RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 TWIST1Q15672 202 aa11.12□□□□□ -0.63
CCL3-204ENST00000613922 REG3AQ06141 175 aa11.11□□□□□ -0.63
CCL3-204ENST00000613922 GATD1Q8NB37 220 aa11.11□□□□□ -0.63
CCL3-204ENST00000613922 CIRBP-AS1Q8TBR5 109 aa11.11□□□□□ -0.63
CCL3-204ENST00000613922 GTSF1Q8WW33 167 aa11.11□□□□□ -0.63
CCL3-204ENST00000613922 hCG_2014768A0A024R1R8 64 aa11.1□□□□□ -0.63
CCL3-204ENST00000613922 IGLV4-60A0A075B6I1 120 aa11.1□□□□□ -0.63
CCL3-204ENST00000613922 DGAT2L7PQ6IED9 249 aa11.1□□□□□ -0.63
CCL3-204ENST00000613922 FAM231DQ6ZW35 169 aa11.1□□□□□ -0.63
CCL3-204ENST00000613922 TRAV8-4A0A0B4J246 113 aa11.09□□□□□ -0.63
CCL3-204ENST00000613922 COTL1Q14019 142 aa11.09□□□□□ -0.63
CCL3-204ENST00000613922 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
CCL3-204ENST00000613922 GATCO43716 136 aaKnown RBP11.08□□□□□ -0.64
CCL3-204ENST00000613922 NDUFS6O75380 124 aaKnown RBP11.08□□□□□ -0.64
CCL3-204ENST00000613922 KRTAP10-4P60372 401 aaPredicted RBP11.08□□□□□ -0.64
CCL3-204ENST00000613922 C9orf163Q8N9P6 203 aa11.08□□□□□ -0.64
CCL3-204ENST00000613922 PKHD1L1Q86WI1 4243 aa11.07□□□□□ -0.64
CCL3-204ENST00000613922 IGLV10-54A0A075B6I4 117 aa11.07□□□□□ -0.64
CCL3-204ENST00000613922 TRAV26-2A0A0B4J265 109 aa11.07□□□□□ -0.64
CCL3-204ENST00000613922 A8MWL6 223 aa11.07□□□□□ -0.64
CCL3-204ENST00000613922 AMTP48728 403 aa11.07□□□□□ -0.64
CCL3-204ENST00000613922 CT83Q5H943 113 aa11.07□□□□□ -0.64
CCL3-204ENST00000613922 CLRN3Q8NCR9 226 aa11.07□□□□□ -0.64
CCL3-204ENST00000613922 DEFB104AQ8WTQ1 72 aa11.07□□□□□ -0.64
CCL3-204ENST00000613922 LRP1Q07954 4544 aaKnown RBP11.07□□□□□ -0.64
CCL3-204ENST00000613922 UBE2L6O14933 153 aa11.06□□□□□ -0.64
CCL3-204ENST00000613922 FOXA3P55318 350 aaPredicted RBP11.06□□□□□ -0.64
CCL3-204ENST00000613922 SMIM15Q7Z3B0 74 aa11.06□□□□□ -0.64
CCL3-204ENST00000613922 FAT3Q8TDW7 4589 aa11.06□□□□□ -0.64
CCL3-204ENST00000613922 NCR2O95944 276 aa11.05□□□□□ -0.64
CCL3-204ENST00000613922 RPL39LQ96EH5 51 aaKnown RBP11.05□□□□□ -0.64
CCL3-204ENST00000613922 TEX261Q6UWH6 196 aa11.04□□□□□ -0.64
CCL3-204ENST00000613922 KRTAP29-1A8MX34 341 aaPredicted RBP11.03□□□□□ -0.64
CCL3-204ENST00000613922 CEBPGP53567 150 aa11.03□□□□□ -0.64
CCL3-204ENST00000613922 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
CCL3-204ENST00000613922 LINC01551Q86U37 167 aa11.03□□□□□ -0.64
CCL3-204ENST00000613922 FAM210AQ96ND0 272 aa11.03□□□□□ -0.64
CCL3-204ENST00000613922 SMIM7Q9BQ49 75 aa11.03□□□□□ -0.64
CCL3-204ENST00000613922 SDIM1Q6ZPB5 146 aa11.02□□□□□ -0.65
CCL3-204ENST00000613922 EIF5A2Q9GZV4 153 aaKnown RBP11.02□□□□□ -0.65
CCL3-204ENST00000613922 TRBV6-5A0A0K0K1A5 114 aa11.01□□□□□ -0.65
CCL3-204ENST00000613922 SDHAF1A6NFY7 115 aa11.01□□□□□ -0.65
CCL3-204ENST00000613922 H7C423 109 aa11.01□□□□□ -0.65
CCL3-204ENST00000613922 TSKUQ8WUA8 353 aa11.01□□□□□ -0.65
CCL3-204ENST00000613922 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.01□□□□□ -0.65
CCL3-204ENST00000613922 hDV102S1A0JD36 115 aa11□□□□□ -0.65
CCL3-204ENST00000613922 FAM231BA6NCW3 169 aa11□□□□□ -0.65
CCL3-204ENST00000613922 J3QL48 77 aa11□□□□□ -0.65
CCL3-204ENST00000613922 APCSP02743 223 aa11□□□□□ -0.65
CCL3-204ENST00000613922 SRP19P09132 144 aaKnown RBP11□□□□□ -0.65
CCL3-204ENST00000613922 OSTCQ9NRP0 149 aa11□□□□□ -0.65
CCL3-204ENST00000613922 A0A1B0GUT8 65 aa10.99□□□□□ -0.65
CCL3-204ENST00000613922 ZNF727A8MUV8 499 aa10.99□□□□□ -0.65
CCL3-204ENST00000613922 HIGD1CA8MV81 97 aa10.99□□□□□ -0.65
CCL3-204ENST00000613922 PANO1I0J062 215 aa10.99□□□□□ -0.65
CCL3-204ENST00000613922 SLPIP03973 132 aa10.99□□□□□ -0.65
CCL3-204ENST00000613922 CIRBPQ14011 172 aaKnown RBP10.99□□□□□ -0.65
CCL3-204ENST00000613922 BORCS7Q96B45 105 aa10.99□□□□□ -0.65
CCL3-204ENST00000613922 TMEM191AQ9H0A3 160 aa10.99□□□□□ -0.65
CCL3-204ENST00000613922 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.98□□□□□ -0.65
CCL3-204ENST00000613922 IGKV2-29A2NJV5 120 aaPredicted RBP10.98□□□□□ -0.65
CCL3-204ENST00000613922 I3L3M4 83 aa10.98□□□□□ -0.65
CCL3-204ENST00000613922 GAS8-AS1O95177 125 aa10.98□□□□□ -0.65
CCL3-204ENST00000613922 AMMECR1LQ6DCA0 310 aa10.98□□□□□ -0.65
CCL3-204ENST00000613922 C15orf56Q8N910 161 aa10.98□□□□□ -0.65
CCL3-204ENST00000613922 AP5S1Q9NUS5 200 aa10.98□□□□□ -0.65
CCL3-204ENST00000613922 GAGE12HA6NDE8 117 aa10.97□□□□□ -0.65
CCL3-204ENST00000613922 FGF6P10767 208 aa10.97□□□□□ -0.65
CCL3-204ENST00000613922 RNF185Q96GF1 192 aa10.97□□□□□ -0.65
CCL3-204ENST00000613922 IGHV3-64A0A075B6Q5 118 aa10.96□□□□□ -0.65
CCL3-204ENST00000613922 IGKV3OR2-268A0A0C4DH90 116 aa10.96□□□□□ -0.65
CCL3-204ENST00000613922 A0A1B0GVG6 124 aa10.96□□□□□ -0.65
CCL3-204ENST00000613922 ESDP10768 282 aa10.96□□□□□ -0.65
CCL3-204ENST00000613922 ZNF25P17030 456 aaPredicted RBP10.96□□□□□ -0.65
CCL3-204ENST00000613922 PMCHP20382 165 aa10.96□□□□□ -0.65
CCL3-204ENST00000613922 RPL37AP61513 92 aaKnown RBP10.96□□□□□ -0.65
CCL3-204ENST00000613922 RNASEKQ6P5S7 137 aaKnown RBP10.96□□□□□ -0.65
CCL3-204ENST00000613922 CFAP161Q6P656 301 aa10.96□□□□□ -0.65
CCL3-204ENST00000613922 V9GYV3 84 aa10.96□□□□□ -0.65
CCL3-204ENST00000613922 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.95□□□□□ -0.66
CCL3-204ENST00000613922 TSHBP01222 138 aa10.95□□□□□ -0.66
CCL3-204ENST00000613922 RAB4AP20338 218 aa10.95□□□□□ -0.66
CCL3-204ENST00000613922 POLR2KP53803 58 aaKnown RBP10.95□□□□□ -0.66
CCL3-204ENST00000613922 CHCHD10Q8WYQ3 142 aaPredicted RBP10.95□□□□□ -0.66
CCL3-204ENST00000613922 MRAP2Q96G30 205 aa10.95□□□□□ -0.66
CCL3-204ENST00000613922 ST20Q9HBF5 79 aa10.95□□□□□ -0.66
CCL3-204ENST00000613922 RPS10P46783 165 aaKnown RBP10.94□□□□□ -0.66
CCL3-204ENST00000613922 OR5A1Q8NGJ0 315 aa10.94□□□□□ -0.66
CCL3-204ENST00000613922 ISOC2Q96AB3 205 aa10.94□□□□□ -0.66
CCL3-204ENST00000613922 TRBV27A0A0K0K1C4 114 aa10.93□□□□□ -0.66
CCL3-204ENST00000613922 FAM74A3Q4VXF1 159 aa10.93□□□□□ -0.66
CCL3-204ENST00000613922 AMN1Q8IY45 258 aa10.93□□□□□ -0.66
CCL3-204ENST00000613922 NUP35Q8NFH5 326 aa10.93□□□□□ -0.66
CCL3-204ENST00000613922 TMEM242Q9NWH2 141 aa10.93□□□□□ -0.66
CCL3-204ENST00000613922 OXTP01178 125 aa10.92□□□□□ -0.66
CCL3-204ENST00000613922 RPL23P62829 140 aaKnown RBP10.92□□□□□ -0.66
CCL3-204ENST00000613922 FOXI1Q12951 378 aa10.92□□□□□ -0.66
CCL3-204ENST00000613922 RIGQ13278 110 aa10.92□□□□□ -0.66
CCL3-204ENST00000613922 TMEM241Q24JQ0 296 aa10.92□□□□□ -0.66
CCL3-204ENST00000613922 C9JQL5 133 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms