RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 A0A096LPF7 62 aa12.93□□□□□ -0.34
SSBP4-212ENST00000601919 NUPR2A6NF83 97 aa12.93□□□□□ -0.34
SSBP4-212ENST00000601919 LINC01549A6NIU2 74 aa12.93□□□□□ -0.34
SSBP4-212ENST00000601919 S100A2P29034 98 aa12.93□□□□□ -0.34
SSBP4-212ENST00000601919 LINC00310P59036 64 aa12.93□□□□□ -0.34
SSBP4-212ENST00000601919 SNRPEP62304 92 aaKnown RBP12.93□□□□□ -0.34
SSBP4-212ENST00000601919 PRKDCP78527 4128 aaKnown RBP12.93□□□□□ -0.34
SSBP4-212ENST00000601919 C5orf52A6NGY3 159 aa12.92□□□□□ -0.34
SSBP4-212ENST00000601919 AMTP48728 403 aa12.92□□□□□ -0.34
SSBP4-212ENST00000601919 TMEM18Q96B42 140 aa12.92□□□□□ -0.34
SSBP4-212ENST00000601919 KLK5Q9Y337 293 aaPredicted RBP12.92□□□□□ -0.34
SSBP4-212ENST00000601919 TRBV25-1A0A075B6N4 114 aa12.91□□□□□ -0.34
SSBP4-212ENST00000601919 IGHV1-24A0A0C4DH33 117 aa12.91□□□□□ -0.34
SSBP4-212ENST00000601919 IGLL5B9A064 214 aa12.91□□□□□ -0.34
SSBP4-212ENST00000601919 NUPR1O60356 82 aa12.91□□□□□ -0.34
SSBP4-212ENST00000601919 HBDP02042 147 aa12.91□□□□□ -0.34
SSBP4-212ENST00000601919 CEMP1Q6PRD7 247 aaPredicted RBP12.91□□□□□ -0.34
SSBP4-212ENST00000601919 FBN3Q75N90 2809 aa12.91□□□□□ -0.34
SSBP4-212ENST00000601919 BTF3P20290 206 aaKnown RBP12.9□□□□□ -0.34
SSBP4-212ENST00000601919 TIRAPP58753 221 aa12.9□□□□□ -0.34
SSBP4-212ENST00000601919 TRBV6-8A0A0A6YYG3 113 aa12.89□□□□□ -0.35
SSBP4-212ENST00000601919 SMAGPQ0VAQ4 97 aa12.89□□□□□ -0.35
SSBP4-212ENST00000601919 HIST3H2BBQ8N257 126 aa12.89□□□□□ -0.35
SSBP4-212ENST00000601919 DEFB104AQ8WTQ1 72 aa12.89□□□□□ -0.35
SSBP4-212ENST00000601919 PACRGQ96M98 296 aaPredicted RBP12.89□□□□□ -0.35
SSBP4-212ENST00000601919 TMEM243Q9BU79 118 aa12.89□□□□□ -0.35
SSBP4-212ENST00000601919 CYSLTR1Q9Y271 337 aa12.89□□□□□ -0.35
SSBP4-212ENST00000601919 PMCHL1Q16048 86 aa12.88□□□□□ -0.35
SSBP4-212ENST00000601919 PDZD11Q5EBL8 140 aa12.88□□□□□ -0.35
SSBP4-212ENST00000601919 FAM19A2Q8N3H0 131 aa12.88□□□□□ -0.35
SSBP4-212ENST00000601919 C20orf203Q8NBC4 194 aa12.88□□□□□ -0.35
SSBP4-212ENST00000601919 H7C423 109 aa12.87□□□□□ -0.35
SSBP4-212ENST00000601919 UBE2L6O14933 153 aa12.87□□□□□ -0.35
SSBP4-212ENST00000601919 TCTAP57738 103 aa12.87□□□□□ -0.35
SSBP4-212ENST00000601919 C2orf66Q6UXQ4 117 aa12.87□□□□□ -0.35
SSBP4-212ENST00000601919 NTM-AS1Q6ZSK4 140 aa12.87□□□□□ -0.35
SSBP4-212ENST00000601919 CHCHD7Q9BUK0 85 aa12.87□□□□□ -0.35
SSBP4-212ENST00000601919 LELP1Q5T871 98 aa12.86□□□□□ -0.35
SSBP4-212ENST00000601919 LYPD5Q6UWN5 251 aa12.86□□□□□ -0.35
SSBP4-212ENST00000601919 TOMM6Q96B49 74 aa12.86□□□□□ -0.35
SSBP4-212ENST00000601919 WWC2-AS2Q96NR7 200 aa12.86□□□□□ -0.35
SSBP4-212ENST00000601919 HSPB8Q9UJY1 196 aa12.86□□□□□ -0.35
SSBP4-212ENST00000601919 LEPROTL1O95214 131 aa12.85□□□□□ -0.35
SSBP4-212ENST00000601919 PKIAP61925 76 aa12.85□□□□□ -0.35
SSBP4-212ENST00000601919 A0A096LNJ9 63 aa12.84□□□□□ -0.35
SSBP4-212ENST00000601919 TRAV8-6A0A0B4J262 113 aa12.84□□□□□ -0.35
SSBP4-212ENST00000601919 CHCHD5Q9BSY4 110 aa12.84□□□□□ -0.35
SSBP4-212ENST00000601919 ATP5LO75964 103 aa12.83□□□□□ -0.36
SSBP4-212ENST00000601919 MUC7Q8TAX7 377 aa12.83□□□□□ -0.36
SSBP4-212ENST00000601919 SCGB3A1Q96QR1 104 aa12.83□□□□□ -0.36
SSBP4-212ENST00000601919 SPANXA1Q9NS26 97 aa12.83□□□□□ -0.36
SSBP4-212ENST00000601919 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.82□□□□□ -0.36
SSBP4-212ENST00000601919 IGKV2-29A2NJV5 120 aaPredicted RBP12.82□□□□□ -0.36
SSBP4-212ENST00000601919 FABP4P15090 132 aa12.82□□□□□ -0.36
SSBP4-212ENST00000601919 CCL18P55774 89 aa12.82□□□□□ -0.36
SSBP4-212ENST00000601919 RPL39P62891 51 aaKnown RBP12.82□□□□□ -0.36
SSBP4-212ENST00000601919 AMMECR1LQ6DCA0 310 aa12.82□□□□□ -0.36
SSBP4-212ENST00000601919 ERASQ7Z444 233 aa12.82□□□□□ -0.36
SSBP4-212ENST00000601919 HIST1H2BLQ99880 126 aa12.82□□□□□ -0.36
SSBP4-212ENST00000601919 TIMM21Q9BVV7 248 aa12.82□□□□□ -0.36
SSBP4-212ENST00000601919 NPSP0C0P6 89 aa12.81□□□□□ -0.36
SSBP4-212ENST00000601919 ESRGQ1W209 222 aa12.81□□□□□ -0.36
SSBP4-212ENST00000601919 TMEM141Q96I45 108 aa12.81□□□□□ -0.36
SSBP4-212ENST00000601919 PYGO1Q9Y3Y4 419 aa12.81□□□□□ -0.36
SSBP4-212ENST00000601919 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.8□□□□□ -0.36
SSBP4-212ENST00000601919 ZNF25P17030 456 aaPredicted RBP12.8□□□□□ -0.36
SSBP4-212ENST00000601919 PAPPA-AS1Q5QFB9 102 aa12.8□□□□□ -0.36
SSBP4-212ENST00000601919 DGAT2L7PQ6IED9 249 aa12.8□□□□□ -0.36
SSBP4-212ENST00000601919 TMEM101Q96IK0 257 aa12.8□□□□□ -0.36
SSBP4-212ENST00000601919 TIMM17AQ99595 171 aa12.8□□□□□ -0.36
SSBP4-212ENST00000601919 APLNQ9ULZ1 77 aa12.8□□□□□ -0.36
SSBP4-212ENST00000601919 TMEM262E9PQX1 116 aa12.79□□□□□ -0.36
SSBP4-212ENST00000601919 FGF6P10767 208 aa12.79□□□□□ -0.36
SSBP4-212ENST00000601919 GAGE6Q13070 117 aa12.79□□□□□ -0.36
SSBP4-212ENST00000601919 MRPL52Q86TS9 123 aaKnown RBP12.79□□□□□ -0.36
SSBP4-212ENST00000601919 IFI27L1Q96BM0 104 aa12.79□□□□□ -0.36
SSBP4-212ENST00000601919 UBE2D4Q9Y2X8 147 aa12.79□□□□□ -0.36
SSBP4-212ENST00000601919 CSDC2Q9Y534 153 aaKnown RBP12.79□□□□□ -0.36
SSBP4-212ENST00000601919 IGIPA6NJ69 53 aa12.78□□□□□ -0.36
SSBP4-212ENST00000601919 OR5A1Q8NGJ0 315 aa12.78□□□□□ -0.36
SSBP4-212ENST00000601919 MAP1LC3CQ9BXW4 147 aa12.78□□□□□ -0.36
SSBP4-212ENST00000601919 IFITM10A6NMD0 228 aa12.77□□□□□ -0.37
SSBP4-212ENST00000601919 ZFAND6Q6FIF0 208 aa12.77□□□□□ -0.37
SSBP4-212ENST00000601919 Q6ZN92 141 aa12.77□□□□□ -0.37
SSBP4-212ENST00000601919 MRPS16Q9Y3D3 137 aaKnown RBP12.77□□□□□ -0.37
SSBP4-212ENST00000601919 A0A087WX48 190 aa12.76□□□□□ -0.37
SSBP4-212ENST00000601919 A0A1B0GUV1 79 aa12.75□□□□□ -0.37
SSBP4-212ENST00000601919 MRPS36P82909 103 aaKnown RBP12.75□□□□□ -0.37
SSBP4-212ENST00000601919 PRSS1P07477 247 aa12.74□□□□□ -0.37
SSBP4-212ENST00000601919 LINC00173Q6ZV60 143 aa12.74□□□□□ -0.37
SSBP4-212ENST00000601919 LINC00588Q9Y4M8 146 aa12.74□□□□□ -0.37
SSBP4-212ENST00000601919 IGLV4-3A0A075B6K6 122 aa12.73□□□□□ -0.37
SSBP4-212ENST00000601919 C3orf84H3BNL1 204 aa12.73□□□□□ -0.37
SSBP4-212ENST00000601919 KRTDAPP60985 99 aa12.73□□□□□ -0.37
SSBP4-212ENST00000601919 UBE2DNLQ8IWF7 75 aa12.73□□□□□ -0.37
SSBP4-212ENST00000601919 OR10D4PQ8NGN7 298 aa12.73□□□□□ -0.37
SSBP4-212ENST00000601919 VCX2Q9H322 139 aa12.73□□□□□ -0.37
SSBP4-212ENST00000601919 RBX1P62877 108 aa12.72□□□□□ -0.37
SSBP4-212ENST00000601919 TEX43Q6ZNM6 134 aa12.72□□□□□ -0.37
SSBP4-212ENST00000601919 ZNF664Q8N3J9 261 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms