RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 TRGC1P0CF51 173 aa9.93□□□□□ -0.82
HDDC2-203ENST00000608284 HIGD2BQ4VC39 106 aa9.93□□□□□ -0.82
HDDC2-203ENST00000608284 AMMECR1LQ6DCA0 310 aa9.93□□□□□ -0.82
HDDC2-203ENST00000608284 FER1L6-AS1Q8NA97 138 aa9.93□□□□□ -0.82
HDDC2-203ENST00000608284 PRSS3P2Q8NHM4 247 aa9.93□□□□□ -0.82
HDDC2-203ENST00000608284 GFRA4Q9GZZ7 299 aa9.92□□□□□ -0.82
HDDC2-203ENST00000608284 F2Z2F3 143 aa9.91□□□□□ -0.82
HDDC2-203ENST00000608284 KCNRGQ8N5I3 272 aa9.91□□□□□ -0.82
HDDC2-203ENST00000608284 C15orf56Q8N910 161 aa9.91□□□□□ -0.82
HDDC2-203ENST00000608284 OR2D3Q8NGH3 330 aa9.91□□□□□ -0.82
HDDC2-203ENST00000608284 A0A1B0GV50 99 aa9.9□□□□□ -0.82
HDDC2-203ENST00000608284 UMAD1C9J7I0 102 aa9.9□□□□□ -0.82
HDDC2-203ENST00000608284 KRTAP10-8P60410 259 aa9.9□□□□□ -0.82
HDDC2-203ENST00000608284 FAM213BQ8TBF2 198 aa9.9□□□□□ -0.82
HDDC2-203ENST00000608284 RPL35P42766 123 aaKnown RBP9.89□□□□□ -0.83
HDDC2-203ENST00000608284 RNASEKQ6P5S7 137 aaKnown RBP9.89□□□□□ -0.83
HDDC2-203ENST00000608284 Q6ZRP5 223 aa9.89□□□□□ -0.83
HDDC2-203ENST00000608284 MBD3L1Q8WWY6 194 aa9.89□□□□□ -0.83
HDDC2-203ENST00000608284 CHCHD10Q8WYQ3 142 aaPredicted RBP9.89□□□□□ -0.83
HDDC2-203ENST00000608284 ARPC5O15511 151 aa9.88□□□□□ -0.83
HDDC2-203ENST00000608284 GVQW2A0A096LPI5 108 aaPredicted RBP9.87□□□□□ -0.83
HDDC2-203ENST00000608284 GAS8-AS1O95177 125 aa9.87□□□□□ -0.83
HDDC2-203ENST00000608284 IFNA1P01562 189 aa9.87□□□□□ -0.83
HDDC2-203ENST00000608284 IGLC6P0CF74 106 aa9.87□□□□□ -0.83
HDDC2-203ENST00000608284 ODF1Q14990 250 aa9.87□□□□□ -0.83
HDDC2-203ENST00000608284 A0A096LNI7 61 aa9.86□□□□□ -0.83
HDDC2-203ENST00000608284 H7C423 109 aa9.86□□□□□ -0.83
HDDC2-203ENST00000608284 H2AFB1P0C5Y9 115 aa9.86□□□□□ -0.83
HDDC2-203ENST00000608284 BIN3Q9NQY0 253 aa9.86□□□□□ -0.83
HDDC2-203ENST00000608284 CYTL1Q9NRR1 136 aa9.86□□□□□ -0.83
HDDC2-203ENST00000608284 FAM231BA6NCW3 169 aa9.85□□□□□ -0.83
HDDC2-203ENST00000608284 NTF3P20783 257 aa9.85□□□□□ -0.83
HDDC2-203ENST00000608284 SMIM15Q7Z3B0 74 aa9.85□□□□□ -0.83
HDDC2-203ENST00000608284 TMEM101Q96IK0 257 aa9.85□□□□□ -0.83
HDDC2-203ENST00000608284 BTF3L4Q96K17 158 aa9.85□□□□□ -0.83
HDDC2-203ENST00000608284 ZNF561-AS1K7EIQ3 104 aa9.84□□□□□ -0.83
HDDC2-203ENST00000608284 NCR2O95944 276 aa9.84□□□□□ -0.83
HDDC2-203ENST00000608284 TWIST1Q15672 202 aa9.84□□□□□ -0.83
HDDC2-203ENST00000608284 LYZL1Q6UWQ5 148 aa9.84□□□□□ -0.83
HDDC2-203ENST00000608284 CARD19Q96LW7 228 aa9.84□□□□□ -0.83
HDDC2-203ENST00000608284 IGHV1-58A0A0C4DH39 117 aa9.83□□□□□ -0.84
HDDC2-203ENST00000608284 APCSP02743 223 aa9.83□□□□□ -0.84
HDDC2-203ENST00000608284 GNG4P50150 75 aa9.83□□□□□ -0.84
HDDC2-203ENST00000608284 SRSF9Q13242 221 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDDC2-203ENST00000608284 CENPWQ5EE01 88 aa9.83□□□□□ -0.84
HDDC2-203ENST00000608284 MANBALQ9NQG1 85 aa9.83□□□□□ -0.84
HDDC2-203ENST00000608284 TEX46H3BTG2 121 aa9.82□□□□□ -0.84
HDDC2-203ENST00000608284 XCL1P47992 114 aa9.82□□□□□ -0.84
HDDC2-203ENST00000608284 EIF5AP63241 154 aaKnown RBP9.82□□□□□ -0.84
HDDC2-203ENST00000608284 SMIM12Q96EX1 92 aa9.82□□□□□ -0.84
HDDC2-203ENST00000608284 GNG13Q9P2W3 67 aa9.82□□□□□ -0.84
HDDC2-203ENST00000608284 FGF6P10767 208 aa9.81□□□□□ -0.84
HDDC2-203ENST00000608284 ZNF25P17030 456 aaPredicted RBP9.81□□□□□ -0.84
HDDC2-203ENST00000608284 FOXI1Q12951 378 aa9.81□□□□□ -0.84
HDDC2-203ENST00000608284 LCE2DQ5TA82 110 aaPredicted RBP9.81□□□□□ -0.84
HDDC2-203ENST00000608284 TEX261Q6UWH6 196 aa9.81□□□□□ -0.84
HDDC2-203ENST00000608284 OR5A1Q8NGJ0 315 aa9.81□□□□□ -0.84
HDDC2-203ENST00000608284 ISOC2Q96AB3 205 aa9.81□□□□□ -0.84
HDDC2-203ENST00000608284 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.8□□□□□ -0.84
HDDC2-203ENST00000608284 IGKV2-29A2NJV5 120 aaPredicted RBP9.8□□□□□ -0.84
HDDC2-203ENST00000608284 C19orf71A6NCJ1 209 aa9.8□□□□□ -0.84
HDDC2-203ENST00000608284 SYCNQ0VAF6 134 aa9.8□□□□□ -0.84
HDDC2-203ENST00000608284 SS18Q15532 418 aa9.8□□□□□ -0.84
HDDC2-203ENST00000608284 C9orf62Q8N4C0 152 aa9.8□□□□□ -0.84
HDDC2-203ENST00000608284 KANTRA0A1W2PQU2 76 aa9.79□□□□□ -0.84
HDDC2-203ENST00000608284 PMCHP20382 165 aa9.79□□□□□ -0.84
HDDC2-203ENST00000608284 CCL20P78556 96 aa9.79□□□□□ -0.84
HDDC2-203ENST00000608284 ZNF664Q8N3J9 261 aa9.79□□□□□ -0.84
HDDC2-203ENST00000608284 GATD1Q8NB37 220 aa9.79□□□□□ -0.84
HDDC2-203ENST00000608284 C11orf52Q96A22 123 aa9.79□□□□□ -0.84
HDDC2-203ENST00000608284 LOC107984640A0A0U1RRK4 108 aa9.78□□□□□ -0.84
HDDC2-203ENST00000608284 CCL25O15444 150 aa9.78□□□□□ -0.84
HDDC2-203ENST00000608284 MT-ND6P03923 174 aa9.78□□□□□ -0.84
HDDC2-203ENST00000608284 GAGE2BQ13066 116 aa9.78□□□□□ -0.84
HDDC2-203ENST00000608284 Q6ZNX1 250 aa9.78□□□□□ -0.84
HDDC2-203ENST00000608284 TRAV26-2A0A0B4J265 109 aa9.77□□□□□ -0.85
HDDC2-203ENST00000608284 LINC00959A0A1B0GUT2 108 aa9.77□□□□□ -0.85
HDDC2-203ENST00000608284 RAB19A4D1S5 217 aa9.77□□□□□ -0.85
HDDC2-203ENST00000608284 I3L3M4 83 aa9.77□□□□□ -0.85
HDDC2-203ENST00000608284 PDE6DO43924 150 aa9.77□□□□□ -0.85
HDDC2-203ENST00000608284 MALP21145 153 aa9.77□□□□□ -0.85
HDDC2-203ENST00000608284 ZNF345Q14585 488 aa9.77□□□□□ -0.85
HDDC2-203ENST00000608284 EIF5AL1Q6IS14 154 aaKnown RBP9.77□□□□□ -0.85
HDDC2-203ENST00000608284 LINC00526Q96FQ7 95 aa9.77□□□□□ -0.85
HDDC2-203ENST00000608284 MED9Q9NWA0 146 aa9.77□□□□□ -0.85
HDDC2-203ENST00000608284 SDHAF1A6NFY7 115 aa9.76□□□□□ -0.85
HDDC2-203ENST00000608284 PTTG1IPP53801 180 aa9.76□□□□□ -0.85
HDDC2-203ENST00000608284 PSORS1C2Q9UIG4 136 aa9.76□□□□□ -0.85
HDDC2-203ENST00000608284 CTRLP40313 264 aa9.75□□□□□ -0.85
HDDC2-203ENST00000608284 CAMPP49913 170 aa9.75□□□□□ -0.85
HDDC2-203ENST00000608284 CD164L2Q6UWJ8 174 aa9.75□□□□□ -0.85
HDDC2-203ENST00000608284 RPL39LQ96EH5 51 aaKnown RBP9.75□□□□□ -0.85
HDDC2-203ENST00000608284 FAM210AQ96ND0 272 aa9.75□□□□□ -0.85
HDDC2-203ENST00000608284 G3V3Q6 166 aa9.74□□□□□ -0.85
HDDC2-203ENST00000608284 NUDT10Q8NFP7 164 aa9.74□□□□□ -0.85
HDDC2-203ENST00000608284 MRAP2Q96G30 205 aa9.74□□□□□ -0.85
HDDC2-203ENST00000608284 NUDT11Q96G61 164 aa9.74□□□□□ -0.85
HDDC2-203ENST00000608284 IGLV4-69A0A075B6H9 119 aa9.73□□□□□ -0.85
HDDC2-203ENST00000608284 BCL2L11O43521 198 aa9.73□□□□□ -0.85
HDDC2-203ENST00000608284 CNFNQ9BYD5 112 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms