RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 Q6ZSN1 163 aa12.55□□□□□ -0.4
NEK3-206ENST00000611833 INSP01308 110 aa12.54□□□□□ -0.4
NEK3-206ENST00000611833 Q6ZSV7 163 aa12.54□□□□□ -0.4
NEK3-206ENST00000611833 SPXQ9BT56 116 aa12.54□□□□□ -0.4
NEK3-206ENST00000611833 Q9UF83 564 aa12.54□□□□□ -0.4
NEK3-206ENST00000611833 AKAP9Q99996 3911 aa12.54□□□□□ -0.4
NEK3-206ENST00000611833 LYRM7Q5U5X0 104 aa12.54□□□□□ -0.4
NEK3-206ENST00000611833 TLN2Q9Y4G6 2542 aa12.54□□□□□ -0.4
NEK3-206ENST00000611833 NBPF19A0A087WUL8 3843 aa12.53□□□□□ -0.4
NEK3-206ENST00000611833 WFDC11Q8NEX6 87 aa12.53□□□□□ -0.4
NEK3-206ENST00000611833 RNASE13Q5GAN3 156 aaKnown RBP12.53□□□□□ -0.4
NEK3-206ENST00000611833 C11orf72Q8NBR9 251 aa12.53□□□□□ -0.4
NEK3-206ENST00000611833 PTH2Q96A98 100 aa12.53□□□□□ -0.4
NEK3-206ENST00000611833 UBE2D3P61077 147 aa12.52□□□□□ -0.41
NEK3-206ENST00000611833 UBE2D2P62837 147 aa12.52□□□□□ -0.41
NEK3-206ENST00000611833 NACAE9PAV3 2078 aa12.52□□□□□ -0.41
NEK3-206ENST00000611833 EPG5Q9HCE0 2579 aa12.52□□□□□ -0.41
NEK3-206ENST00000611833 ITPR3Q14573 2671 aa12.52□□□□□ -0.41
NEK3-206ENST00000611833 CRYBA4P53673 196 aa12.51□□□□□ -0.41
NEK3-206ENST00000611833 C10orf126Q8N4M7 172 aa12.51□□□□□ -0.41
NEK3-206ENST00000611833 TMEM86BQ8N661 226 aa12.51□□□□□ -0.41
NEK3-206ENST00000611833 LINC00467Q9BRT7 94 aa12.51□□□□□ -0.41
NEK3-206ENST00000611833 TIMM21Q9BVV7 248 aa12.51□□□□□ -0.41
NEK3-206ENST00000611833 PRO1854Q9UHT4 67 aa12.51□□□□□ -0.41
NEK3-206ENST00000611833 MRPS36P82909 103 aaKnown RBP12.51□□□□□ -0.41
NEK3-206ENST00000611833 FAM104AQ969W3 186 aa12.51□□□□□ -0.41
NEK3-206ENST00000611833 A4D1N5 150 aa12.5□□□□□ -0.41
NEK3-206ENST00000611833 DNAJC9-AS1A6NH13 148 aa12.5□□□□□ -0.41
NEK3-206ENST00000611833 C11orf44Q8N8P7 122 aa12.5□□□□□ -0.41
NEK3-206ENST00000611833 CHCHD7Q9BUK0 85 aa12.5□□□□□ -0.41
NEK3-206ENST00000611833 XCL2Q9UBD3 114 aa12.5□□□□□ -0.41
NEK3-206ENST00000611833 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.5□□□□□ -0.41
NEK3-206ENST00000611833 IGKV2-29A2NJV5 120 aaPredicted RBP12.5□□□□□ -0.41
NEK3-206ENST00000611833 TMEM238C9JI98 176 aa12.5□□□□□ -0.41
NEK3-206ENST00000611833 IGHV3-30-3P0DP02 117 aa12.5□□□□□ -0.41
NEK3-206ENST00000611833 CUBNO60494 3623 aa12.49□□□□□ -0.41
NEK3-206ENST00000611833 IGHV3-38A0A0C4DH36 116 aa12.49□□□□□ -0.41
NEK3-206ENST00000611833 A0A1W2PRX2 142 aa12.49□□□□□ -0.41
NEK3-206ENST00000611833 IGHV3-53P01767 116 aa12.49□□□□□ -0.41
NEK3-206ENST00000611833 DNAJC30Q96LL9 226 aa12.49□□□□□ -0.41
NEK3-206ENST00000611833 SPANXA1Q9NS26 97 aa12.49□□□□□ -0.41
NEK3-206ENST00000611833 SONP18583 2426 aaKnown RBP12.49□□□□□ -0.41
NEK3-206ENST00000611833 IGHV3OR16-12A0A075B7B8 117 aa12.49□□□□□ -0.41
NEK3-206ENST00000611833 SCGB1C2P0DMR2 95 aa12.49□□□□□ -0.41
NEK3-206ENST00000611833 BEAN1Q3B7T3 259 aa12.49□□□□□ -0.41
NEK3-206ENST00000611833 MUSTN1Q8IVN3 82 aa12.49□□□□□ -0.41
NEK3-206ENST00000611833 STHQ8IWL8 128 aa12.49□□□□□ -0.41
NEK3-206ENST00000611833 ZNF418Q8TF45 676 aaPredicted RBP12.49□□□□□ -0.41
NEK3-206ENST00000611833 UBE2D4Q9Y2X8 147 aa12.49□□□□□ -0.41
NEK3-206ENST00000611833 TSSC4Q9Y5U2 329 aaPredicted RBP12.49□□□□□ -0.41
NEK3-206ENST00000611833 CHD6Q8TD26 2715 aa12.48□□□□□ -0.41
NEK3-206ENST00000611833 TRAV8-3A0A0A6YYJ7 113 aa12.48□□□□□ -0.41
NEK3-206ENST00000611833 A0A0J9YXY3 114 aa12.48□□□□□ -0.41
NEK3-206ENST00000611833 ADARB2-AS1A8MUL3 147 aa12.48□□□□□ -0.41
NEK3-206ENST00000611833 ODF3L2Q3SX64 289 aa12.48□□□□□ -0.41
NEK3-206ENST00000611833 ESM1Q9NQ30 184 aa12.48□□□□□ -0.41
NEK3-206ENST00000611833 RS1O15537 224 aa12.47□□□□□ -0.41
NEK3-206ENST00000611833 AZU1P20160 251 aa12.47□□□□□ -0.41
NEK3-206ENST00000611833 TRBV20-1A0A075B6N2 111 aa12.46□□□□□ -0.41
NEK3-206ENST00000611833 TCL1BO95988 128 aa12.46□□□□□ -0.41
NEK3-206ENST00000611833 SMCPP49901 116 aaPredicted RBP12.46□□□□□ -0.41
NEK3-206ENST00000611833 HIST2H2BCQ6DN03 193 aa12.46□□□□□ -0.41
NEK3-206ENST00000611833 TRAV25A0A0B4J276 109 aa12.46□□□□□ -0.41
NEK3-206ENST00000611833 IGHV1-58A0A0C4DH39 117 aa12.46□□□□□ -0.41
NEK3-206ENST00000611833 TINCRA0A1B0GVN0 87 aa12.46□□□□□ -0.41
NEK3-206ENST00000611833 INSL3P51460 131 aa12.46□□□□□ -0.41
NEK3-206ENST00000611833 TEX29Q8N6K0 151 aa12.46□□□□□ -0.41
NEK3-206ENST00000611833 NF1P21359 2839 aa12.45□□□□□ -0.42
NEK3-206ENST00000611833 GAGE12HA6NDE8 117 aa12.45□□□□□ -0.42
NEK3-206ENST00000611833 FHL3Q13643 280 aa12.45□□□□□ -0.42
NEK3-206ENST00000611833 Q6ZUT4 128 aa12.45□□□□□ -0.42
NEK3-206ENST00000611833 CLUHP3Q96NS8 147 aa12.45□□□□□ -0.42
NEK3-206ENST00000611833 C1QTNF4Q9BXJ3 329 aa12.45□□□□□ -0.42
NEK3-206ENST00000611833 H7C2G1 150 aa12.44□□□□□ -0.42
NEK3-206ENST00000611833 CCL24O00175 119 aa12.44□□□□□ -0.42
NEK3-206ENST00000611833 TMEM263Q8WUH6 116 aaKnown RBP12.44□□□□□ -0.42
NEK3-206ENST00000611833 SIGMAR1Q99720 223 aa12.44□□□□□ -0.42
NEK3-206ENST00000611833 ERG28Q9UKR5 140 aa12.44□□□□□ -0.42
NEK3-206ENST00000611833 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.44□□□□□ -0.42
NEK3-206ENST00000611833 GTSF1LQ9H1H1 148 aa12.44□□□□□ -0.42
NEK3-206ENST00000611833 GEMIN7Q9H840 131 aaKnown RBP12.44□□□□□ -0.42
NEK3-206ENST00000611833 NDUFA12Q9UI09 145 aa12.44□□□□□ -0.42
NEK3-206ENST00000611833 TRGV1A0A0A0MS02 117 aa12.43□□□□□ -0.42
NEK3-206ENST00000611833 A0A0B4J2C4 111 aa12.43□□□□□ -0.42
NEK3-206ENST00000611833 SPINK8P0C7L1 97 aa12.43□□□□□ -0.42
NEK3-206ENST00000611833 C1orf158Q8N1D5 194 aa12.43□□□□□ -0.42
NEK3-206ENST00000611833 FLNAP21333 2647 aaKnown RBP12.43□□□□□ -0.42
NEK3-206ENST00000611833 IGHV3-33P01772 117 aa12.43□□□□□ -0.42
NEK3-206ENST00000611833 PRSS2P07478 247 aa12.43□□□□□ -0.42
NEK3-206ENST00000611833 FOXI1Q12951 378 aa12.43□□□□□ -0.42
NEK3-206ENST00000611833 DGAT2L7PQ6IED9 249 aa12.43□□□□□ -0.42
NEK3-206ENST00000611833 ATP6V0E2Q8NHE4 81 aa12.43□□□□□ -0.42
NEK3-206ENST00000611833 VSIG2Q96IQ7 327 aa12.43□□□□□ -0.42
NEK3-206ENST00000611833 TENM4Q6N022 2769 aa12.42□□□□□ -0.42
NEK3-206ENST00000611833 EIF4EBP3O60516 100 aaPredicted RBP12.42□□□□□ -0.42
NEK3-206ENST00000611833 WNK1Q9H4A3 2382 aa12.41□□□□□ -0.42
NEK3-206ENST00000611833 A8MZ25 164 aa12.41□□□□□ -0.42
NEK3-206ENST00000611833 Q1RN00 199 aa12.41□□□□□ -0.42
NEK3-206ENST00000611833 CITED2Q99967 270 aaPredicted RBP12.4□□□□□ -0.42
NEK3-206ENST00000611833 SPATA25Q9BR10 227 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms