RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 TRAV8-4A0A0B4J246 113 aa14.76□□□□□ -0.05
FAM228B-208ENST00000613899 GATCO43716 136 aaKnown RBP14.76□□□□□ -0.05
FAM228B-208ENST00000613899 PRSS1P07477 247 aa14.76□□□□□ -0.05
FAM228B-208ENST00000613899 AMTP48728 403 aa14.76□□□□□ -0.05
FAM228B-208ENST00000613899 DGAT2L7PQ6IED9 249 aa14.76□□□□□ -0.05
FAM228B-208ENST00000613899 FAM231DQ6ZW35 169 aa14.76□□□□□ -0.05
FAM228B-208ENST00000613899 GTSF1Q8WW33 167 aa14.76□□□□□ -0.05
FAM228B-208ENST00000613899 IGLV10-54A0A075B6I4 117 aa14.75□□□□□ -0.05
FAM228B-208ENST00000613899 GATD1Q8NB37 220 aa14.75□□□□□ -0.05
FAM228B-208ENST00000613899 IGLV4-60A0A075B6I1 120 aa14.74□□□□□ -0.05
FAM228B-208ENST00000613899 TRAV26-2A0A0B4J265 109 aa14.74□□□□□ -0.05
FAM228B-208ENST00000613899 A8MWL6 223 aa14.74□□□□□ -0.05
FAM228B-208ENST00000613899 CEBPGP53567 150 aa14.74□□□□□ -0.05
FAM228B-208ENST00000613899 CLRN3Q8NCR9 226 aa14.74□□□□□ -0.05
FAM228B-208ENST00000613899 CIRBP-AS1Q8TBR5 109 aa14.74□□□□□ -0.05
FAM228B-208ENST00000613899 HERC1Q15751 4861 aa14.74□□□□□ -0.05
FAM228B-208ENST00000613899 CT83Q5H943 113 aa14.73□□□□□ -0.05
FAM228B-208ENST00000613899 TEX261Q6UWH6 196 aa14.73□□□□□ -0.05
FAM228B-208ENST00000613899 NDUFS6O75380 124 aaKnown RBP14.72□□□□□ -0.05
FAM228B-208ENST00000613899 DEFB104AQ8WTQ1 72 aa14.72□□□□□ -0.05
FAM228B-208ENST00000613899 C9orf163Q8N9P6 203 aa14.71□□□□□ -0.05
FAM228B-208ENST00000613899 BORCS7Q96B45 105 aa14.71□□□□□ -0.05
FAM228B-208ENST00000613899 EIF5A2Q9GZV4 153 aaKnown RBP14.71□□□□□ -0.05
FAM228B-208ENST00000613899 GFRA4Q9GZZ7 299 aa14.71□□□□□ -0.05
FAM228B-208ENST00000613899 NCR2O95944 276 aa14.7□□□□□ -0.06
FAM228B-208ENST00000613899 SMIM7Q9BQ49 75 aa14.7□□□□□ -0.06
FAM228B-208ENST00000613899 RPL39LQ96EH5 51 aaKnown RBP14.69□□□□□ -0.06
FAM228B-208ENST00000613899 FOXA3P55318 350 aaPredicted RBP14.68□□□□□ -0.06
FAM228B-208ENST00000613899 FAM210AQ96ND0 272 aa14.68□□□□□ -0.06
FAM228B-208ENST00000613899 hDV102S1A0JD36 115 aa14.67□□□□□ -0.06
FAM228B-208ENST00000613899 SDHAF1A6NFY7 115 aa14.67□□□□□ -0.06
FAM228B-208ENST00000613899 APCSP02743 223 aa14.67□□□□□ -0.06
FAM228B-208ENST00000613899 LCE2DQ5TA82 110 aaPredicted RBP14.67□□□□□ -0.06
FAM228B-208ENST00000613899 LINC01551Q86U37 167 aa14.67□□□□□ -0.06
FAM228B-208ENST00000613899 H7C423 109 aa14.66□□□□□ -0.06
FAM228B-208ENST00000613899 J3QL48 77 aa14.66□□□□□ -0.06
FAM228B-208ENST00000613899 CNBPP62633 177 aaKnown RBP14.66□□□□□ -0.06
FAM228B-208ENST00000613899 AMMECR1LQ6DCA0 310 aa14.66□□□□□ -0.06
FAM228B-208ENST00000613899 ZNF727A8MUV8 499 aa14.65□□□□□ -0.06
FAM228B-208ENST00000613899 TSKUQ8WUA8 353 aa14.65□□□□□ -0.06
FAM228B-208ENST00000613899 AP5S1Q9NUS5 200 aa14.65□□□□□ -0.06
FAM228B-208ENST00000613899 FAM231BA6NCW3 169 aa14.64□□□□□ -0.07
FAM228B-208ENST00000613899 HIGD1CA8MV81 97 aa14.64□□□□□ -0.07
FAM228B-208ENST00000613899 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.63□□□□□ -0.07
FAM228B-208ENST00000613899 TRBV6-5A0A0K0K1A5 114 aa14.63□□□□□ -0.07
FAM228B-208ENST00000613899 A0A1B0GUT8 65 aa14.63□□□□□ -0.07
FAM228B-208ENST00000613899 KRTAP10-4P60372 401 aaPredicted RBP14.63□□□□□ -0.07
FAM228B-208ENST00000613899 OSTCQ9NRP0 149 aa14.63□□□□□ -0.07
FAM228B-208ENST00000613899 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.62□□□□□ -0.07
FAM228B-208ENST00000613899 IGKV2-29A2NJV5 120 aaPredicted RBP14.62□□□□□ -0.07
FAM228B-208ENST00000613899 I3L3M4 83 aa14.62□□□□□ -0.07
FAM228B-208ENST00000613899 SRP19P09132 144 aaKnown RBP14.62□□□□□ -0.07
FAM228B-208ENST00000613899 RNASEKQ6P5S7 137 aaKnown RBP14.62□□□□□ -0.07
FAM228B-208ENST00000613899 TMEM191AQ9H0A3 160 aa14.62□□□□□ -0.07
FAM228B-208ENST00000613899 IGKV3OR2-268A0A0C4DH90 116 aa14.61□□□□□ -0.07
FAM228B-208ENST00000613899 KRTAP29-1A8MX34 341 aaPredicted RBP14.61□□□□□ -0.07
FAM228B-208ENST00000613899 ZNF25P17030 456 aaPredicted RBP14.61□□□□□ -0.07
FAM228B-208ENST00000613899 PMCHP20382 165 aa14.61□□□□□ -0.07
FAM228B-208ENST00000613899 SDIM1Q6ZPB5 146 aa14.61□□□□□ -0.07
FAM228B-208ENST00000613899 GAGE12HA6NDE8 117 aa14.6□□□□□ -0.07
FAM228B-208ENST00000613899 FGF6P10767 208 aa14.6□□□□□ -0.07
FAM228B-208ENST00000613899 CFAP161Q6P656 301 aa14.6□□□□□ -0.07
FAM228B-208ENST00000613899 ST20Q9HBF5 79 aa14.6□□□□□ -0.07
FAM228B-208ENST00000613899 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.6□□□□□ -0.07
FAM228B-208ENST00000613899 IGHV3-64A0A075B6Q5 118 aa14.59□□□□□ -0.07
FAM228B-208ENST00000613899 RPL37AP61513 92 aaKnown RBP14.58□□□□□ -0.08
FAM228B-208ENST00000613899 MRAP2Q96G30 205 aa14.58□□□□□ -0.08
FAM228B-208ENST00000613899 BTF3L4Q96K17 158 aa14.58□□□□□ -0.08
FAM228B-208ENST00000613899 FAM74A3Q4VXF1 159 aa14.57□□□□□ -0.08
FAM228B-208ENST00000613899 C15orf56Q8N910 161 aa14.57□□□□□ -0.08
FAM228B-208ENST00000613899 CHCHD10Q8WYQ3 142 aaPredicted RBP14.57□□□□□ -0.08
FAM228B-208ENST00000613899 V9GYV3 84 aa14.57□□□□□ -0.08
FAM228B-208ENST00000613899 GAS8-AS1O95177 125 aa14.56□□□□□ -0.08
FAM228B-208ENST00000613899 CIRBPQ14011 172 aaKnown RBP14.56□□□□□ -0.08
FAM228B-208ENST00000613899 ISOC2Q96AB3 205 aa14.56□□□□□ -0.08
FAM228B-208ENST00000613899 RNF185Q96GF1 192 aa14.56□□□□□ -0.08
FAM228B-208ENST00000613899 TMEM101Q96IK0 257 aa14.56□□□□□ -0.08
FAM228B-208ENST00000613899 A0A1B0GVG6 124 aa14.55□□□□□ -0.08
FAM228B-208ENST00000613899 PANO1I0J062 215 aa14.55□□□□□ -0.08
FAM228B-208ENST00000613899 ESDP10768 282 aa14.55□□□□□ -0.08
FAM228B-208ENST00000613899 RAB4AP20338 218 aa14.55□□□□□ -0.08
FAM228B-208ENST00000613899 RIGQ13278 110 aa14.55□□□□□ -0.08
FAM228B-208ENST00000613899 TMEM241Q24JQ0 296 aa14.55□□□□□ -0.08
FAM228B-208ENST00000613899 AMN1Q8IY45 258 aa14.55□□□□□ -0.08
FAM228B-208ENST00000613899 OR5A1Q8NGJ0 315 aa14.55□□□□□ -0.08
FAM228B-208ENST00000613899 TMEM242Q9NWH2 141 aa14.55□□□□□ -0.08
FAM228B-208ENST00000613899 TSHBP01222 138 aa14.54□□□□□ -0.08
FAM228B-208ENST00000613899 SLPIP03973 132 aa14.54□□□□□ -0.08
FAM228B-208ENST00000613899 TRBV27A0A0K0K1C4 114 aa14.53□□□□□ -0.08
FAM228B-208ENST00000613899 RPS10P46783 165 aaKnown RBP14.53□□□□□ -0.08
FAM228B-208ENST00000613899 POLR2KP53803 58 aaKnown RBP14.53□□□□□ -0.08
FAM228B-208ENST00000613899 NUP35Q8NFH5 326 aa14.53□□□□□ -0.08
FAM228B-208ENST00000613899 NAT8BQ9UHF3 227 aa14.53□□□□□ -0.08
FAM228B-208ENST00000613899 RPL23P62829 140 aaKnown RBP14.52□□□□□ -0.09
FAM228B-208ENST00000613899 C7orf77A4D0Y5 90 aa14.51□□□□□ -0.09
FAM228B-208ENST00000613899 PPP1R17O96001 155 aa14.51□□□□□ -0.09
FAM228B-208ENST00000613899 ADIRFQ15847 76 aa14.51□□□□□ -0.09
FAM228B-208ENST00000613899 HIGD2BQ4VC39 106 aa14.51□□□□□ -0.09
FAM228B-208ENST00000613899 MRPL52Q86TS9 123 aaKnown RBP14.51□□□□□ -0.09
FAM228B-208ENST00000613899 NAT8Q9UHE5 227 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms