RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 AMTP48728 403 aa14.87□□□□□ -0.03
CCDC9-204ENST00000599398 PEA15Q15121 130 aa14.87□□□□□ -0.03
CCDC9-204ENST00000599398 TMEM70Q9BUB7 260 aa14.87□□□□□ -0.03
CCDC9-204ENST00000599398 C9JQL5 133 aa14.86□□□□□ -0.03
CCDC9-204ENST00000599398 HLA-DQA1P01909 254 aa14.86□□□□□ -0.03
CCDC9-204ENST00000599398 HAMPP81172 84 aa14.86□□□□□ -0.03
CCDC9-204ENST00000599398 SRSF3P84103 164 aaKnown RBP14.86□□□□□ -0.03
CCDC9-204ENST00000599398 ISOC2Q96AB3 205 aa14.86□□□□□ -0.03
CCDC9-204ENST00000599398 PRR34Q9NV39 138 aa14.86□□□□□ -0.03
CCDC9-204ENST00000599398 FAM231BA6NCW3 169 aa14.85□□□□□ -0.03
CCDC9-204ENST00000599398 RPL23P62829 140 aaKnown RBP14.85□□□□□ -0.03
CCDC9-204ENST00000599398 ADIRFQ15847 76 aa14.85□□□□□ -0.03
CCDC9-204ENST00000599398 V9GYV3 84 aa14.85□□□□□ -0.03
CCDC9-204ENST00000599398 EPM2AB3EWF7 344 aa14.84□□□□□ -0.03
CCDC9-204ENST00000599398 NAT8Q9UHE5 227 aa14.84□□□□□ -0.03
CCDC9-204ENST00000599398 REG3AQ06141 175 aa14.83□□□□□ -0.04
CCDC9-204ENST00000599398 C14orf177Q52M58 125 aa14.83□□□□□ -0.04
CCDC9-204ENST00000599398 C20orf203Q8NBC4 194 aa14.83□□□□□ -0.04
CCDC9-204ENST00000599398 IGLV4-60A0A075B6I1 120 aa14.82□□□□□ -0.04
CCDC9-204ENST00000599398 A0A1B0GUV1 79 aa14.82□□□□□ -0.04
CCDC9-204ENST00000599398 TMEM191AQ9H0A3 160 aa14.82□□□□□ -0.04
CCDC9-204ENST00000599398 FAM30AQ9NZY2 134 aa14.82□□□□□ -0.04
CCDC9-204ENST00000599398 SDHAF1A6NFY7 115 aa14.81□□□□□ -0.04
CCDC9-204ENST00000599398 SMR3BP02814 79 aaPredicted RBP14.81□□□□□ -0.04
CCDC9-204ENST00000599398 LINC01620Q4KN68 170 aa14.81□□□□□ -0.04
CCDC9-204ENST00000599398 SMDT1Q9H4I9 107 aa14.81□□□□□ -0.04
CCDC9-204ENST00000599398 IGLV10-54A0A075B6I4 117 aa14.8□□□□□ -0.04
CCDC9-204ENST00000599398 USP17L23D6RBM5 183 aa14.8□□□□□ -0.04
CCDC9-204ENST00000599398 RIGQ13278 110 aa14.8□□□□□ -0.04
CCDC9-204ENST00000599398 NUP35Q8NFH5 326 aa14.8□□□□□ -0.04
CCDC9-204ENST00000599398 APCSP02743 223 aa14.79□□□□□ -0.04
CCDC9-204ENST00000599398 NAT8BQ9UHF3 227 aa14.79□□□□□ -0.04
CCDC9-204ENST00000599398 NCR2O95944 276 aa14.78□□□□□ -0.04
CCDC9-204ENST00000599398 PMCHP20382 165 aa14.78□□□□□ -0.04
CCDC9-204ENST00000599398 Q5VSD8 79 aa14.78□□□□□ -0.04
CCDC9-204ENST00000599398 AMN1Q8IY45 258 aa14.78□□□□□ -0.04
CCDC9-204ENST00000599398 GAS8-AS1O95177 125 aa14.77□□□□□ -0.05
CCDC9-204ENST00000599398 RAB4AP20338 218 aa14.77□□□□□ -0.05
CCDC9-204ENST00000599398 AMMECR1LQ6DCA0 310 aa14.77□□□□□ -0.05
CCDC9-204ENST00000599398 RNF185Q96GF1 192 aa14.77□□□□□ -0.05
CCDC9-204ENST00000599398 ST20Q9HBF5 79 aa14.77□□□□□ -0.05
CCDC9-204ENST00000599398 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.76□□□□□ -0.05
CCDC9-204ENST00000599398 TRAV8-4A0A0B4J246 113 aa14.76□□□□□ -0.05
CCDC9-204ENST00000599398 TRBV6-5A0A0K0K1A5 114 aa14.76□□□□□ -0.05
CCDC9-204ENST00000599398 IGKV2-29A2NJV5 120 aaPredicted RBP14.76□□□□□ -0.05
CCDC9-204ENST00000599398 I3L3M4 83 aa14.76□□□□□ -0.05
CCDC9-204ENST00000599398 KRTAP26-1Q6PEX3 210 aa14.76□□□□□ -0.05
CCDC9-204ENST00000599398 MRAP2Q96G30 205 aa14.76□□□□□ -0.05
CCDC9-204ENST00000599398 FAT1Q14517 4588 aa14.76□□□□□ -0.05
CCDC9-204ENST00000599398 DNAH8Q96JB1 4490 aa14.76□□□□□ -0.05
CCDC9-204ENST00000599398 RNASEKQ6P5S7 137 aaKnown RBP14.75□□□□□ -0.05
CCDC9-204ENST00000599398 IGKV3OR2-268A0A0C4DH90 116 aa14.74□□□□□ -0.05
CCDC9-204ENST00000599398 SMIM27A0A1W2PRY6 76 aa14.73□□□□□ -0.05
CCDC9-204ENST00000599398 FAM229AH3BQW9 127 aa14.73□□□□□ -0.05
CCDC9-204ENST00000599398 RPS10P46783 165 aaKnown RBP14.73□□□□□ -0.05
CCDC9-204ENST00000599398 Q6ZSA8 131 aa14.73□□□□□ -0.05
CCDC9-204ENST00000599398 SMKR1H3BMG3 65 aa14.72□□□□□ -0.05
CCDC9-204ENST00000599398 H7C423 109 aa14.72□□□□□ -0.05
CCDC9-204ENST00000599398 PRSS1P07477 247 aa14.72□□□□□ -0.05
CCDC9-204ENST00000599398 RAB14P61106 215 aa14.72□□□□□ -0.05
CCDC9-204ENST00000599398 TMEM242Q9NWH2 141 aa14.72□□□□□ -0.05
CCDC9-204ENST00000599398 FGF6P10767 208 aa14.71□□□□□ -0.05
CCDC9-204ENST00000599398 CAMPP49913 170 aa14.71□□□□□ -0.05
CCDC9-204ENST00000599398 TSHBP01222 138 aa14.7□□□□□ -0.06
CCDC9-204ENST00000599398 POLR2KP53803 58 aaKnown RBP14.69□□□□□ -0.06
CCDC9-204ENST00000599398 BTF3L4Q96K17 158 aa14.69□□□□□ -0.06
CCDC9-204ENST00000599398 INAFM2P0DMQ5 153 aa14.68□□□□□ -0.06
CCDC9-204ENST00000599398 CLRN3Q8NCR9 226 aa14.68□□□□□ -0.06
CCDC9-204ENST00000599398 TRBV27A0A0K0K1C4 114 aa14.67□□□□□ -0.06
CCDC9-204ENST00000599398 A0A1B0GW15 77 aa14.67□□□□□ -0.06
CCDC9-204ENST00000599398 PPP1R17O96001 155 aa14.67□□□□□ -0.06
CCDC9-204ENST00000599398 ZNF25P17030 456 aaPredicted RBP14.67□□□□□ -0.06
CCDC9-204ENST00000599398 FAM104BQ5XKR9 115 aa14.67□□□□□ -0.06
CCDC9-204ENST00000599398 DGAT2L7PQ6IED9 249 aa14.67□□□□□ -0.06
CCDC9-204ENST00000599398 MRPL54Q6P161 138 aaKnown RBP14.67□□□□□ -0.06
CCDC9-204ENST00000599398 TMEM101Q96IK0 257 aa14.67□□□□□ -0.06
CCDC9-204ENST00000599398 VPS13BQ7Z7G8 4022 aa14.67□□□□□ -0.06
CCDC9-204ENST00000599398 hDV102S1A0JD36 115 aa14.66□□□□□ -0.06
CCDC9-204ENST00000599398 GAGE12HA6NDE8 117 aa14.66□□□□□ -0.06
CCDC9-204ENST00000599398 ESDP10768 282 aa14.66□□□□□ -0.06
CCDC9-204ENST00000599398 MRPL51Q4U2R6 128 aaKnown RBP14.66□□□□□ -0.06
CCDC9-204ENST00000599398 SCXQ7RTU7 201 aa14.66□□□□□ -0.06
CCDC9-204ENST00000599398 VCYO14598 125 aa14.65□□□□□ -0.06
CCDC9-204ENST00000599398 FCER1GP30273 86 aa14.65□□□□□ -0.06
CCDC9-204ENST00000599398 SUMO2P61956 95 aaKnown RBP14.65□□□□□ -0.06
CCDC9-204ENST00000599398 NRACQ8N912 160 aa14.65□□□□□ -0.06
CCDC9-204ENST00000599398 S100A8P05109 93 aa14.64□□□□□ -0.07
CCDC9-204ENST00000599398 HBBP68871 147 aa14.64□□□□□ -0.07
CCDC9-204ENST00000599398 OR5A1Q8NGJ0 315 aa14.64□□□□□ -0.07
CCDC9-204ENST00000599398 CHAC1Q9BUX1 264 aa14.64□□□□□ -0.07
CCDC9-204ENST00000599398 C7orf77A4D0Y5 90 aa14.63□□□□□ -0.07
CCDC9-204ENST00000599398 CKS2P33552 79 aa14.63□□□□□ -0.07
CCDC9-204ENST00000599398 CHCHD10Q8WYQ3 142 aaPredicted RBP14.63□□□□□ -0.07
CCDC9-204ENST00000599398 AP5S1Q9NUS5 200 aa14.63□□□□□ -0.07
CCDC9-204ENST00000599398 SRRM2Q9UQ35 2752 aaKnown RBP14.63□□□□□ -0.07
CCDC9-204ENST00000599398 PPP1R2P9O14990 202 aa14.62□□□□□ -0.07
CCDC9-204ENST00000599398 LINC00528Q8N1L1 170 aa14.62□□□□□ -0.07
CCDC9-204ENST00000599398 C9orf163Q8N9P6 203 aa14.62□□□□□ -0.07
CCDC9-204ENST00000599398 KIR2DL4Q99706 377 aa14.62□□□□□ -0.07
CCDC9-204ENST00000599398 LINC00862A6NCI5 91 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms