RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 EBI3Q14213 229 aa13.14□□□□□ -0.31
HMGXB3-206ENST00000613459 COL4A3Q01955 1670 aa13.14□□□□□ -0.31
HMGXB3-206ENST00000613459 LMO4P61968 165 aa13.13□□□□□ -0.31
HMGXB3-206ENST00000613459 CLUHP3Q96NS8 147 aa13.13□□□□□ -0.31
HMGXB3-206ENST00000613459 ESM1Q9NQ30 184 aa13.13□□□□□ -0.31
HMGXB3-206ENST00000613459 DNAJC9-AS1A6NH13 148 aa13.13□□□□□ -0.31
HMGXB3-206ENST00000613459 ATP5EP56381 51 aaPredicted RBP13.13□□□□□ -0.31
HMGXB3-206ENST00000613459 A0A1W2PNU3 283 aaPredicted RBP13.13□□□□□ -0.31
HMGXB3-206ENST00000613459 EIF4EBP1Q13541 118 aaPredicted RBP13.13□□□□□ -0.31
HMGXB3-206ENST00000613459 REG3AQ06141 175 aa13.12□□□□□ -0.31
HMGXB3-206ENST00000613459 TRBV30A0A0K0K1B3 111 aa13.12□□□□□ -0.31
HMGXB3-206ENST00000613459 SDIM1Q6ZPB5 146 aa13.12□□□□□ -0.31
HMGXB3-206ENST00000613459 U3KQK5 164 aa13.12□□□□□ -0.31
HMGXB3-206ENST00000613459 TNRC6BQ9UPQ9 1833 aaKnown RBP13.11□□□□□ -0.31
HMGXB3-206ENST00000613459 Q6YL49 198 aa13.11□□□□□ -0.31
HMGXB3-206ENST00000613459 FAM240AA0A1B0GVK7 77 aa13.11□□□□□ -0.31
HMGXB3-206ENST00000613459 CEMP1Q6PRD7 247 aaPredicted RBP13.11□□□□□ -0.31
HMGXB3-206ENST00000613459 LINC00322Q6ZN03 302 aaPredicted RBP13.11□□□□□ -0.31
HMGXB3-206ENST00000613459 C20orf197Q8N268 126 aa13.1□□□□□ -0.31
HMGXB3-206ENST00000613459 ZNF295-AS1Q8N0V1 137 aa13.1□□□□□ -0.31
HMGXB3-206ENST00000613459 KIF26AQ9ULI4 1882 aaPredicted RBP13.1□□□□□ -0.31
HMGXB3-206ENST00000613459 MRPL55Q7Z7F7 128 aaKnown RBP13.09□□□□□ -0.31
HMGXB3-206ENST00000613459 Q8NA96 180 aa13.09□□□□□ -0.31
HMGXB3-206ENST00000613459 TIMM17BO60830 172 aa13.09□□□□□ -0.31
HMGXB3-206ENST00000613459 C11orf45Q8TAV5 145 aa13.09□□□□□ -0.31
HMGXB3-206ENST00000613459 DEFB1P60022 68 aa13.09□□□□□ -0.31
HMGXB3-206ENST00000613459 IGKV4-1P06312 121 aa13.08□□□□□ -0.31
HMGXB3-206ENST00000613459 BRWD1-AS2P59051 145 aa13.08□□□□□ -0.31
HMGXB3-206ENST00000613459 PYGO1Q9Y3Y4 419 aa13.08□□□□□ -0.31
HMGXB3-206ENST00000613459 V9GYY9 64 aa13.08□□□□□ -0.31
HMGXB3-206ENST00000613459 NACAE9PAV3 2078 aa13.08□□□□□ -0.32
HMGXB3-206ENST00000613459 ZNF22P17026 224 aaPredicted RBP13.08□□□□□ -0.32
HMGXB3-206ENST00000613459 FAM222AQ5U5X8 452 aa13.08□□□□□ -0.32
HMGXB3-206ENST00000613459 DEFB114Q30KQ6 69 aa13.08□□□□□ -0.32
HMGXB3-206ENST00000613459 SPTSSBQ8NFR3 76 aa13.07□□□□□ -0.32
HMGXB3-206ENST00000613459 Q6ZTI0 123 aa13.07□□□□□ -0.32
HMGXB3-206ENST00000613459 CHCHD10Q8WYQ3 142 aaPredicted RBP13.07□□□□□ -0.32
HMGXB3-206ENST00000613459 IGLV4-3A0A075B6K6 122 aa13.07□□□□□ -0.32
HMGXB3-206ENST00000613459 TRBV6-4A0A1B0GX49 114 aa13.07□□□□□ -0.32
HMGXB3-206ENST00000613459 TRBV6-5A0A0K0K1A5 114 aa13.07□□□□□ -0.32
HMGXB3-206ENST00000613459 NDUFC1O43677 76 aa13.06□□□□□ -0.32
HMGXB3-206ENST00000613459 MPLKIPQ8TAP9 179 aa13.06□□□□□ -0.32
HMGXB3-206ENST00000613459 LINC00308Q8TCZ7 52 aa13.06□□□□□ -0.32
HMGXB3-206ENST00000613459 ENHOQ6UWT2 76 aa13.06□□□□□ -0.32
HMGXB3-206ENST00000613459 LINC00269Q8N2A0 174 aa13.06□□□□□ -0.32
HMGXB3-206ENST00000613459 LINC00467Q9BRT7 94 aa13.06□□□□□ -0.32
HMGXB3-206ENST00000613459 IMUPQ9GZP8 106 aa13.06□□□□□ -0.32
HMGXB3-206ENST00000613459 LY6LH3BQJ8 138 aa13.05□□□□□ -0.32
HMGXB3-206ENST00000613459 ARHGAP21Q5T5U3 1957 aa13.05□□□□□ -0.32
HMGXB3-206ENST00000613459 TRIAP1O43715 76 aa13.05□□□□□ -0.32
HMGXB3-206ENST00000613459 ZFAND3Q9H8U3 227 aa13.05□□□□□ -0.32
HMGXB3-206ENST00000613459 ZFHX2Q9C0A1 2572 aaPredicted RBP13.04□□□□□ -0.32
HMGXB3-206ENST00000613459 MIFP14174 115 aa13.04□□□□□ -0.32
HMGXB3-206ENST00000613459 NRGNQ92686 78 aa13.04□□□□□ -0.32
HMGXB3-206ENST00000613459 DEFB4AO15263 64 aa13.04□□□□□ -0.32
HMGXB3-206ENST00000613459 OBSL1O75147 1896 aa13.04□□□□□ -0.32
HMGXB3-206ENST00000613459 CDKN2A-AS1Q9UH64 79 aa13.03□□□□□ -0.32
HMGXB3-206ENST00000613459 USP17L23D6RBM5 183 aa13.03□□□□□ -0.32
HMGXB3-206ENST00000613459 M0QY20 66 aa13.03□□□□□ -0.32
HMGXB3-206ENST00000613459 HILS1P60008 231 aa13.02□□□□□ -0.32
HMGXB3-206ENST00000613459 Q6ZPA2 131 aa13.02□□□□□ -0.32
HMGXB3-206ENST00000613459 PIK3CD-AS1Q5SR53 167 aa13.02□□□□□ -0.33
HMGXB3-206ENST00000613459 MUC7Q8TAX7 377 aa13.02□□□□□ -0.33
HMGXB3-206ENST00000613459 TRBV27A0A0K0K1C4 114 aa13.02□□□□□ -0.33
HMGXB3-206ENST00000613459 WISP2O76076 250 aa13.02□□□□□ -0.33
HMGXB3-206ENST00000613459 IGHV4-31P0DP07 118 aa13.02□□□□□ -0.33
HMGXB3-206ENST00000613459 CFAP126Q5VTH2 177 aa13.02□□□□□ -0.33
HMGXB3-206ENST00000613459 PRORYQ9H606 182 aa13.02□□□□□ -0.33
HMGXB3-206ENST00000613459 MAPKAPK5-AS1Q8N8E1 139 aa13.01□□□□□ -0.33
HMGXB3-206ENST00000613459 TRBV6-8A0A0A6YYG3 113 aa13.01□□□□□ -0.33
HMGXB3-206ENST00000613459 PRR15LQ9BU68 103 aa13.01□□□□□ -0.33
HMGXB3-206ENST00000613459 NDUFA7O95182 113 aa13.01□□□□□ -0.33
HMGXB3-206ENST00000613459 CASC2Q6XLA1 102 aa13.01□□□□□ -0.33
HMGXB3-206ENST00000613459 C20orf173Q96LM9 149 aa13.01□□□□□ -0.33
HMGXB3-206ENST00000613459 SERP2Q8N6R1 65 aa13□□□□□ -0.33
HMGXB3-206ENST00000613459 RNF185Q96GF1 192 aa13□□□□□ -0.33
HMGXB3-206ENST00000613459 CRIP3Q6Q6R5 217 aa12.99□□□□□ -0.33
HMGXB3-206ENST00000613459 CRYGDP07320 174 aa12.99□□□□□ -0.33
HMGXB3-206ENST00000613459 C2orf91Q6ZV80 131 aa12.99□□□□□ -0.33
HMGXB3-206ENST00000613459 MRPS12O15235 138 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-206ENST00000613459 C2orf16Q68DN1 1984 aa12.99□□□□□ -0.33
HMGXB3-206ENST00000613459 LINC01548A6NM66 108 aa12.98□□□□□ -0.33
HMGXB3-206ENST00000613459 HIGD2AQ9BW72 106 aa12.98□□□□□ -0.33
HMGXB3-206ENST00000613459 ZNF106Q9H2Y7 1883 aaKnown RBP12.97□□□□□ -0.33
HMGXB3-206ENST00000613459 SLPIP03973 132 aa12.97□□□□□ -0.33
HMGXB3-206ENST00000613459 LINC00310P59036 64 aa12.97□□□□□ -0.33
HMGXB3-206ENST00000613459 Q8N976 141 aa12.97□□□□□ -0.33
HMGXB3-206ENST00000613459 K7ERS5 55 aa12.97□□□□□ -0.33
HMGXB3-206ENST00000613459 DYSFO75923 2080 aa12.97□□□□□ -0.33
HMGXB3-206ENST00000613459 FAM19A1Q7Z5A9 133 aa12.97□□□□□ -0.33
HMGXB3-206ENST00000613459 MRPS36P82909 103 aaKnown RBP12.96□□□□□ -0.33
HMGXB3-206ENST00000613459 FAM208BQ5VWN6 2430 aa12.96□□□□□ -0.34
HMGXB3-206ENST00000613459 TMEM131Q92545 1883 aa12.96□□□□□ -0.34
HMGXB3-206ENST00000613459 DEFB131BA0A096LNP1 70 aa12.95□□□□□ -0.34
HMGXB3-206ENST00000613459 SCXQ7RTU7 201 aa12.95□□□□□ -0.34
HMGXB3-206ENST00000613459 CRIP1P50238 77 aa12.95□□□□□ -0.34
HMGXB3-206ENST00000613459 C1orf229Q6ZS94 237 aaPredicted RBP12.95□□□□□ -0.34
HMGXB3-206ENST00000613459 IGKV2-24A0A0C4DH68 120 aa12.94□□□□□ -0.34
HMGXB3-206ENST00000613459 DHRS4-AS1Q9P1J3 65 aa12.94□□□□□ -0.34
HMGXB3-206ENST00000613459 C11orf71Q6IPW1 123 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms