RNA–Protein interactions for RNA: ENST00000612991.4

RELA-226, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 1 (best) BASIC

Gene RELA, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-226ENST00000612991 PMVKQ15126 192 aa13.01□□□□□ -0.33
RELA-226ENST00000612991 C20orf203Q8NBC4 194 aa13.01□□□□□ -0.33
RELA-226ENST00000612991 RNASE8Q8TDE3 154 aaKnown RBP13.01□□□□□ -0.33
RELA-226ENST00000612991 TMEM141Q96I45 108 aa13.01□□□□□ -0.33
RELA-226ENST00000612991 TIMM17AQ99595 171 aa13.01□□□□□ -0.33
RELA-226ENST00000612991 IGHV3-38A0A0C4DH36 116 aa13□□□□□ -0.33
RELA-226ENST00000612991 SIVA1O15304 175 aa13□□□□□ -0.33
RELA-226ENST00000612991 IGHV3-53P01767 116 aa13□□□□□ -0.33
RELA-226ENST00000612991 CMC4P56277 68 aaPredicted RBP13□□□□□ -0.33
RELA-226ENST00000612991 RS1O15537 224 aa13□□□□□ -0.33
RELA-226ENST00000612991 HSD52Q0P140 79 aa13□□□□□ -0.33
RELA-226ENST00000612991 Q6ZTI0 123 aa13□□□□□ -0.33
RELA-226ENST00000612991 PTH2Q96A98 100 aa13□□□□□ -0.33
RELA-226ENST00000612991 PIK3CD-AS1Q5SR53 167 aa12.99□□□□□ -0.33
RELA-226ENST00000612991 PHLDA1Q8WV24 401 aaPredicted RBP12.99□□□□□ -0.33
RELA-226ENST00000612991 CHAC1Q9BUX1 264 aa12.99□□□□□ -0.33
RELA-226ENST00000612991 EDA2RQ9HAV5 297 aa12.99□□□□□ -0.33
RELA-226ENST00000612991 K7EP13 123 aa12.99□□□□□ -0.33
RELA-226ENST00000612991 CEMP1Q6PRD7 247 aaPredicted RBP12.99□□□□□ -0.33
RELA-226ENST00000612991 IL17DQ8TAD2 202 aa12.99□□□□□ -0.33
RELA-226ENST00000612991 ORAOV1Q8WV07 137 aa12.98□□□□□ -0.33
RELA-226ENST00000612991 ZNF479Q96JC4 524 aa12.98□□□□□ -0.33
RELA-226ENST00000612991 RHODO00212 210 aa12.97□□□□□ -0.33
RELA-226ENST00000612991 NOP10Q9NPE3 64 aaKnown RBP12.97□□□□□ -0.33
RELA-226ENST00000612991 WIPF1O43516 503 aa12.97□□□□□ -0.33
RELA-226ENST00000612991 OR4C5Q8NGB2 326 aa12.97□□□□□ -0.33
RELA-226ENST00000612991 OR11H2Q8NH07 326 aa12.97□□□□□ -0.33
RELA-226ENST00000612991 ZNRF2Q8NHG8 242 aa12.97□□□□□ -0.33
RELA-226ENST00000612991 PRADC1Q9BSG0 188 aa12.97□□□□□ -0.33
RELA-226ENST00000612991 LINC01549A6NIU2 74 aa12.96□□□□□ -0.33
RELA-226ENST00000612991 TMEM263Q8WUH6 116 aaKnown RBP12.96□□□□□ -0.33
RELA-226ENST00000612991 GCSHP23434 173 aa12.96□□□□□ -0.34
RELA-226ENST00000612991 NBEAL2Q6ZNJ1 2754 aa12.95□□□□□ -0.34
RELA-226ENST00000612991 SEC11AP67812 179 aa12.95□□□□□ -0.34
RELA-226ENST00000612991 RNASE13Q5GAN3 156 aaKnown RBP12.95□□□□□ -0.34
RELA-226ENST00000612991 GAGE1Q13065 139 aa12.95□□□□□ -0.34
RELA-226ENST00000612991 TMEM170BQ5T4T1 132 aa12.95□□□□□ -0.34
RELA-226ENST00000612991 HIGD1BQ9P298 99 aa12.95□□□□□ -0.34
RELA-226ENST00000612991 IGLV4-3A0A075B6K6 122 aa12.94□□□□□ -0.34
RELA-226ENST00000612991 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.93□□□□□ -0.34
RELA-226ENST00000612991 IGKV2-29A2NJV5 120 aaPredicted RBP12.93□□□□□ -0.34
RELA-226ENST00000612991 E9PLD3 99 aa12.93□□□□□ -0.34
RELA-226ENST00000612991 FXYD2P54710 66 aa12.93□□□□□ -0.34
RELA-226ENST00000612991 CSNK1G2-AS1Q8NCQ2 148 aa12.93□□□□□ -0.34
RELA-226ENST00000612991 NAA38Q9BRA0 125 aaKnown RBP12.93□□□□□ -0.34
RELA-226ENST00000612991 PLAC8L1A1L4L8 177 aa12.93□□□□□ -0.34
RELA-226ENST00000612991 KRTAP10-11P60412 298 aa12.93□□□□□ -0.34
RELA-226ENST00000612991 FAM104AQ969W3 186 aa12.93□□□□□ -0.34
RELA-226ENST00000612991 NOTCH1P46531 2555 aa12.93□□□□□ -0.34
RELA-226ENST00000612991 MYMXA0A1B0GTQ4 84 aa12.92□□□□□ -0.34
RELA-226ENST00000612991 VAMP3Q15836 100 aa12.92□□□□□ -0.34
RELA-226ENST00000612991 RAB37Q96AX2 223 aa12.92□□□□□ -0.34
RELA-226ENST00000612991 CHCHD7Q9BUK0 85 aa12.92□□□□□ -0.34
RELA-226ENST00000612991 GAGE12BA1L429 117 aa12.91□□□□□ -0.34
RELA-226ENST00000612991 CCL25O15444 150 aa12.91□□□□□ -0.34
RELA-226ENST00000612991 GAGE7O76087 117 aa12.91□□□□□ -0.34
RELA-226ENST00000612991 GAGE12FP0CL80 117 aa12.91□□□□□ -0.34
RELA-226ENST00000612991 GAGE12GP0CL81 117 aa12.91□□□□□ -0.34
RELA-226ENST00000612991 GAGE12IP0CL82 117 aa12.91□□□□□ -0.34
RELA-226ENST00000612991 VCX2Q9H322 139 aa12.91□□□□□ -0.34
RELA-226ENST00000612991 A0A0J9YXV3 536 aa12.91□□□□□ -0.34
RELA-226ENST00000612991 A6NDN8 102 aa12.91□□□□□ -0.34
RELA-226ENST00000612991 ZNF815PA8K554 130 aa12.9□□□□□ -0.34
RELA-226ENST00000612991 G3V4G9 280 aa12.9□□□□□ -0.34
RELA-226ENST00000612991 NBEAL1Q6ZS30 2694 aa12.9□□□□□ -0.34
RELA-226ENST00000612991 TSPEAR-AS2P59090 65 aa12.9□□□□□ -0.35
RELA-226ENST00000612991 PLEKHB2Q96CS7 222 aa12.9□□□□□ -0.35
RELA-226ENST00000612991 C1QTNF4Q9BXJ3 329 aa12.9□□□□□ -0.35
RELA-226ENST00000612991 K7ERJ3 54 aa12.89□□□□□ -0.35
RELA-226ENST00000612991 PTTG1IPP53801 180 aa12.89□□□□□ -0.35
RELA-226ENST00000612991 COTL1Q14019 142 aa12.89□□□□□ -0.35
RELA-226ENST00000612991 RRN3P1Q2M238 152 aa12.89□□□□□ -0.35
RELA-226ENST00000612991 PAPPA-AS1Q5QFB9 102 aa12.89□□□□□ -0.35
RELA-226ENST00000612991 AMMECR1LQ6DCA0 310 aa12.89□□□□□ -0.35
RELA-226ENST00000612991 C16orf74Q96GX8 76 aa12.89□□□□□ -0.35
RELA-226ENST00000612991 DNAJC30Q96LL9 226 aa12.89□□□□□ -0.35
RELA-226ENST00000612991 IGHV3-64A0A075B6Q5 118 aa12.88□□□□□ -0.35
RELA-226ENST00000612991 TRGV2A0A075B6R0 118 aa12.88□□□□□ -0.35
RELA-226ENST00000612991 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
RELA-226ENST00000612991 CEND1Q8N111 149 aa12.88□□□□□ -0.35
RELA-226ENST00000612991 SLC25A29Q8N8R3 303 aa12.88□□□□□ -0.35
RELA-226ENST00000612991 HIST1H4GQ99525 98 aa12.88□□□□□ -0.35
RELA-226ENST00000612991 TRAV4A0A0B4J268 109 aa12.87□□□□□ -0.35
RELA-226ENST00000612991 HERVK_113P61574 105 aa12.87□□□□□ -0.35
RELA-226ENST00000612991 UBE2V1Q13404 147 aa12.87□□□□□ -0.35
RELA-226ENST00000612991 K7EQD1 137 aa12.87□□□□□ -0.35
RELA-226ENST00000612991 NFE4Q86UQ8 179 aa12.87□□□□□ -0.35
RELA-226ENST00000612991 UBE2D4Q9Y2X8 147 aa12.87□□□□□ -0.35
RELA-226ENST00000612991 TRBV7-3A0A075B6L6 115 aa12.86□□□□□ -0.35
RELA-226ENST00000612991 GAGE12JA6NER3 117 aa12.86□□□□□ -0.35
RELA-226ENST00000612991 EGFEM1PQ0D2K5 195 aa12.86□□□□□ -0.35
RELA-226ENST00000612991 GAGE4Q13068 117 aa12.86□□□□□ -0.35
RELA-226ENST00000612991 GAGE5Q13069 117 aa12.86□□□□□ -0.35
RELA-226ENST00000612991 GAGE13Q4V321 117 aa12.86□□□□□ -0.35
RELA-226ENST00000612991 PYGO1Q9Y3Y4 419 aa12.86□□□□□ -0.35
RELA-226ENST00000612991 H3BRM9 83 aa12.86□□□□□ -0.35
RELA-226ENST00000612991 SCGB1D4Q6XE38 83 aa12.86□□□□□ -0.35
RELA-226ENST00000612991 Q6ZUT4 128 aa12.86□□□□□ -0.35
RELA-226ENST00000612991 NHP2Q9NX24 153 aaKnown RBP12.86□□□□□ -0.35
RELA-226ENST00000612991 MGAM2Q2M2H8 2515 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms