RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 SMIM7Q9BQ49 75 aa11.81□□□□□ -0.52
CCDC12-208ENST00000603885 NDUFS6O75380 124 aaKnown RBP11.8□□□□□ -0.52
CCDC12-208ENST00000603885 AMTP48728 403 aa11.8□□□□□ -0.52
CCDC12-208ENST00000603885 CT83Q5H943 113 aa11.8□□□□□ -0.52
CCDC12-208ENST00000603885 SCXQ7RTU7 201 aa11.8□□□□□ -0.52
CCDC12-208ENST00000603885 C20orf203Q8NBC4 194 aa11.8□□□□□ -0.52
CCDC12-208ENST00000603885 DEFB104AQ8WTQ1 72 aa11.8□□□□□ -0.52
CCDC12-208ENST00000603885 FAM210AQ96ND0 272 aa11.8□□□□□ -0.52
CCDC12-208ENST00000603885 DMBT1Q9UGM3 2413 aaPredicted RBP11.8□□□□□ -0.52
CCDC12-208ENST00000603885 KRTAP26-1Q6PEX3 210 aa11.79□□□□□ -0.52
CCDC12-208ENST00000603885 TEX261Q6UWH6 196 aa11.79□□□□□ -0.52
CCDC12-208ENST00000603885 LINC00528Q8N1L1 170 aa11.79□□□□□ -0.52
CCDC12-208ENST00000603885 FLG2Q5D862 2391 aaPredicted RBP11.79□□□□□ -0.52
CCDC12-208ENST00000603885 MYCBP2O75592 4640 aa11.79□□□□□ -0.52
CCDC12-208ENST00000603885 IGLV4-60A0A075B6I1 120 aa11.78□□□□□ -0.52
CCDC12-208ENST00000603885 IGLV10-54A0A075B6I4 117 aa11.78□□□□□ -0.52
CCDC12-208ENST00000603885 TRAV8-4A0A0B4J246 113 aa11.78□□□□□ -0.52
CCDC12-208ENST00000603885 PLA2G1BP04054 148 aaKnown RBP11.78□□□□□ -0.52
CCDC12-208ENST00000603885 BORCS7Q96B45 105 aa11.78□□□□□ -0.52
CCDC12-208ENST00000603885 CHAC1Q9BUX1 264 aa11.78□□□□□ -0.52
CCDC12-208ENST00000603885 A0A1B0GVG6 124 aa11.77□□□□□ -0.53
CCDC12-208ENST00000603885 ZNF727A8MUV8 499 aa11.77□□□□□ -0.53
CCDC12-208ENST00000603885 PRSS1P07477 247 aa11.77□□□□□ -0.53
CCDC12-208ENST00000603885 FOXA3P55318 350 aaPredicted RBP11.77□□□□□ -0.53
CCDC12-208ENST00000603885 LINC01551Q86U37 167 aa11.77□□□□□ -0.53
CCDC12-208ENST00000603885 RPL39LQ96EH5 51 aaKnown RBP11.77□□□□□ -0.53
CCDC12-208ENST00000603885 DGAT2L7PQ6IED9 249 aa11.76□□□□□ -0.53
CCDC12-208ENST00000603885 GFRA4Q9GZZ7 299 aa11.76□□□□□ -0.53
CCDC12-208ENST00000603885 NCR2O95944 276 aa11.75□□□□□ -0.53
CCDC12-208ENST00000603885 SRP19P09132 144 aaKnown RBP11.75□□□□□ -0.53
CCDC12-208ENST00000603885 TSKUQ8WUA8 353 aa11.75□□□□□ -0.53
CCDC12-208ENST00000603885 HERC1Q15751 4861 aa11.74□□□□□ -0.53
CCDC12-208ENST00000603885 SDHAF1A6NFY7 115 aa11.74□□□□□ -0.53
CCDC12-208ENST00000603885 HIGD1CA8MV81 97 aa11.74□□□□□ -0.53
CCDC12-208ENST00000603885 CLRN3Q8NCR9 226 aa11.74□□□□□ -0.53
CCDC12-208ENST00000603885 OSTCQ9NRP0 149 aa11.74□□□□□ -0.53
CCDC12-208ENST00000603885 A0A1B0GUT8 65 aa11.73□□□□□ -0.53
CCDC12-208ENST00000603885 FAM231BA6NCW3 169 aa11.73□□□□□ -0.53
CCDC12-208ENST00000603885 APCSP02743 223 aa11.73□□□□□ -0.53
CCDC12-208ENST00000603885 CIRBP-AS1Q8TBR5 109 aa11.73□□□□□ -0.53
CCDC12-208ENST00000603885 AMMECR1LQ6DCA0 310 aa11.72□□□□□ -0.53
CCDC12-208ENST00000603885 C9orf163Q8N9P6 203 aa11.72□□□□□ -0.53
CCDC12-208ENST00000603885 TRBV6-5A0A0K0K1A5 114 aa11.71□□□□□ -0.53
CCDC12-208ENST00000603885 H7C423 109 aa11.71□□□□□ -0.53
CCDC12-208ENST00000603885 TMEM191AQ9H0A3 160 aa11.71□□□□□ -0.53
CCDC12-208ENST00000603885 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.7□□□□□ -0.54
CCDC12-208ENST00000603885 hDV102S1A0JD36 115 aa11.7□□□□□ -0.54
CCDC12-208ENST00000603885 IGKV2-29A2NJV5 120 aaPredicted RBP11.7□□□□□ -0.54
CCDC12-208ENST00000603885 I3L3M4 83 aa11.7□□□□□ -0.54
CCDC12-208ENST00000603885 PMCHP20382 165 aa11.7□□□□□ -0.54
CCDC12-208ENST00000603885 FAM74A3Q4VXF1 159 aa11.7□□□□□ -0.54
CCDC12-208ENST00000603885 RNASEKQ6P5S7 137 aaKnown RBP11.7□□□□□ -0.54
CCDC12-208ENST00000603885 IGKV3OR2-268A0A0C4DH90 116 aa11.69□□□□□ -0.54
CCDC12-208ENST00000603885 CNBPP62633 177 aaKnown RBP11.69□□□□□ -0.54
CCDC12-208ENST00000603885 TMEM241Q24JQ0 296 aa11.69□□□□□ -0.54
CCDC12-208ENST00000603885 ST20Q9HBF5 79 aa11.69□□□□□ -0.54
CCDC12-208ENST00000603885 AP5S1Q9NUS5 200 aa11.69□□□□□ -0.54
CCDC12-208ENST00000603885 V9GYV3 84 aa11.69□□□□□ -0.54
CCDC12-208ENST00000603885 FGF6P10767 208 aa11.68□□□□□ -0.54
CCDC12-208ENST00000603885 ISOC2Q96AB3 205 aa11.68□□□□□ -0.54
CCDC12-208ENST00000603885 GAGE12HA6NDE8 117 aa11.67□□□□□ -0.54
CCDC12-208ENST00000603885 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
CCDC12-208ENST00000603885 RAB4AP20338 218 aa11.67□□□□□ -0.54
CCDC12-208ENST00000603885 RIGQ13278 110 aa11.67□□□□□ -0.54
CCDC12-208ENST00000603885 NUP35Q8NFH5 326 aa11.67□□□□□ -0.54
CCDC12-208ENST00000603885 MRAP2Q96G30 205 aa11.67□□□□□ -0.54
CCDC12-208ENST00000603885 RNF185Q96GF1 192 aa11.67□□□□□ -0.54
CCDC12-208ENST00000603885 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.66□□□□□ -0.54
CCDC12-208ENST00000603885 ZNF25P17030 456 aaPredicted RBP11.66□□□□□ -0.54
CCDC12-208ENST00000603885 RPL23P62829 140 aaKnown RBP11.66□□□□□ -0.54
CCDC12-208ENST00000603885 ADIRFQ15847 76 aa11.66□□□□□ -0.54
CCDC12-208ENST00000603885 AMN1Q8IY45 258 aa11.66□□□□□ -0.54
CCDC12-208ENST00000603885 NAT8Q9UHE5 227 aa11.66□□□□□ -0.54
CCDC12-208ENST00000603885 TSHBP01222 138 aa11.65□□□□□ -0.54
CCDC12-208ENST00000603885 PEA15Q15121 130 aa11.65□□□□□ -0.54
CCDC12-208ENST00000603885 CFAP161Q6P656 301 aa11.65□□□□□ -0.54
CCDC12-208ENST00000603885 SDIM1Q6ZPB5 146 aa11.65□□□□□ -0.54
CCDC12-208ENST00000603885 CHCHD10Q8WYQ3 142 aaPredicted RBP11.65□□□□□ -0.54
CCDC12-208ENST00000603885 TMEM101Q96IK0 257 aa11.65□□□□□ -0.54
CCDC12-208ENST00000603885 BTF3L4Q96K17 158 aa11.65□□□□□ -0.54
CCDC12-208ENST00000603885 TMEM242Q9NWH2 141 aa11.65□□□□□ -0.54
CCDC12-208ENST00000603885 NAT8BQ9UHF3 227 aa11.65□□□□□ -0.54
CCDC12-208ENST00000603885 C9JQL5 133 aa11.64□□□□□ -0.55
CCDC12-208ENST00000603885 RPS10P46783 165 aaKnown RBP11.64□□□□□ -0.55
CCDC12-208ENST00000603885 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.64□□□□□ -0.55
CCDC12-208ENST00000603885 IGHV3-64A0A075B6Q5 118 aa11.63□□□□□ -0.55
CCDC12-208ENST00000603885 TRBV27A0A0K0K1C4 114 aa11.63□□□□□ -0.55
CCDC12-208ENST00000603885 ESDP10768 282 aa11.63□□□□□ -0.55
CCDC12-208ENST00000603885 POLR2KP53803 58 aaKnown RBP11.63□□□□□ -0.55
CCDC12-208ENST00000603885 C15orf56Q8N910 161 aa11.63□□□□□ -0.55
CCDC12-208ENST00000603885 SMDT1Q9H4I9 107 aa11.63□□□□□ -0.55
CCDC12-208ENST00000603885 J3QL48 77 aa11.62□□□□□ -0.55
CCDC12-208ENST00000603885 PPP1R17O96001 155 aa11.62□□□□□ -0.55
CCDC12-208ENST00000603885 KRTAP10-4P60372 401 aaPredicted RBP11.62□□□□□ -0.55
CCDC12-208ENST00000603885 SRSF3P84103 164 aaKnown RBP11.62□□□□□ -0.55
CCDC12-208ENST00000603885 OR5A1Q8NGJ0 315 aa11.62□□□□□ -0.55
CCDC12-208ENST00000603885 SMKR1H3BMG3 65 aa11.61□□□□□ -0.55
CCDC12-208ENST00000603885 SLPIP03973 132 aa11.61□□□□□ -0.55
CCDC12-208ENST00000603885 SMIM27A0A1W2PRY6 76 aa11.6□□□□□ -0.55
CCDC12-208ENST00000603885 C7orf77A4D0Y5 90 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms