RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GATA1P15976 413 aaPredicted RBP6.74□□□□□ -1.33
TTC28-208ENST00000612946 USP9YO00507 2555 aaPredicted RBP6.74□□□□□ -1.33
TTC28-208ENST00000612946 COL8A2P25067 703 aa6.74□□□□□ -1.33
TTC28-208ENST00000612946 LOXP28300 417 aaPredicted RBP6.74□□□□□ -1.33
TTC28-208ENST00000612946 TMEM89A2RUT3 159 aa6.74□□□□□ -1.33
TTC28-208ENST00000612946 MIR7-3HGQ8N6C7 128 aa6.74□□□□□ -1.33
TTC28-208ENST00000612946 DEFB130BP0DP73 79 aa6.74□□□□□ -1.33
TTC28-208ENST00000612946 DEFB130AP0DP74 79 aa6.74□□□□□ -1.33
TTC28-208ENST00000612946 PATE2Q6UY27 113 aa6.73□□□□□ -1.33
TTC28-208ENST00000612946 PRB3Q04118 309 aaPredicted RBP6.73□□□□□ -1.33
TTC28-208ENST00000612946 KIR2DL5BQ8NHK3 375 aa6.73□□□□□ -1.33
TTC28-208ENST00000612946 RPL39P62891 51 aaKnown RBP6.73□□□□□ -1.33
TTC28-208ENST00000612946 DEFB121Q5J5C9 76 aa6.73□□□□□ -1.33
TTC28-208ENST00000612946 GDF5OSQ5U4N7 250 aa6.73□□□□□ -1.33
TTC28-208ENST00000612946 RSPO1Q2MKA7 263 aaPredicted RBP6.73□□□□□ -1.33
TTC28-208ENST00000612946 LINC00574Q9H8X3 128 aa6.73□□□□□ -1.33
TTC28-208ENST00000612946 LINC00205P59089 165 aa6.72□□□□□ -1.33
TTC28-208ENST00000612946 PINLYPA6NC86 204 aa6.72□□□□□ -1.33
TTC28-208ENST00000612946 UBE2D1P51668 147 aa6.72□□□□□ -1.33
TTC28-208ENST00000612946 ZMAT4Q9H898 229 aa6.72□□□□□ -1.33
TTC28-208ENST00000612946 SP5Q6BEB4 398 aaPredicted RBP6.72□□□□□ -1.33
TTC28-208ENST00000612946 LINC01356Q8N9X3 169 aa6.72□□□□□ -1.33
TTC28-208ENST00000612946 TRBV27A0A0K0K1C4 114 aa6.72□□□□□ -1.33
TTC28-208ENST00000612946 CAMK2N2Q96S95 79 aa6.72□□□□□ -1.33
TTC28-208ENST00000612946 TTTY13Q9BZ97 58 aa6.72□□□□□ -1.33
TTC28-208ENST00000612946 LOXL1Q08397 574 aaPredicted RBP6.71□□□□□ -1.33
TTC28-208ENST00000612946 IGKV2D-26A0A0A0MRZ7 120 aa6.71□□□□□ -1.33
TTC28-208ENST00000612946 GNRH2O43555 120 aa6.71□□□□□ -1.33
TTC28-208ENST00000612946 CFHR3Q02985 330 aa6.71□□□□□ -1.34
TTC28-208ENST00000612946 RNASE13Q5GAN3 156 aaKnown RBP6.71□□□□□ -1.34
TTC28-208ENST00000612946 IGHV3-16A0A0C4DH30 117 aa6.71□□□□□ -1.34
TTC28-208ENST00000612946 IGLV2-14P01704 120 aa6.71□□□□□ -1.34
TTC28-208ENST00000612946 IGHV3-38A0A0C4DH36 116 aa6.71□□□□□ -1.34
TTC28-208ENST00000612946 CCKP06307 115 aa6.71□□□□□ -1.34
TTC28-208ENST00000612946 Q9HAA7 133 aa6.71□□□□□ -1.34
TTC28-208ENST00000612946 IGF2RP11717 2491 aa6.71□□□□□ -1.34
TTC28-208ENST00000612946 CTSGP08311 255 aa6.7□□□□□ -1.34
TTC28-208ENST00000612946 ZNF22P17026 224 aaPredicted RBP6.7□□□□□ -1.34
TTC28-208ENST00000612946 RPL35AP18077 110 aaKnown RBP6.7□□□□□ -1.34
TTC28-208ENST00000612946 ESM1Q9NQ30 184 aa6.7□□□□□ -1.34
TTC28-208ENST00000612946 XCL2Q9UBD3 114 aa6.7□□□□□ -1.34
TTC28-208ENST00000612946 TRBV6-5A0A0K0K1A5 114 aa6.7□□□□□ -1.34
TTC28-208ENST00000612946 IGKV4-1P06312 121 aa6.7□□□□□ -1.34
TTC28-208ENST00000612946 MSRB1Q9NZV6 116 aa6.7□□□□□ -1.34
TTC28-208ENST00000612946 DHRS4-AS1Q9P1J3 65 aa6.7□□□□□ -1.34
TTC28-208ENST00000612946 IGHV4-4A0A075B6R2 117 aa6.7□□□□□ -1.34
TTC28-208ENST00000612946 CCL24O00175 119 aa6.7□□□□□ -1.34
TTC28-208ENST00000612946 PRYO14603 147 aa6.69□□□□□ -1.34
TTC28-208ENST00000612946 RPL28P46779 137 aaKnown RBP6.69□□□□□ -1.34
TTC28-208ENST00000612946 UBE2D4Q9Y2X8 147 aa6.69□□□□□ -1.34
TTC28-208ENST00000612946 TPSG1Q9NRR2 321 aa6.69□□□□□ -1.34
TTC28-208ENST00000612946 C17orf77Q96MU5 243 aa6.68□□□□□ -1.34
TTC28-208ENST00000612946 ANKRD17O75179 2603 aaKnown RBP6.68□□□□□ -1.34
TTC28-208ENST00000612946 Q8N976 141 aa6.68□□□□□ -1.34
TTC28-208ENST00000612946 ESRGQ1W209 222 aa6.68□□□□□ -1.34
TTC28-208ENST00000612946 MYCNOSP40205 109 aa6.68□□□□□ -1.34
TTC28-208ENST00000612946 DEFB104AQ8WTQ1 72 aa6.68□□□□□ -1.34
TTC28-208ENST00000612946 COL4A5P29400 1685 aa6.68□□□□□ -1.34
TTC28-208ENST00000612946 GPHB5Q86YW7 130 aa6.68□□□□□ -1.34
TTC28-208ENST00000612946 NCR3O14931 201 aa6.68□□□□□ -1.34
TTC28-208ENST00000612946 ZNF80P51504 273 aaPredicted RBP6.68□□□□□ -1.34
TTC28-208ENST00000612946 ATP1A1-AS1Q5TC04 95 aa6.68□□□□□ -1.34
TTC28-208ENST00000612946 IGKV1OR2-108A0A075B7D4 117 aa6.68□□□□□ -1.34
TTC28-208ENST00000612946 LYPD2Q6UXB3 125 aa6.68□□□□□ -1.34
TTC28-208ENST00000612946 DEFB105AQ8NG35 78 aa6.68□□□□□ -1.34
TTC28-208ENST00000612946 IGHV4-28A0A0C4DH34 117 aa6.67□□□□□ -1.34
TTC28-208ENST00000612946 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.67□□□□□ -1.34
TTC28-208ENST00000612946 SNURFQ9Y675 71 aa6.67□□□□□ -1.34
TTC28-208ENST00000612946 WT1P19544 449 aaPredicted RBP6.67□□□□□ -1.34
TTC28-208ENST00000612946 THSD7BQ9C0I4 1608 aa6.67□□□□□ -1.34
TTC28-208ENST00000612946 IGHV4OR15-8A0A075B7B6 117 aa6.67□□□□□ -1.34
TTC28-208ENST00000612946 A0A087WW49 117 aa6.67□□□□□ -1.34
TTC28-208ENST00000612946 SPAG11BQ08648 103 aa6.67□□□□□ -1.34
TTC28-208ENST00000612946 Q8N9L7 120 aa6.67□□□□□ -1.34
TTC28-208ENST00000612946 F8WDY8 70 aa6.67□□□□□ -1.34
TTC28-208ENST00000612946 PLAC8L1A1L4L8 177 aa6.66□□□□□ -1.34
TTC28-208ENST00000612946 IGLV2-23P01705 113 aa6.66□□□□□ -1.34
TTC28-208ENST00000612946 C11orf53Q8IXP5 236 aa6.66□□□□□ -1.34
TTC28-208ENST00000612946 MAPKAPK5-AS1Q8N8E1 139 aa6.66□□□□□ -1.34
TTC28-208ENST00000612946 NOP10Q9NPE3 64 aaKnown RBP6.66□□□□□ -1.34
TTC28-208ENST00000612946 SHISA2Q6UWI4 295 aa6.66□□□□□ -1.34
TTC28-208ENST00000612946 C14orf177Q52M58 125 aa6.66□□□□□ -1.34
TTC28-208ENST00000612946 ZFAND2AQ8N6M9 145 aa6.66□□□□□ -1.34
TTC28-208ENST00000612946 H0Y9J4 135 aa6.66□□□□□ -1.34
TTC28-208ENST00000612946 C9orf85Q96MD7 179 aa6.66□□□□□ -1.34
TTC28-208ENST00000612946 B9D2Q9BPU9 175 aa6.66□□□□□ -1.34
TTC28-208ENST00000612946 GYPEP15421 78 aa6.65□□□□□ -1.34
TTC28-208ENST00000612946 IGLV4-3A0A075B6K6 122 aa6.65□□□□□ -1.34
TTC28-208ENST00000612946 MSMBP08118 114 aa6.65□□□□□ -1.34
TTC28-208ENST00000612946 Q0VFX4 171 aa6.65□□□□□ -1.34
TTC28-208ENST00000612946 RNF185Q96GF1 192 aa6.65□□□□□ -1.34
TTC28-208ENST00000612946 HOXB4P17483 251 aaPredicted RBP6.65□□□□□ -1.34
TTC28-208ENST00000612946 CDIP1Q9H305 208 aa6.65□□□□□ -1.34
TTC28-208ENST00000612946 FRMD6-AS1P0C7T7 363 aa6.65□□□□□ -1.35
TTC28-208ENST00000612946 IGFL3Q6UXB1 125 aa6.65□□□□□ -1.35
TTC28-208ENST00000612946 G3V318 75 aa6.65□□□□□ -1.35
TTC28-208ENST00000612946 A0A0G2JNJ9 132 aa6.65□□□□□ -1.35
TTC28-208ENST00000612946 Q9UFV3 132 aa6.65□□□□□ -1.35
TTC28-208ENST00000612946 A0A1B0GW54 56 aa6.65□□□□□ -1.35
TTC28-208ENST00000612946 INSL3P51460 131 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms