RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 RBMY1EA6NEQ0 496 aaKnown RBP8.5□□□□□ -1.05
ARHGEF1-220ENST00000600274 C11orf86A6NJI1 115 aa8.5□□□□□ -1.05
ARHGEF1-220ENST00000600274 RBMY1DP0C7P1 496 aaKnown RBP8.5□□□□□ -1.05
ARHGEF1-220ENST00000600274 WFDC10AQ9H1F0 79 aa8.5□□□□□ -1.05
ARHGEF1-220ENST00000600274 ATRQ13535 2644 aa8.49□□□□□ -1.05
ARHGEF1-220ENST00000600274 F8W1H4 67 aa8.49□□□□□ -1.05
ARHGEF1-220ENST00000600274 H3BMM0 161 aa8.49□□□□□ -1.05
ARHGEF1-220ENST00000600274 PPP1R17O96001 155 aa8.49□□□□□ -1.05
ARHGEF1-220ENST00000600274 CRYGDP07320 174 aa8.49□□□□□ -1.05
ARHGEF1-220ENST00000600274 MAP6D1Q9H9H5 199 aa8.49□□□□□ -1.05
ARHGEF1-220ENST00000600274 SPANXB1Q9NS25 103 aaPredicted RBP8.49□□□□□ -1.05
ARHGEF1-220ENST00000600274 TRGV11A0A075B6L2 103 aa8.49□□□□□ -1.05
ARHGEF1-220ENST00000600274 HERVK_113P61574 105 aa8.49□□□□□ -1.05
ARHGEF1-220ENST00000600274 A0A0U1RRA0 63 aa8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 FSHBP01225 129 aa8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 RPL35AP18077 110 aaKnown RBP8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 STHQ8IWL8 128 aa8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 NEXN-AS1Q8NBZ9 246 aa8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 TNFRSF18Q9Y5U5 241 aa8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 TMEM89A2RUT3 159 aa8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 LGALS9O00182 355 aa8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 MED14OSP0DP75 135 aa8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 E9PLD3 99 aa8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 LGALS3P17931 250 aaKnown RBP8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 KRTAP1-3Q8IUG1 177 aa8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 ZMAT4Q9H898 229 aa8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 ZNF580Q9UK33 172 aa8.48□□□□□ -1.05
ARHGEF1-220ENST00000600274 M0QY20 66 aa8.47□□□□□ -1.05
ARHGEF1-220ENST00000600274 CCL24O00175 119 aa8.47□□□□□ -1.05
ARHGEF1-220ENST00000600274 CITED1Q99966 193 aa8.47□□□□□ -1.05
ARHGEF1-220ENST00000600274 TRBV7-9A0A0J9YWB2 115 aa8.47□□□□□ -1.05
ARHGEF1-220ENST00000600274 C9orf85Q96MD7 179 aa8.47□□□□□ -1.05
ARHGEF1-220ENST00000600274 TRGV1A0A0A0MS02 117 aa8.47□□□□□ -1.05
ARHGEF1-220ENST00000600274 POLR2KP53803 58 aaKnown RBP8.47□□□□□ -1.05
ARHGEF1-220ENST00000600274 DEFB114Q30KQ6 69 aa8.47□□□□□ -1.05
ARHGEF1-220ENST00000600274 C4orf3Q8WVX3 66 aa8.47□□□□□ -1.05
ARHGEF1-220ENST00000600274 LINC01546A6NGU7 62 aa8.46□□□□□ -1.05
ARHGEF1-220ENST00000600274 TSHBP01222 138 aa8.46□□□□□ -1.05
ARHGEF1-220ENST00000600274 SCGB1A1P11684 91 aa8.46□□□□□ -1.05
ARHGEF1-220ENST00000600274 MORN3Q6PF18 240 aaPredicted RBP8.46□□□□□ -1.05
ARHGEF1-220ENST00000600274 TRPT1Q86TN4 253 aaKnown RBP8.46□□□□□ -1.05
ARHGEF1-220ENST00000600274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.46□□□□□ -1.06
ARHGEF1-220ENST00000600274 IGKV2-29A2NJV5 120 aaPredicted RBP8.46□□□□□ -1.06
ARHGEF1-220ENST00000600274 PMVKQ15126 192 aa8.46□□□□□ -1.06
ARHGEF1-220ENST00000600274 HIGD1BQ9P298 99 aa8.46□□□□□ -1.06
ARHGEF1-220ENST00000600274 C9JAW5 83 aa8.45□□□□□ -1.06
ARHGEF1-220ENST00000600274 TM2D2Q9BX73 214 aa8.45□□□□□ -1.06
ARHGEF1-220ENST00000600274 VCX2Q9H322 139 aa8.45□□□□□ -1.06
ARHGEF1-220ENST00000600274 A0A0J9YXV3 536 aa8.45□□□□□ -1.06
ARHGEF1-220ENST00000600274 Q6ZSN1 163 aa8.45□□□□□ -1.06
ARHGEF1-220ENST00000600274 SPXQ9BT56 116 aa8.45□□□□□ -1.06
ARHGEF1-220ENST00000600274 LRRC75A-AS1Q8N1F1 130 aa8.44□□□□□ -1.06
ARHGEF1-220ENST00000600274 ZNF415Q09FC8 603 aa8.44□□□□□ -1.06
ARHGEF1-220ENST00000600274 TRAV12-1A0A0B4J245 112 aa8.44□□□□□ -1.06
ARHGEF1-220ENST00000600274 A8MWV9 139 aa8.44□□□□□ -1.06
ARHGEF1-220ENST00000600274 I3L3M4 83 aa8.44□□□□□ -1.06
ARHGEF1-220ENST00000600274 J3QKU1 62 aa8.44□□□□□ -1.06
ARHGEF1-220ENST00000600274 NXPH4O95158 308 aa8.44□□□□□ -1.06
ARHGEF1-220ENST00000600274 INSP01308 110 aa8.44□□□□□ -1.06
ARHGEF1-220ENST00000600274 ZNRF2Q8NHG8 242 aa8.43□□□□□ -1.06
ARHGEF1-220ENST00000600274 ODF3L2Q3SX64 289 aa8.43□□□□□ -1.06
ARHGEF1-220ENST00000600274 FOXI1Q12951 378 aa8.42□□□□□ -1.06
ARHGEF1-220ENST00000600274 DGAT2L7PQ6IED9 249 aa8.42□□□□□ -1.06
ARHGEF1-220ENST00000600274 AKAP9Q99996 3911 aa8.42□□□□□ -1.06
ARHGEF1-220ENST00000600274 IGIPA6NJ69 53 aa8.42□□□□□ -1.06
ARHGEF1-220ENST00000600274 M0R2P5 195 aa8.42□□□□□ -1.06
ARHGEF1-220ENST00000600274 ODF3Q96PU9 254 aa8.42□□□□□ -1.06
ARHGEF1-220ENST00000600274 IGKV3OR2-268A0A0C4DH90 116 aa8.42□□□□□ -1.06
ARHGEF1-220ENST00000600274 TRBV27A0A0K0K1C4 114 aa8.42□□□□□ -1.06
ARHGEF1-220ENST00000600274 LINC01006Q8NI28 216 aa8.42□□□□□ -1.06
ARHGEF1-220ENST00000600274 VWFP04275 2813 aa8.42□□□□□ -1.06
ARHGEF1-220ENST00000600274 PDZD2O15018 2839 aa8.41□□□□□ -1.06
ARHGEF1-220ENST00000600274 TEP1Q99973 2627 aaKnown RBP8.41□□□□□ -1.06
ARHGEF1-220ENST00000600274 PLA2G2AP14555 144 aa8.41□□□□□ -1.06
ARHGEF1-220ENST00000600274 MRPL23Q16540 153 aaKnown RBP8.41□□□□□ -1.06
ARHGEF1-220ENST00000600274 TEX29Q8N6K0 151 aa8.41□□□□□ -1.06
ARHGEF1-220ENST00000600274 IGLV4-69A0A075B6H9 119 aa8.41□□□□□ -1.06
ARHGEF1-220ENST00000600274 TSPEAR-AS2P59090 65 aa8.41□□□□□ -1.06
ARHGEF1-220ENST00000600274 TTC32Q5I0X7 151 aa8.41□□□□□ -1.06
ARHGEF1-220ENST00000600274 LYRM7Q5U5X0 104 aa8.41□□□□□ -1.06
ARHGEF1-220ENST00000600274 TSPAN13O95857 204 aa8.41□□□□□ -1.06
ARHGEF1-220ENST00000600274 A8MZ25 164 aa8.4□□□□□ -1.06
ARHGEF1-220ENST00000600274 XGP55808 180 aa8.4□□□□□ -1.06
ARHGEF1-220ENST00000600274 C20orf203Q8NBC4 194 aa8.4□□□□□ -1.06
ARHGEF1-220ENST00000600274 TCL1BO95988 128 aa8.4□□□□□ -1.07
ARHGEF1-220ENST00000600274 RNF152Q8N8N0 203 aa8.4□□□□□ -1.07
ARHGEF1-220ENST00000600274 NOP10Q9NPE3 64 aaKnown RBP8.4□□□□□ -1.07
ARHGEF1-220ENST00000600274 OTOGQ6ZRI0 2925 aa8.4□□□□□ -1.07
ARHGEF1-220ENST00000600274 TRAV8-3A0A0A6YYJ7 113 aa8.39□□□□□ -1.07
ARHGEF1-220ENST00000600274 ZNF625Q96I27 306 aaPredicted RBP8.39□□□□□ -1.07
ARHGEF1-220ENST00000600274 C1QTNF4Q9BXJ3 329 aa8.39□□□□□ -1.07
ARHGEF1-220ENST00000600274 TRBV7-3A0A075B6L6 115 aa8.39□□□□□ -1.07
ARHGEF1-220ENST00000600274 CFAP126Q5VTH2 177 aa8.39□□□□□ -1.07
ARHGEF1-220ENST00000600274 Q6ZTI0 123 aa8.39□□□□□ -1.07
ARHGEF1-220ENST00000600274 TMEM141Q96I45 108 aa8.39□□□□□ -1.07
ARHGEF1-220ENST00000600274 TRGV2A0A075B6R0 118 aa8.39□□□□□ -1.07
ARHGEF1-220ENST00000600274 A4D1N5 150 aa8.39□□□□□ -1.07
ARHGEF1-220ENST00000600274 ERG28Q9UKR5 140 aa8.39□□□□□ -1.07
ARHGEF1-220ENST00000600274 GAGE12JA6NER3 117 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 J3QQQ9 107 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms