RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 RASL11AQ6T310 242 aa14.51□□□□□ -0.09
MMP28-203ENST00000612672 GVQW2A0A096LPI5 108 aaPredicted RBP14.5□□□□□ -0.09
MMP28-203ENST00000612672 H7C1H1 209 aa14.5□□□□□ -0.09
MMP28-203ENST00000612672 AMTP48728 403 aa14.49□□□□□ -0.09
MMP28-203ENST00000612672 FER1L6-AS1Q8NA97 138 aa14.49□□□□□ -0.09
MMP28-203ENST00000612672 CHCHD10Q8WYQ3 142 aaPredicted RBP14.49□□□□□ -0.09
MMP28-203ENST00000612672 UBE2L6O14933 153 aa14.48□□□□□ -0.09
MMP28-203ENST00000612672 CFAP161Q6P656 301 aa14.48□□□□□ -0.09
MMP28-203ENST00000612672 REG3GQ6UW15 175 aa14.48□□□□□ -0.09
MMP28-203ENST00000612672 LINC00526Q96FQ7 95 aa14.48□□□□□ -0.09
MMP28-203ENST00000612672 RPL35P42766 123 aaKnown RBP14.47□□□□□ -0.09
MMP28-203ENST00000612672 TMUB2Q71RG4 321 aa14.47□□□□□ -0.09
MMP28-203ENST00000612672 SFT2D1Q8WV19 159 aa14.47□□□□□ -0.09
MMP28-203ENST00000612672 MBD3L1Q8WWY6 194 aa14.47□□□□□ -0.09
MMP28-203ENST00000612672 NIT2Q9NQR4 276 aa14.47□□□□□ -0.09
MMP28-203ENST00000612672 FAM213BQ8TBF2 198 aa14.46□□□□□ -0.09
MMP28-203ENST00000612672 ARPC5O15511 151 aa14.45□□□□□ -0.1
MMP28-203ENST00000612672 FOXI1Q12951 378 aa14.45□□□□□ -0.1
MMP28-203ENST00000612672 COTL1Q14019 142 aa14.45□□□□□ -0.1
MMP28-203ENST00000612672 C19orf71A6NCJ1 209 aa14.44□□□□□ -0.1
MMP28-203ENST00000612672 PFDN1O60925 122 aa14.44□□□□□ -0.1
MMP28-203ENST00000612672 RGS21Q2M5E4 152 aa14.44□□□□□ -0.1
MMP28-203ENST00000612672 Q6ZNX1 250 aa14.44□□□□□ -0.1
MMP28-203ENST00000612672 OR2D3Q8NGH3 330 aa14.44□□□□□ -0.1
MMP28-203ENST00000612672 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.42□□□□□ -0.1
MMP28-203ENST00000612672 IGKV2-29A2NJV5 120 aaPredicted RBP14.42□□□□□ -0.1
MMP28-203ENST00000612672 CACNG7P62955 275 aa14.42□□□□□ -0.1
MMP28-203ENST00000612672 CENPWQ5EE01 88 aa14.42□□□□□ -0.1
MMP28-203ENST00000612672 TRAV26-2A0A0B4J265 109 aa14.41□□□□□ -0.1
MMP28-203ENST00000612672 LYZL1Q6UWQ5 148 aa14.41□□□□□ -0.1
MMP28-203ENST00000612672 Q6ZRP5 223 aa14.41□□□□□ -0.1
MMP28-203ENST00000612672 KCNRGQ8N5I3 272 aa14.41□□□□□ -0.1
MMP28-203ENST00000612672 NTF3P20783 257 aa14.4□□□□□ -0.1
MMP28-203ENST00000612672 GATD1Q8NB37 220 aa14.4□□□□□ -0.1
MMP28-203ENST00000612672 C11orf52Q96A22 123 aa14.4□□□□□ -0.1
MMP28-203ENST00000612672 SMLR1H3BR10 107 aa14.39□□□□□ -0.11
MMP28-203ENST00000612672 CCL20P78556 96 aa14.38□□□□□ -0.11
MMP28-203ENST00000612672 RPL39LQ96EH5 51 aaKnown RBP14.38□□□□□ -0.11
MMP28-203ENST00000612672 RAB19A4D1S5 217 aa14.37□□□□□ -0.11
MMP28-203ENST00000612672 TRGC1P0CF51 173 aa14.37□□□□□ -0.11
MMP28-203ENST00000612672 RPS20P60866 119 aaKnown RBP14.37□□□□□ -0.11
MMP28-203ENST00000612672 RNASEKQ6P5S7 137 aaKnown RBP14.37□□□□□ -0.11
MMP28-203ENST00000612672 CARD19Q96LW7 228 aa14.37□□□□□ -0.11
MMP28-203ENST00000612672 FGF6P10767 208 aa14.36□□□□□ -0.11
MMP28-203ENST00000612672 XCL1P47992 114 aa14.36□□□□□ -0.11
MMP28-203ENST00000612672 AMMECR1LQ6DCA0 310 aa14.36□□□□□ -0.11
MMP28-203ENST00000612672 LINC00474Q9P2X8 69 aa14.36□□□□□ -0.11
MMP28-203ENST00000612672 TRBV20OR9-2A0A075B6H5 130 aa14.34□□□□□ -0.11
MMP28-203ENST00000612672 A0A1W2PNN7 141 aa14.34□□□□□ -0.11
MMP28-203ENST00000612672 F2Z2F3 143 aa14.34□□□□□ -0.11
MMP28-203ENST00000612672 CTRLP40313 264 aa14.34□□□□□ -0.11
MMP28-203ENST00000612672 CCL25O15444 150 aa14.33□□□□□ -0.12
MMP28-203ENST00000612672 H2AFB1P0C5Y9 115 aa14.33□□□□□ -0.12
MMP28-203ENST00000612672 UMAD1C9J7I0 102 aa14.32□□□□□ -0.12
MMP28-203ENST00000612672 PTTG1IPP53801 180 aa14.32□□□□□ -0.12
MMP28-203ENST00000612672 FOXA3P55318 350 aaPredicted RBP14.32□□□□□ -0.12
MMP28-203ENST00000612672 OR5A1Q8NGJ0 315 aa14.32□□□□□ -0.12
MMP28-203ENST00000612672 GNG13Q9P2W3 67 aa14.32□□□□□ -0.12
MMP28-203ENST00000612672 IGHV1-58A0A0C4DH39 117 aa14.31□□□□□ -0.12
MMP28-203ENST00000612672 LINC00959A0A1B0GUT2 108 aa14.31□□□□□ -0.12
MMP28-203ENST00000612672 FAM231BA6NCW3 169 aa14.31□□□□□ -0.12
MMP28-203ENST00000612672 IFNA1P01562 189 aa14.31□□□□□ -0.12
MMP28-203ENST00000612672 APCSP02743 223 aa14.31□□□□□ -0.12
MMP28-203ENST00000612672 C9orf62Q8N4C0 152 aa14.31□□□□□ -0.12
MMP28-203ENST00000612672 PSORS1C2Q9UIG4 136 aa14.31□□□□□ -0.12
MMP28-203ENST00000612672 CNFNQ9BYD5 112 aa14.3□□□□□ -0.12
MMP28-203ENST00000612672 NCR2O95944 276 aa14.29□□□□□ -0.12
MMP28-203ENST00000612672 SYCNQ0VAF6 134 aa14.29□□□□□ -0.12
MMP28-203ENST00000612672 H7C423 109 aa14.28□□□□□ -0.12
MMP28-203ENST00000612672 GNG4P50150 75 aa14.28□□□□□ -0.12
MMP28-203ENST00000612672 GAGE2BQ13066 116 aa14.28□□□□□ -0.12
MMP28-203ENST00000612672 TWIST1Q15672 202 aa14.28□□□□□ -0.12
MMP28-203ENST00000612672 MANBALQ9NQG1 85 aa14.28□□□□□ -0.12
MMP28-203ENST00000612672 ZNF345Q14585 488 aa14.27□□□□□ -0.13
MMP28-203ENST00000612672 NUDT10Q8NFP7 164 aa14.27□□□□□ -0.13
MMP28-203ENST00000612672 NUDT11Q96G61 164 aa14.27□□□□□ -0.13
MMP28-203ENST00000612672 FAT4Q6V0I7 4981 aa14.26□□□□□ -0.13
MMP28-203ENST00000612672 XKRY2A2RUG3 117 aa14.26□□□□□ -0.13
MMP28-203ENST00000612672 SDHAF1A6NFY7 115 aa14.26□□□□□ -0.13
MMP28-203ENST00000612672 BCL2P10415 239 aa14.26□□□□□ -0.13
MMP28-203ENST00000612672 PRR26Q8N8Z3 221 aa14.26□□□□□ -0.13
MMP28-203ENST00000612672 ZNF25P17030 456 aaPredicted RBP14.25□□□□□ -0.13
MMP28-203ENST00000612672 SMIM12Q96EX1 92 aa14.25□□□□□ -0.13
MMP28-203ENST00000612672 PKIGQ9Y2B9 76 aa14.25□□□□□ -0.13
MMP28-203ENST00000612672 ESDP10768 282 aa14.24□□□□□ -0.13
MMP28-203ENST00000612672 CAMPP49913 170 aa14.24□□□□□ -0.13
MMP28-203ENST00000612672 KRTAP9-2Q9BYQ4 174 aa14.24□□□□□ -0.13
MMP28-203ENST00000612672 IGLV4-69A0A075B6H9 119 aa14.23□□□□□ -0.13
MMP28-203ENST00000612672 LOC107984640A0A0U1RRK4 108 aa14.23□□□□□ -0.13
MMP28-203ENST00000612672 BCL2L11O43521 198 aa14.23□□□□□ -0.13
MMP28-203ENST00000612672 TSHBP01222 138 aa14.23□□□□□ -0.13
MMP28-203ENST00000612672 PHF5AQ7RTV0 110 aaKnown RBP14.23□□□□□ -0.13
MMP28-203ENST00000612672 ZNF561-AS1K7EIQ3 104 aa14.22□□□□□ -0.13
MMP28-203ENST00000612672 C9orf116Q5BN46 136 aaPredicted RBP14.22□□□□□ -0.13
MMP28-203ENST00000612672 CD164L2Q6UWJ8 174 aa14.22□□□□□ -0.13
MMP28-203ENST00000612672 RNASE7Q9H1E1 156 aaKnown RBP14.22□□□□□ -0.13
MMP28-203ENST00000612672 K7EN84 100 aa14.21□□□□□ -0.13
MMP28-203ENST00000612672 MT-ND6P03923 174 aa14.21□□□□□ -0.13
MMP28-203ENST00000612672 C1orf137Q5JT78 98 aa14.21□□□□□ -0.13
MMP28-203ENST00000612672 NUP35Q8NFH5 326 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms