□ -1.19
SMARCA1-205ENST00000617310 LGALS9O00182 355 aa7.59□□□□□ -1.19
SMARCA1-205ENST00000617310 TRAV4A0A0B4J268 109 aa7.59□□□□□ -1.19
SMARCA1-205ENST00000617310 GHRHP01286 108 aa7.59□□□□□ -1.19
SMARCA1-205ENST00000617310 C2orf82Q6UX34 121 aa7.59□□□□□ -1.19
SMARCA1-205ENST00000617310 TMEM126AQ9H061 195 aa7.59□□□□□ -1.19
SMARCA1-205ENST00000617310 COL5A1P20908 1838 aaPredicted RBP7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 K7EMI3 77 aa7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 IGLC3P0DOY3 106 aa7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 PROK1P58294 105 aa7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 GAGE2BQ13066 116 aa7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 TEX48A0A1B0GUV7 120 aa7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 COX7A2LO14548 114 aa7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 DAZ2Q13117 558 aaKnown RBP7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 DAZ4Q86SG3 579 aaKnown RBP7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 DAZ3Q9NR90 486 aaKnown RBP7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 ATMQ13315 3056 aa7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 ADAMTS20P59510 1910 aa7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 K7ERJ3 54 aa7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 C10orf126Q8N4M7 172 aa7.58□□□□□ -1.2
SMARCA1-205ENST00000617310 AGRNO00468 2067 aa7.57□□□□□ -1.2
SMARCA1-205ENST00000617310 TEX15Q9BXT5 2789 aa7.57□□□□□ -1.2
SMARCA1-205ENST00000617310 IGLV2-18A0A075B6J9 118 aa7.57□□□□□ -1.2
SMARCA1-205ENST00000617310 CDPF1Q6NVV7 123 aa7.57□□□□□ -1.2
SMARCA1-205ENST00000617310 KLK5Q9Y337 293 aaPredicted RBP7.57□□□□□ -1.2
SMARCA1-205ENST00000617310 C19orf71A6NCJ1 209 aa7.57□□□□□ -1.2
SMARCA1-205ENST00000617310 CCL25O15444 150 aa7.57□□□□□ -1.2
SMARCA1-205ENST00000617310 CTRLP40313 264 aa7.57□□□□□ -1.2
SMARCA1-205ENST00000617310 SPANXA1Q9NS26 97 aa7.57□□□□□ -1.2
SMARCA1-205ENST00000617310 ZFAND6Q6FIF0 208 aa7.57□□□□□ -1.2
SMARCA1-205ENST00000617310 ZFAND2AQ8N6M9 145 aa7.57□□□□□ -1.2
SMARCA1-205ENST00000617310 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
SMARCA1-205ENST00000617310 IGLV2-8P01709 118 aa7.56□□□□□ -1.2
SMARCA1-205ENST00000617310 Q8N976 141 aa7.56□□□□□ -1.2
SMARCA1-205ENST00000617310 SNHG12Q9BXW3 62 aa7.56□□□□□ -1.2
SMARCA1-205ENST00000617310 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
SMARCA1-205ENST00000617310 SLC25A29Q8N8R3 303 aa7.56□□□□□ -1.2
SMARCA1-205ENST00000617310 ANKRD39Q53RE8 183 aa7.56□□□□□ -1.2
SMARCA1-205ENST00000617310 IGLV1-40P01703 118 aa7.55□□□□□ -1.2
SMARCA1-205ENST00000617310 COL6A5A8TX70 2615 aa7.55□□□□□ -1.2
SMARCA1-205ENST00000617310 TDRG1Q3Y452 100 aa7.55□□□□□ -1.2
SMARCA1-205ENST00000617310 DEFB105AQ8NG35 78 aa7.55□□□□□ -1.2
SMARCA1-205ENST00000617310 DNAJC30Q96LL9 226 aa7.55□□□□□ -1.2
SMARCA1-205ENST00000617310 TAL2Q16559 108 aa7.55□□□□□ -1.2
SMARCA1-205ENST00000617310 CRIP1P50238 77 aa7.54□□□□□ -1.2
SMARCA1-205ENST00000617310 SPAG11BQ08648 103 aa7.54□□□□□ -1.2
SMARCA1-205ENST00000617310 Q6ZUT4 128 aa7.54□□□□□ -1.2
SMARCA1-205ENST00000617310 MBD6Q96DN6 1003 aa7.54□□□□□ -1.2
SMARCA1-205ENST00000617310 CHD6Q8TD26 2715 aa7.54□□□□□ -1.2
SMARCA1-205ENST00000617310 VPS13CQ709C8 3753 aa7.54□□□□□ -1.2
SMARCA1-205ENST00000617310 COX8AP10176 69 aa7.54□□□□□ -1.2
SMARCA1-205ENST00000617310 LINC00269Q8N2A0 174 aa7.54□□□□□ -1.2
SMARCA1-205ENST00000617310 SPATA25Q9BR10 227 aa7.54□□□□□ -1.2
SMARCA1-205ENST00000617310 RETNQ9HD89 108 aa7.54□□□□□ -1.2
SMARCA1-205ENST00000617310 M0R2N4 97 aa7.54□□□□□ -1.2
SMARCA1-205ENST00000617310 PRR9Q5T870 116 aa7.54□□□□□ -1.2
SMARCA1-205ENST00000617310 IGHV4-28A0A0C4DH34 117 aa7.53□□□□□ -1.2
SMARCA1-205ENST00000617310 C20orf144Q9BQM9 153 aa7.53□□□□□ -1.2
SMARCA1-205ENST00000617310 MLST8Q9BVC4 326 aa7.53□□□□□ -1.2
SMARCA1-205ENST00000617310 TNRC6BQ9UPQ9 1833 aaKnown RBP7.53□□□□□ -1.2
SMARCA1-205ENST00000617310 LECT2O14960 151 aa7.53□□□□□ -1.2
SMARCA1-205ENST00000617310 HIST1H4AP62805 103 aaKnown RBP7.53□□□□□ -1.2
SMARCA1-205ENST00000617310 SH2D6Q7Z4S9 175 aa7.53□□□□□ -1.2
SMARCA1-205ENST00000617310 BAHCC1Q9P281 2608 aa7.53□□□□□ -1.2
SMARCA1-205ENST00000617310 Q6ZVH6 145 aa7.53□□□□□ -1.2
SMARCA1-205ENST00000617310 RNF183Q96D59 192 aa7.53□□□□□ -1.2
SMARCA1-205ENST00000617310 C11orf86A6NJI1 115 aa7.52□□□□□ -1.2
SMARCA1-205ENST00000617310 IGHV4-30-4P0DP06 118 aa7.52□□□□□ -1.2
SMARCA1-205ENST00000617310 OCIAD2Q56VL3 154 aa7.52□□□□□ -1.2
SMARCA1-205ENST00000617310 C20orf203Q8NBC4 194 aa7.52□□□□□ -1.2
SMARCA1-205ENST00000617310 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.52□□□□□ -1.21
SMARCA1-205ENST00000617310 ODF3L2Q3SX64 289 aa7.52□□□□□ -1.21
SMARCA1-205ENST00000617310 GAGE2AQ6NT46 116 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms